Entry: PS00121

General information about the entry

Entry name [info] COLIPASE_1
Accession [info] PS00121
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00111

Name and characterization of the entry

Description [info] Colipase signature.
Pattern [info]
Y-x(2)-Y-Y-x-C-x-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 13 in 13 different sequences
Number of true positive hits 12 in 12 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 4
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 92.31 %
Recall (true positives / (true positives + false negatives)) 75.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] interfacial_binding at position 1
Site [info] interfacial_binding at position 3
Site [info] interfacial_binding at position 4
Site [info] disulfide at position 6
Site [info] disulfide at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
12 sequences

COLA_HORSE  (P02704), COLB_HORSE  (P02705), COL_BOVIN   (A0JNQ7), 
COL_CANFA   (P19090), COL_HUMAN   (P04118), COL_MOUSE   (Q9CQC2), 
COL_MYOCO   (P42889), COL_PIG     (P02703), COL_RABIT   (P42890), 
COL_RAT     (P17084), COL_SPETR   (Q91XL7), COL_XENTR   (A9JSD6)
» More

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

COLL1_HUMAN (A2RUU4), COLL2_HUMAN (Q6UWE3), COLL2_MOUSE (Q3UW21), 
COLL2_RAT   (D3ZVN1)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

COL_CHICK   (P11148), COL_SQUAC   (P11149)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

YLOH_SCHPO  (Q9URY3)

		
PDB
[Detailed view]
6 PDB

1ETH; 1LPA; 1LPB; 1N8S; 1PCN; 1PCO

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