Entry: PS00159

General information about the entry
Entry name ALDOLASE_KDPG_KHG_1
Accession number PS00159
Entry type PATTERN
Date APR-1990 (CREATED); NOV-1995 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00144
Associated ProRule PRU10118
Name and characterization of the entry
DescriptionKDPG and KHG aldolases active site.
Pattern G-[LIVM]-x(3)-E-[LIV]-T-[LF]-R.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 18 hits in 18 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 10 hits in 10 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 8 hits in 8 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 55.56 %
  • Recall (true hits / (true hits + false negatives)): 90.91 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 8,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ALKD_PSEAE  (O68283), ALKD_PSEPU  (P00885), ALKH_DICD3  (P38448), 
ALKH_ECO57  (P0A957), ALKH_ECOL6  (P0A956), ALKH_ECOLI  (P0A955), 
ALKH_HAEIN  (P44480), ALKH_SHIFL  (P0A958), ALKH_TREPA  (O83578), 
ALKH_ZYMMO  (Q00384)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
ALKH_BACSU  (P50846)
False positive hits (sequences which do not belong to the set under consideration):
CBPC2_MOUSE (Q8CDK2), CBPC2_XENTR (Q0P4M4), NALP5_BOVIN (Q647I9), 
PP347_ARATH (Q9SMZ2), PRMC_THEEB  (Q8DHV7), TLR4_CRIGR  (Q9WV82), 
TLR4_MOUSE  (Q9QUK6), TLR4_RAT    (Q9QX05)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1EUA; 1EUN; 1FQ0; 1FWR; 1MXS; 1VHC;

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