Entry: PS00161

General information about the entry

Entry name [info] ISOCITRATE_LYASE
Accession [info] PS00161
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2001 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00145
Associated ProRule [info] PRU10119

Name and characterization of the entry

Description [info] Isocitrate lyase signature.
Pattern [info]
K-[KR]-C-G-H-[LMQR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 70 in 70 different sequences
Number of true positive hits 68 in 68 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 7
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 97.14 %
Recall (true positives / (true positives + false negatives)) 90.67 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
68 sequences

ACEA1_MYCBO (P0A5H4), ACEA1_MYCTE (H8EVV4), ACEA1_MYCTO (P9WKK6), 
ACEA1_SOYBN (P45456), ACEA2_MYCBO (Q7TZA8), ACEA2_MYCTE (H8F3R6), 
ACEA2_MYCTO (Q8VJU4), ACEA2_SOYBN (P45457), ACEAA_MYCTU (O07718), 
ACEA_ARATH  (P28297), ACEA_ASHGO  (O94198), ACEA_ASPFU  (Q6T267), 
ACEA_BACHD  (Q9K9H0), ACEA_BRANA  (P25248), ACEA_CANAX  (Q9P8Q7), 
ACEA_CANGA  (Q6FPK7), ACEA_CANTR  (P20014), ACEA_COCIM  (Q96TP5), 
ACEA_COPC7  (A8NR45), ACEA_COPCI  (O13439), ACEA_COREF  (Q8RQN6), 
ACEA_CORGL  (P42449), ACEA_CUCMA  (P93110), ACEA_CUCSA  (P49296), 
ACEA_CYBJA  (Q9HFN2), ACEA_DEBHA  (Q6BRY4), ACEA_DENCR  (Q9SE26), 
ACEA_ECOL6  (P0A9G7), ACEA_ECOLI  (P0A9G6), ACEA_EMENI  (P28298), 
ACEA_GIBZE  (Q4HYR2), ACEA_GOSHI  (P17069), ACEA_KLULA  (Q8NJ72), 
ACEA_LEPMC  (Q86ZF1), ACEA_MAGO7  (P0CT06), ACEA_MAGOY  (L7HUY5), 
ACEA_MYCLE  (P46831), ACEA_MYCTU  (P9WKK7), ACEA_NEUCR  (P28299), 
ACEA_ORYSJ  (Q6Z6M4), ACEA_PENMA  (Q96WZ5), ACEA_PICPA  (Q9C124), 
ACEA_PINTA  (Q43097), ACEA_RHOFA  (P41554), ACEA_RICCO  (P15479), 
ACEA_SALTY  (P51066), ACEA_SOLLC  (P49297), ACEA_YARLI  (P41555), 
ACEA_YEAST  (P28240), ACEB_EMENI  (C8V9Y5), ACEB_HYPAI  (G9NNY7), 
ACEB_YARLI  (Q6BZP5), ACEB_YEAST  (Q12031), CPPM_ARATH  (O49290), 
CPPM_STRHY  (P11435), DML_EUBBA   (Q0QLE4), GCP_CAEEL   (Q10663), 
PDP_DIACA   (Q05957), PRPB1_CORGL (Q8NSH8), PRPB2_CORGL (Q8NSL2), 
PRPB_AERPE  (Q9YFM7), PRPB_BACHD  (Q9Z9T7), PRPB_BACSU  (P54528), 
PRPB_CUPNE  (Q937P0), PRPB_ECOLI  (P77541), PRPB_SALTY  (Q56062), 
PRPB_SHEON  (Q8EJW1), PRPB_VIBCH  (Q9KSC2)
» More

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

ACEA_PSEAE  (Q9I0K4), ACEB_SCHPO  (Q9P6J1), PEPM_MYTED  (P56839), 
PEPM_STRHY  (P29247), PEPM_STRVR  (O86937), PEPM_TETPY  (P33182), 
PPHA_VARSP  (Q84G06)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

ACEA_ACICA  (P28467), ACEA_HELAN  (P20699)

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

KLKB1_BOVIN (Q2KJ63), SYL_ANAMM   (Q5PB38)

		
PDB
[Detailed view]
6 PDB

1F61; 1F8M; 1IGW; 1MUM; 1OQF; 1ZLP

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