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Entry: PS00161

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General information about the entry

Entry name [info] ISOCITRATE_LYASE
Accession [info] PS00161
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2001 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00145
Associated ProRule [info] PRU10119

Name and characterization of the entry

Description [info] Isocitrate lyase signature.
Pattern [info]
K-[KR]-C-G-H-[LMQR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 60 in 60 different sequences
Number of true positive hits 58 in 58 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 7
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 96.67 %
Recall (true positives / (true positives + false negatives)) 89.23 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
58 sequences

ACEA1_SOYBN (P45456), ACEA2_SOYBN (P45457), ACEA_ARATH  (P28297), 
ACEA_ASHGO  (O94198), ACEA_ASPFU  (Q6T267), ACEA_BACHD  (Q9K9H0), 
ACEA_BRANA  (P25248), ACEA_CANAX  (Q9P8Q7), ACEA_CANGA  (Q6FPK7), 
ACEA_CANTR  (P20014), ACEA_COCIM  (Q96TP5), ACEA_COPC7  (A8NR45), 
ACEA_COPCI  (O13439), ACEA_COREF  (Q8RQN6), ACEA_CORGL  (P42449), 
ACEA_CUCMA  (P93110), ACEA_CUCSA  (P49296), ACEA_CYBJA  (Q9HFN2), 
ACEA_DEBHA  (Q6BRY4), ACEA_DENCR  (Q9SE26), ACEA_ECOL6  (P0A9G7), 
ACEA_ECOLI  (P0A9G6), ACEA_EMENI  (P28298), ACEA_GIBZE  (Q4HYR2), 
ACEA_GOSHI  (P17069), ACEA_KLULA  (Q8NJ72), ACEA_LEPMC  (Q86ZF1), 
ACEA_MAGO7  (P0CT06), ACEA_MAGOY  (L7HUY5), ACEA_MYCBO  (P0A5H4), 
ACEA_MYCLE  (P46831), ACEA_MYCTO  (P9WKK6), ACEA_MYCTU  (P9WKK7), 
ACEA_NEUCR  (P28299), ACEA_PENMA  (Q96WZ5), ACEA_PICPA  (Q9C124), 
ACEA_PINTA  (Q43097), ACEA_RHOFA  (P41554), ACEA_RICCO  (P15479), 
ACEA_SALTY  (P51066), ACEA_SOLLC  (P49297), ACEA_YARLI  (P41555), 
ACEA_YEAST  (P28240), ACEB_EMENI  (C8V9Y5), ACEB_YEAST  (Q12031), 
CPPM_ARATH  (O49290), CPPM_STRHY  (P11435), DML_EUBBA   (Q0QLE4), 
GCP_CAEEL   (Q10663), PDP_DIACA   (Q05957), PRPB1_CORGL (Q8NSH8), 
PRPB2_CORGL (Q8NSL2), PRPB_AERPE  (Q9YFM7), PRPB_BACHD  (Q9Z9T7), 
PRPB_BACSU  (P54528), PRPB_ECOLI  (P77541), PRPB_SALTY  (Q56062), 
PRPB_VIBCH  (Q9KSC2)
» More

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

ACEA_PSEAE  (Q9I0K4), ACEB_SCHPO  (Q9P6J1), PEPM_MYTED  (P56839), 
PEPM_STRHY  (P29247), PEPM_STRVR  (O86937), PEPM_TETPY  (P33182), 
PPHA_VARSP  (Q84G06)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

ACEA_ACICA  (P28467), ACEA_HELAN  (P20699)

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

KLKB1_BOVIN (Q2KJ63), SYL_ANAMM   (Q5PB38)

		
PDB
[Detailed view]
6 PDB

1F61; 1F8M; 1IGW; 1MUM; 1OQF; 1ZLP

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