Entry: PS00181

Forthcoming changes to the profile format
General information about the entry

Entry name [info] GLNA_ATP
Accession [info] PS00181
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00162

Name and characterization of the entry

Description [info] Glutamine synthetase putative ATP-binding region signature.
Pattern [info]
K-P-[LIVMFYA]-x(3,5)-[NPAT]-[GA]-[GSTAN]-[GA]-x-H-x(3)-S.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 165 in 165 different sequences
Number of true positive hits 165 in 165 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 10
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.29 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
165 sequences

3HAPM_CUPPJ (Q46ZL2), GLN11_ARATH (Q56WN1), GLN11_ORYSJ (P14656), 
GLN12_ARATH (Q8LCE1), GLN12_ORYSJ (P14654), GLN13_ARATH (Q9LVI8), 
GLN13_ORYSJ (Q4W8D0), GLN14_ARATH (Q9FMD9), GLN15_ARATH (Q8GXW5), 
GLNA1_ALNGL (O04867), GLNA1_BRADU (P05457), GLNA1_CHLRE (Q42688), 
GLNA1_DAUCA (O22504), GLNA1_DROME (P20477), GLNA1_FRAAL (P46033), 
GLNA1_LOTJA (Q42899), GLNA1_MAIZE (P38559), GLNA1_MEDSA (P04078), 
GLNA1_MYCBO (P0A591), GLNA1_MYCS2 (A0R079), GLNA1_MYCTO (P9WN38), 
GLNA1_MYCTU (P9WN39), GLNA1_PEA   (P08282), GLNA1_PHAVU (P04770), 
GLNA1_RHILV (P09826), GLNA1_RHIME (Q59747), GLNA1_SOYBN (P24099), 
GLNA1_STRFL (P77958), GLNA1_STRVR (Q05542), GLNA1_VITVI (P51118), 
GLNA2_ARATH (Q43127), GLNA2_BRADU (P04772), GLNA2_CHLRE (Q42689), 
GLNA2_DAUCA (O22506), GLNA2_DROME (P20478), GLNA2_FRAAL (P20805), 
GLNA2_HORVU (P13564), GLNA2_MAIZE (P38560), GLNA2_MEDSA (Q9XQ94), 
GLNA2_MYCBO (P64246), GLNA2_MYCS2 (A0R083), GLNA2_MYCTO (P9WN36), 
GLNA2_MYCTU (P9WN37), GLNA2_ORYSJ (P14655), GLNA2_PEA   (P08281), 
GLNA2_PHAVU (P04771), GLNA2_RHILP (Q02154), GLNA2_RHIML (P45626), 
GLNA2_SOYBN (O82560), GLNA2_STRHY (P22878), GLNA2_STRVR (P19432), 
GLNA2_VITVI (P51119), GLNA3_DICDI (Q54WR9), GLNA3_HORVU (Q06378), 
GLNA3_LUPAN (P14636), GLNA3_MAIZE (P38561), GLNA3_MEDSA (Q43785), 
GLNA3_PEA   (P07694), GLNA3_PHAVU (P00965), GLNA3_RHILP (P31592), 
GLNA3_RHIME (O87393), GLNA4_MAIZE (P38562), GLNA4_PEA   (Q43066), 
GLNA4_PHAVU (P15102), GLNA5_MAIZE (P38563), GLNAC_BRANA (Q42624), 
GLNAC_MAIZE (P25462), GLNA_ACIFR  (P07804), GLNA_ACOCA  (Q9QY94), 
GLNA_AGABI  (O00088), GLNA_AMAMU  (Q8X169), GLNA_ARCFU  (O29313), 
GLNA_ASHGO  (Q75BT9), GLNA_AZOBR  (P10583), GLNA_AZOC5  (P94126), 
GLNA_AZOVI  (P22248), GLNA_BACCE  (P19064), GLNA_BACFR  (P15623), 
GLNA_BACSU  (P12425), GLNA_BOVIN  (P15103), GLNA_BUTFI  (Q05650), 
GLNA_CANFA  (Q8HZM5), GLNA_CANGA  (Q6FMT6), GLNA_CHICK  (P16580), 
GLNA_CLOSA  (P10656), GLNA_COLGL  (Q12613), GLNA_CRIGR  (P04773), 
GLNA_CRYNB  (P0CN85), GLNA_CRYNJ  (P0CN84), GLNA_DEBHA  (Q6B4U7), 
GLNA_DUNSA  (P11600), GLNA_ECO57  (P0A9C7), GLNA_ECOL6  (P0A9C6), 
GLNA_ECOLI  (P0A9C5), GLNA_EMENI  (Q96V52), GLNA_FUSSH  (Q9UUN6), 
GLNA_HAEIN  (P43794), GLNA_HALSA  (Q9HNI2), GLNA_HALVD  (P43386), 
GLNA_HEBCY  (Q96UV5), GLNA_HELPJ  (Q9ZLW5), GLNA_HELPY  (P94845), 
GLNA_HUMAN  (P15104), GLNA_KLULA  (Q874T6), GLNA_LACDE  (P45627), 
GLNA_LACLA  (Q9CDL9), GLNA_LACSA  (P23712), GLNA_LUPLU  (P52782), 
GLNA_MACFA  (Q4R7U3), GLNA_METCA  (P15124), GLNA_METJA  (Q60182), 
GLNA_METMP  (O59648), GLNA_METTH  (O27612), GLNA_METVO  (P21154), 
GLNA_MICDP  (P33035), GLNA_MIMIV  (Q5UR44), GLNA_MOUSE  (P15105), 
GLNA_NEIGO  (P25821), GLNA_NEUCR  (Q86ZF9), GLNA_NICPL  (P12424), 
GLNA_NOSS1  (P00964), GLNA_PANAR  (Q04831), GLNA_PASMU  (Q9CLP2), 
GLNA_PIG    (P46410), GLNA_PINSY  (P52783), GLNA_PROHU  (P28786), 
GLNA_PSEAE  (Q9HU65), GLNA_PYRAB  (Q9UY99), GLNA_PYRFU  (Q05907), 
GLNA_PYRHO  (O58097), GLNA_PYRWO  (P36687), GLNA_RAT    (P09606), 
GLNA_RHOCA  (P13499), GLNA_RHOSH  (P43518), GLNA_SALTI  (P0A1P7), 
GLNA_SALTY  (P0A1P6), GLNA_SCHPO  (Q09179), GLNA_SHIFL  (P0A9C8), 
GLNA_SQUAC  (P41320), GLNA_STAAC  (Q5HGC3), GLNA_STAAM  (P60890), 
GLNA_STAAN  (P99095), GLNA_STAAR  (Q6GHC6), GLNA_STAAS  (Q6G9Q4), 
GLNA_STAAU  (P0A040), GLNA_STAAW  (P0A039), GLNA_STAEQ  (Q5HPN2), 
GLNA_STAES  (Q8CSR8), GLNA_STRCO  (P15106), GLNA_SUIBO  (Q8J1R3), 
GLNA_SULAC  (Q9HH09), GLNA_SULSO  (P23794), GLNA_SYNP2  (P28605), 
GLNA_SYNY3  (P77961), GLNA_THEKO  (O08467), GLNA_THEMA  (P36205), 
GLNA_TRITH  (P51120), GLNA_TUBBO  (Q86ZU6), GLNA_VIBAL  (P19904), 
GLNA_VIBCH  (Q9KNJ2), GLNA_VIGAC  (P32289), GLNA_XENLA  (P51121), 
GLNA_YARLI  (Q6C3E0), GLNA_YEAST  (P32288), PUUA_ECOLI  (P78061)
» More

UniProtKB/Swiss-Prot
False negative sequences
10 sequences

GLNA1_DICDI (Q86B00), GLNA2_DICDI (P0C7B6), GLNA_AQUAE  (O66514), 
GLNA_CAEEL  (P34497), GLNA_GIBFU  (Q9C2U9), LGSN_CANFA  (Q1ZZS1), 
LGSN_HUMAN  (Q5TDP6), LGSN_MOUSE  (Q8CIX8), LGSN_RABIT  (Q0GA40), 
LGSN_RAT    (Q7TT51)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

GLNA2_EMIHU (P81643), GLNA2_PINPS (P81107), GLNA_PHOLP  (P20479), 
GLNA_VITSX  (P85087)
» More

PDB
[Detailed view]
27 PDB

1F1H; 1F52; 1FPY; 1HTO; 1HTQ; 1LGR; 2BVC; 2D3A; 2D3B; 2D3C; 2GLS; 2LGS; 2OJW; 2QC8; 2UU7; 2WGS; 2WHI; 3FKY; 3NG0; 3ZXR; 3ZXV; 4ACF; 4LNF; 4LNI; 4LNK; 4LNN; 4LNO
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission