We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
PROSITE entry PS00183
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View entry in raw text format (no links)
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PURL: https://purl.expasy.org/prosite/signature/PS00183
Direct ScanProsite submission
General information about the entry
| Entry name [info] | UBC_1 |
| Accession [info] | PS00183 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00163 |
| Associated ProRule [info] | PRU10133 |
Name and characterization of the entry
| Description [info] | Ubiquitin-conjugating (UBC) active site signature. |
| Pattern [info] |
[FYWLSP]-H-[PC]-[NHL]-[LIV]-x(3,4)-G-x-[LIVP]-C-[LIV]-x(1,2)-[LIVR]. |
Numerical results [info]
| Total number of hits | 242 in 242 different sequences |
| Number of true positive hits | 242 in 242 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 81 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 74.92 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Site [info] | active_site at position 10 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
242 sequences
PEX4_ARATH (Q8LGF7), PEX4_KOMPG (C4R826), PEX4_PICPA (P49428), RCE1_ARATH (Q9SDY5), SCE1_ARATH (Q42551), U2D2B_MOUSE (Q6ZWY6), U2D2B_RAT (P70711), UB12L_ARATH (Q9ZU75), UB2D1_BOVIN (Q2TA10), UB2D1_HUMAN (P51668), UB2D1_MOUSE (P61080), UB2D1_RAT (D3ZDK2), UB2D2_BOVIN (Q1RMX2), UB2D2_HUMAN (P62837), UB2D2_MOUSE (P62838), UB2D2_PIG (Q06AA9), UB2D2_RAT (P62839), UB2D2_XENLA (P62840), UB2D3_HUMAN (P61077), UB2D3_MACFA (Q4R5N4), UB2D3_MOUSE (P61079), UB2D3_PONAB (Q5R4V7), UB2D3_RAT (P61078), UB2D4_HUMAN (Q9Y2X8), UB2D4_XENLA (A5PKP9), UB2E1_HUMAN (P51965), UB2E1_MOUSE (P52482), UB2E2_HUMAN (Q96LR5), UB2E2_MOUSE (Q91W82), UB2E3_BOVIN (Q2T9X7), UB2E3_HUMAN (Q969T4), UB2E3_MOUSE (P52483), UB2FA_MOUSE (Q9CY34), UB2FB_MOUSE (Q3UWQ3), UB2G1_HUMAN (P62253), UB2G1_MACFA (Q4R5Y8), UB2G1_MOUSE (P62254), UB2G1_RAT (P62255), UB2G2_BOVIN (Q17QG5), UB2G2_HUMAN (P60604), UB2G2_MOUSE (P60605), UB2G2_PONAB (Q5RF84), UB2L3_BOVIN (Q3MHP1), UB2L3_HUMAN (P68036), UB2L3_MOUSE (P68037), UB2L3_PONAB (Q5R5I4), UB2L5_HUMAN (A0A1B0GUS4), UB2L6_BOVIN (A5PJC4), UB2L6_HUMAN (O14933), UB2L6_MOUSE (Q9QZU9), UB2L6_RAT (Q4V8J2), UB2R1_HUMAN (P49427), UB2R1_MOUSE (Q8CFI2), UB2R2_HUMAN (Q712K3), UB2R2_MOUSE (Q6ZWZ2), UB2R2_RABIT (Q29503), UB2SA_XENLA (A1L3K1), UB2SB_XENLA (Q8AVU2), UB2SC_XENLA (Q76EZ2), UBC10_ARATH (P35133), UBC10_DROME (Q7K738), UBC11_ARATH (P35134), UBC11_SCHPO (O00103), UBC11_YEAST (P52492), UBC12_ARATH (Q9C9Y7), UBC12_BOVIN (A3KN22), UBC12_CAEEL (Q9XVK5), UBC12_CANGA (Q6FVQ8), UBC12_DICDI (Q54TI6), UBC12_EREGS (Q75AF2), UBC12_HUMAN (P61081), UBC12_KLULA (Q6CSW8), UBC12_MOUSE (P61082), UBC12_SCHPO (O74549), UBC12_XENLA (Q6DCZ9), UBC12_XENTR (Q6P8D9), UBC12_YARLI (Q6C9W0), UBC12_YEAST (P52491), UBC13_ARATH (Q42541), UBC13_CAEEL (Q95XX0), UBC13_SCHPO (O13685), UBC13_YEAST (P52490), UBC14_ARATH (P42747), UBC15_ARATH (P42743), UBC15_SCHPO (Q9Y818), UBC16_ARATH (Q9FWT2), UBC17_ARATH (O23239), UBC18_ARATH (Q9FMM0), UBC19_ARATH (Q9LJZ5), UBC1_ARATH (P25865), UBC1_CAEEL (P52478), UBC1_COLGL (O74196), UBC1_PYRO7 (Q9UVR2), UBC1_SCHPO (O74810), UBC1_YEAST (P21734), UBC20_ARATH (Q8L7T3), UBC21_CAEEL (P52484), UBC22_ARATH (Q9FF66), UBC27_ARATH (Q9FI61), UBC28_ARATH (Q94F47), UBC29_ARATH (Q9SLE4), UBC2M_DROME (Q9VSF3), UBC2_ARATH (P42745), UBC2_ASPFU (Q4WLA7), UBC2_CAEEL (P35129), UBC2_CANAL (O74201), UBC2_CANGA (Q6FR76), UBC2_CRYNB (P0CS17), UBC2_CRYNJ (P0CS16), UBC2_DEBHA (Q6BU36), UBC2_DICDI (Q553F3), UBC2_EMENI (Q96UP5), UBC2_EREGS (Q75EB8), UBC2_FUSSL (P78717), UBC2_KLULA (Q6CUD9), UBC2_MEDSA (P35130), UBC2_MYCMD (Q4PFA5), UBC2_NEUCR (P52493), UBC2_SCHPO (P23566), UBC2_TRIHA (Q58FS2), UBC2_WHEAT (P25866), UBC2_YARLI (Q6C093), UBC2_YEAST (P06104), UBC30_ARATH (Q9FKT3), UBC35_ARATH (Q94A97), UBC36_ARATH (Q9FZ48), UBC37_ARATH (Q941B6), UBC3_ARATH (P42746), UBC3_YEAST (P14682), UBC4_ARATH (P42748), UBC4_CANAX (P43102), UBC4_SCHPO (P46595), UBC4_SOLLC (P35135), UBC4_WHEAT (P16577), UBC4_YEAST (P15731), UBC5A_ORYSJ (Q8S920), UBC5B_ORYSJ (Q8S919), UBC5_ARATH (P42749), UBC5_YEAST (P15732), UBC6_ARATH (P42750), UBC7_ARATH (Q42540), UBC7_CAEEL (P34477), UBC7_SCHPO (O00102), UBC7_WHEAT (P25868), UBC7_YEAST (Q02159), UBC84_DROME (P52487), UBC8_ARATH (P35131), UBC8_SCHPO (Q9P7R4), UBC8_YEAST (P28263), UBC9A_DANRE (Q9W6H5), UBC9B_DANRE (Q9DDJ0), UBC9_ARATH (P35132), UBC9_CAEEL (Q95017), UBC9_CHICK (P63283), UBC9_DICDI (Q9NGP4), UBC9_HUMAN (P63279), UBC9_ICTTR (Q2EF73), UBC9_MESAU (O09181), UBC9_MOUSE (P63280), UBC9_PAGMA (Q6Y1Z4), UBC9_RAT(P63281), UBC9_SCHPO (P40984), UBC9_XENLA (P63282), UBC9_XENTR (Q28CQ4), UBC9_YEAST (P50623), UBCD1_DROME (P25867), UBCD2_DROME (P52485), UBCD4_DROME (P52486), UBCD6_DROME (P25153), UBCX_DICDI (Q86IZ3), UBCX_PICAN (O60015), UBCX_YEAST (P29340), UBC_ASFB7 (P27949), UBC_ASFK5 (P0C8G3), UBC_ASFM2 (P25869), UBC_ASFP4 (P0C8G4), UBC_ASFWA (P0C8G5), UBE2A_HUMAN (P49459), UBE2A_MOUSE (Q9Z255), UBE2B_BOVIN (Q32P99), UBE2B_HUMAN (P63146), UBE2B_MOUSE (P63147), UBE2B_RABIT (P63148), UBE2B_RAT (P63149), UBE2C_BOVIN (Q32PA5), UBE2C_DICDI (Q54XS6), UBE2C_DROME (Q9VTY6), UBE2C_HUMAN (O00762), UBE2C_MACFA (Q4R9D1), UBE2C_MOUSE (Q9D1C1), UBE2C_SPISO (Q95044), UBE2C_XENLA (P56616), UBE2F_BOVIN (Q1RMW1), UBE2F_CHICK (Q5ZKX6), UBE2F_DANRE (Q6NY82), UBE2F_HUMAN (Q969M7), UBE2F_RAT (Q5U203), UBE2F_XENLA (Q6IRC7), UBE2F_XENTR (Q5M8Y2), UBE2H_BOVIN (Q32LN1), UBE2H_HUMAN (P62256), UBE2H_MOUSE (P62257), UBE2K_BOVIN (P61085), UBE2K_HUMAN (P61086), UBE2K_MOUSE (P61087), UBE2N_BOVIN (Q0P5K3), UBE2N_DICDI (Q86K32), UBE2N_DROME (P35128), UBE2N_HUMAN (P61088), UBE2N_MACFA (Q4R4I1), UBE2N_MOUSE (P61089), UBE2N_PONAB (Q5R7J6), UBE2N_RAT (Q9EQX9), UBE2S_AQUCT (C1C3R6), UBE2S_BOVIN (Q1RML1), UBE2S_BRAFL (C3Z724), UBE2S_DANRE (Q4V908), UBE2S_DICDI (Q54I43), UBE2S_DROAN (B3MQV3), UBE2S_DROER (B3NWW9), UBE2S_DROGR (B4JKB7), UBE2S_DROME (Q9VX25), UBE2S_DROMO (B4L7V4), UBE2S_DROPE (B4H9W2), UBE2S_DROPS (B5DKM4), UBE2S_DROSE (B4IF39), UBE2S_DROSI (B4R6G1), UBE2S_DROVI (B4MA02), UBE2S_DROWI (B4N208), UBE2S_DROYA (B4Q2J2), UBE2S_HUMAN (Q16763), UBE2S_MOUSE (Q921J4), UBE2S_NEMVE (A7SE05), UBE2S_RAT (B5DFI8), UBE2S_XENTR (Q28F89), UBE2T_BOVIN (Q32LD2), UBE2T_DANRE (Q08BH7), UBE2T_HUMAN (Q9NPD8), UBE2T_MOUSE (Q9CQ37), UBE2T_XENLA (Q7ZY08), UBE2U_HUMAN (Q5VVX9), UBE2U_MACFA (Q95LM1)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
81 sequences
BIRC6_HUMAN (Q9NR09), BIRC6_MOUSE (O88738), COP10_ARATH (Q9LJD7), MMS2_SCHPO (O74983), MMS2_YEAST (P53152), U2D2L_HUMAN (Q8IWF7), U2QL1_DROME (Q9VM35), U2QL1_HUMAN (A1L167), U2QL1_MOUSE (A0PJN4), UB2J1_HUMAN (Q9Y385), UB2J1_MOUSE (Q9JJZ4), UB2J2_BOVIN (Q2TA03), UB2J2_DICDI (Q54LP7), UB2J2_HUMAN (Q8N2K1), UB2J2_MOUSE (Q6P073), UB2JL_DICDI (Q54AK6), UB2Q1_HUMAN (Q7Z7E8), UB2Q1_MOUSE (Q7TSS2), UB2Q2_BOVIN (Q32L27), UB2Q2_HUMAN (Q8WVN8), UB2Q2_MOUSE (Q8K2Z8), UB2Q2_RABIT (Q7YQJ9), UB2V1_BOVIN (Q3SZ52), UB2V1_CHICK (Q90879), UB2V1_HUMAN (Q13404), UB2V1_MOUSE (Q9CZY3), UB2V1_PONAB (Q5R4Z6), UB2V2_BOVIN (Q3SZ43), UB2V2_CHICK (Q5F3Z3), UB2V2_DANRE (Q6PEH5), UB2V2_HUMAN (Q15819), UB2V2_MOUSE (Q9D2M8), UB2V2_PONAB (Q5R6C9), UB2V2_RAT (Q7M767), UB2V2_XENLA (Q7ZYP0), UB2WA_DANRE (Q4VBH4), UBC14_SCHPO (Q9UTN8), UBC16_SCHPO (Q9P6I1), UBC17_CAEEL (Q11076), UBC18_CAEEL (Q21633), UBC1_MIMIV (Q5UQC9), UBC23_ARATH (Q9ZVX1), UBC24_ARATH (Q8VY10), UBC25_ARATH (Q9LUQ5), UBC25_CAEEL (Q93571), UBC26_ARATH (Q8GY87), UBC31_ARATH (Q9C8X7), UBC32_ARATH (Q9LSP7), UBC33_ARATH (Q9FK29), UBC34_ARATH (Q9SHI7), UBC38_ARATH (Q9C918), UBC39_ARATH (F4HPP7), UBC3_MIMIV (Q5UQ88), UBC4_MIMIV (Q5UQ40), UBC6_CANGA (Q6FQK7), UBC6_DEBHA (Q6BYG4), UBC6_EREGS (Q74Z34), UBC6_KLULA (Q6CMG6), UBC6_SCHPO (O42646), UBC6_YEAST (P33296), UBCB_DICDI (Q94490), UBE2O_HUMAN (Q9C0C9), UBE2O_MOUSE (Q6ZPJ3), UBE2V_DICDI (Q54D06), UBE2W_BOVIN (A6H795), UBE2W_CAEEL (Q9XWF6), UBE2W_HUMAN (Q96B02), UBE2W_MOUSE (Q8VDW4), UBE2W_RAT (B5DEI4), UBE2Z_DANRE (Q6DG60), UBE2Z_HUMAN (Q9H832), UBE2Z_MOUSE (Q3UE37), UBE2Z_RAT (Q3B7D1), UBE2Z_XENLA (Q6PCF7), UBE2Z_XENTR (Q66KB0), UE2NL_HUMAN (Q5JXB2), UEV1A_ARATH (Q93YP0), UEV1B_ARATH (Q9CAB6), UEV1C_ARATH (Q9SJ44), UEV1D_ARATH (Q9SVD7), Y1A1_ENCCU (Q8SSK3)» more |
| PDB [Detailed view] |
299 PDB
pdb_00001a3s; pdb_00001ayz; pdb_00001c4z; pdb_00001fbv; pdb_00001fxt; pdb_00001fzy; pdb_00001j7d; pdb_00001jas; pdb_00001jat; pdb_00001jbb; pdb_00001kps; pdb_00001pzv; pdb_00001q34; pdb_00001qcq; pdb_00001tte; pdb_00001u9a; pdb_00001u9b; pdb_00001ur6; pdb_00001w4u; pdb_00001wzv; pdb_00001wzw; pdb_00001x23; pdb_00001y6l; pdb_00001y8x; pdb_00001yh2; pdb_00001yla; pdb_00001yrv; pdb_00001z2u; pdb_00001z3d; pdb_00001z5s; pdb_00001zdn; pdb_00002aak; pdb_00002awf; pdb_00002bep; pdb_00002bf8; pdb_00002c2v; pdb_00002c4p; pdb_00002clw; pdb_00002cyx; pdb_00002e2c; pdb_00002edi; pdb_00002eke; pdb_00002esk; pdb_00002eso; pdb_00002esp; pdb_00002esq; pdb_00002fuh; pdb_00002gjd; pdb_00002grn; pdb_00002grp; pdb_00002grq; pdb_00002grr; pdb_00002kjh; pdb_00002kly; pdb_00002lxp; pdb_00002o25; pdb_00002ob4; pdb_00002pe6; pdb_00002px9; pdb_00002ucz; pdb_00002vrr; pdb_00002xwu; pdb_00002y4w; pdb_00002y9m; pdb_00002y9p; pdb_00002yb6; pdb_00002ybf; pdb_00002yho; pdb_00002z5d; pdb_00003a4s; pdb_00003bzh; pdb_00003e46; pdb_00003eb6; pdb_00003f92; pdb_00003fn1; pdb_00003fsh; pdb_00003h8k; pdb_00003hct; pdb_00003hcu; pdb_00003k9o; pdb_00003k9p; pdb_00003l1y; pdb_00003l1z; pdb_00003o2u; pdb_00003oj4; pdb_00003ong; pdb_00003ptf; pdb_00003rcz; pdb_00003rpg; pdb_00003rz3; pdb_00003sqv; pdb_00003sy2; pdb_00003tgd; pdb_00003uin; pdb_00003uio; pdb_00003uip; pdb_00003von; pdb_00003w31; pdb_00004a49; pdb_00004a4b; pdb_00004a4c; pdb_00004ccg; pdb_00004dhi; pdb_00004dhj; pdb_00004dhz; pdb_00004ii2; pdb_00004ip3; pdb_00004jqu; pdb_00004lad; pdb_00004mdk; pdb_00004nr3; pdb_00004nrg; pdb_00004nri; pdb_00004onl; pdb_00004onm; pdb_00004onn; pdb_00004orh; pdb_00004q5e; pdb_00004q5h; pdb_00004qpl; pdb_00004r8p; pdb_00004s3o; pdb_00004tkp; pdb_00004w5v; pdb_00004x57; pdb_00004y1l; pdb_00004yii; pdb_00005a31; pdb_00005aie; pdb_00005bnb; pdb_00005d1k; pdb_00005d1l; pdb_00005d1m; pdb_00005d2m; pdb_00005egg; pdb_00005f6d; pdb_00005f6e; pdb_00005f6u; pdb_00005f6v; pdb_00005f6w; pdb_00005f6x; pdb_00005f6y; pdb_00005fq2; pdb_00005hpt; pdb_00005ifr; pdb_00005jne; pdb_00005khr; pdb_00005knl; pdb_00005l9t; pdb_00005l9u; pdb_00005lbn; pdb_00005ngz; pdb_00005nkz; pdb_00005nl8; pdb_00005ojj; pdb_00005ojw; pdb_00005ywr; pdb_00006cyo; pdb_00006cyr; pdb_00006d4p; pdb_00006d68; pdb_00006d6i; pdb_00006fga; pdb_00006gum; pdb_00006gv3; pdb_00006if1; pdb_00006jky; pdb_00006kfp; pdb_00006kg6; pdb_00006kl4; pdb_00006lp2; pdb_00006m2c; pdb_00006nya; pdb_00006nyd; pdb_00006op8; pdb_00006p5b; pdb_00006q83; pdb_00006qh3; pdb_00006qhk; pdb_00006r75; pdb_00006s96; pdb_00006s98; pdb_00006syf; pdb_00006t7f; pdb_00006ttu; pdb_00006ulh; pdb_00006ump; pdb_00006ums; pdb_00006w7z; pdb_00006w9a; pdb_00006xod; pdb_00006xxu; pdb_00006zhs; pdb_00006zht; pdb_00006zhu; pdb_00007ahf; pdb_00007b5l; pdb_00007b5n; pdb_00007bol; pdb_00007bxg; pdb_00007k5j; pdb_00007kzr; pdb_00007kzs; pdb_00007kzt; pdb_00007kzv; pdb_00007lew; pdb_00007lyb; pdb_00007m2k; pdb_00007mex; pdb_00007mey; pdb_00007myh; pdb_00007oik; pdb_00007p47; pdb_00007uv8; pdb_00007uvc; pdb_00007v8f; pdb_00007w75; pdb_00007w76; pdb_00008b3i; pdb_00008grm; pdb_00008grq; pdb_00008ieg; pdb_00008iej; pdb_00008iya; pdb_00008j1r; pdb_00008juc; pdb_00008jvd; pdb_00008jve; pdb_00008jvl; pdb_00008odr; pdb_00008oif; pdb_00008pql; pdb_00008q7r; pdb_00008r5h; pdb_00008rx0; pdb_00008se9; pdb_00008sea; pdb_00008seb; pdb_00008smw; pdb_00008smx; pdb_00008smy; pdb_00008smz; pdb_00008sn0; pdb_00008sn1; pdb_00008sn2; pdb_00008sn3; pdb_00008sn4; pdb_00008sn5; pdb_00008sn6; pdb_00008sn7; pdb_00008sn8; pdb_00008sn9; pdb_00008sna; pdb_00008sv8; pdb_00008tar; pdb_00008tau; pdb_00008u14; pdb_00008upf; pdb_00008uq8; pdb_00008uq9; pdb_00008v0d; pdb_00008vk8; pdb_00008vk9; pdb_00008x7i; pdb_00008x7j; pdb_00008x7k; pdb_00009b55; pdb_00009b56; pdb_00009b57; pdb_00009b58; pdb_00009b59; pdb_00009b5a; pdb_00009b5b; pdb_00009b5c; pdb_00009b5d; pdb_00009b5e; pdb_00009b5f; pdb_00009b5g; pdb_00009b5h; pdb_00009b5i; pdb_00009b5j; pdb_00009b5k; pdb_00009b5l; pdb_00009b5m; pdb_00009b5n; pdb_00009b5o; pdb_00009b5p; pdb_00009b5q; pdb_00009b5r; pdb_00009b5s; pdb_00009b5t; pdb_00009b5u; pdb_00009b5v; pdb_00009b5w; pdb_00009b5x; pdb_00009b62; pdb_00009biv; pdb_00009ipu; pdb_00009jtc » more |