Entry: PS00183

General information about the entry

Entry name [info] UBIQUITIN_CONJUGAT_1
Accession [info] PS00183
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00163
Associated ProRule [info] PRU10133

Name and characterization of the entry

Description [info] Ubiquitin-conjugating enzymes active site.
Pattern [info]
[FYWLSP]-H-[PC]-[NHL]-[LIV]-x(3,4)-G-x-[LIVP]-C-[LIV]-x(1,2)-[LIVR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 239 in 239 different sequences
Number of true positive hits 239 in 239 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 89
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 72.87 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] active_site at position 10
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
239 sequences

PEX4_ARATH  (Q8LGF7    ), RCE1_ARATH  (Q9SDY5    ), SCE1_ARATH  (Q42551    ), 
U2D2B_MOUSE (Q6ZWY6    ), U2D2B_RAT   (P70711    ), UB12L_ARATH (Q9ZU75    ), 
UB2D1_BOVIN (Q2TA10    ), UB2D1_HUMAN (P51668    ), UB2D1_MOUSE (P61080    ), 
UB2D1_RAT   (D3ZDK2    ), UB2D2_BOVIN (Q1RMX2    ), UB2D2_HUMAN (P62837    ), 
UB2D2_MOUSE (P62838    ), UB2D2_PIG   (Q06AA9    ), UB2D2_RAT   (P62839    ), 
UB2D2_XENLA (P62840    ), UB2D3_HUMAN (P61077    ), UB2D3_MACFA (Q4R5N4    ), 
UB2D3_MOUSE (P61079    ), UB2D3_PONAB (Q5R4V7    ), UB2D3_RAT   (P61078    ), 
UB2D4_HUMAN (Q9Y2X8    ), UB2D4_XENLA (A5PKP9    ), UB2E1_HUMAN (P51965    ), 
UB2E1_MOUSE (P52482    ), UB2E2_HUMAN (Q96LR5    ), UB2E2_MOUSE (Q91W82    ), 
UB2E3_BOVIN (Q2T9X7    ), UB2E3_HUMAN (Q969T4    ), UB2E3_MOUSE (P52483    ), 
UB2FA_MOUSE (Q9CY34    ), UB2FB_MOUSE (Q3UWQ3    ), UB2G1_HUMAN (P62253    ), 
UB2G1_MACFA (Q4R5Y8    ), UB2G1_MOUSE (P62254    ), UB2G1_RAT   (P62255    ), 
UB2G2_BOVIN (Q17QG5    ), UB2G2_HUMAN (P60604    ), UB2G2_MOUSE (P60605    ), 
UB2G2_PONAB (Q5RF84    ), UB2L3_BOVIN (Q3MHP1    ), UB2L3_HUMAN (P68036    ), 
UB2L3_MOUSE (P68037    ), UB2L3_PONAB (Q5R5I4    ), UB2L6_BOVIN (A5PJC4    ), 
UB2L6_HUMAN (O14933    ), UB2L6_MOUSE (Q9QZU9    ), UB2L6_RAT   (Q4V8J2    ), 
UB2R1_HUMAN (P49427    ), UB2R1_MOUSE (Q8CFI2    ), UB2R2_HUMAN (Q712K3    ), 
UB2R2_MOUSE (Q6ZWZ2    ), UB2R2_RABIT (Q29503    ), UB2SA_XENLA (A1L3K1    ), 
UB2SB_XENLA (Q8AVU2    ), UB2SC_XENLA (Q76EZ2    ), UBC10_ARATH (P35133    ), 
UBC11_ARATH (P35134    ), UBC11_SCHPO (O00103    ), UBC11_YEAST (P52492    ), 
UBC12_ARATH (Q9C9Y7    ), UBC12_ASHGO (Q75AF2    ), UBC12_BOVIN (A3KN22    ), 
UBC12_CAEEL (Q9XVK5    ), UBC12_CANGA (Q6FVQ8    ), UBC12_DICDI (Q54TI6    ), 
UBC12_DROME (Q9VSF3    ), UBC12_HUMAN (P61081    ), UBC12_KLULA (Q6CSW8    ), 
UBC12_MOUSE (P61082    ), UBC12_SCHPO (O74549    ), UBC12_XENLA (Q6DCZ9    ), 
UBC12_XENTR (Q6P8D9    ), UBC12_YARLI (Q6C9W0    ), UBC12_YEAST (P52491    ), 
UBC13_ARATH (Q42541    ), UBC13_CAEEL (Q95XX0    ), UBC13_SCHPO (O13685    ), 
UBC13_YEAST (P52490    ), UBC14_ARATH (P42747    ), UBC15_ARATH (P42743    ), 
UBC15_SCHPO (Q9Y818    ), UBC16_ARATH (Q9FWT2    ), UBC17_ARATH (O23239    ), 
UBC18_ARATH (Q9FMM0    ), UBC19_ARATH (Q9LJZ5    ), UBC1_ARATH  (P25865    ), 
UBC1_CAEEL  (P52478    ), UBC1_COLGL  (O74196    ), UBC1_MAGO7  (Q9UVR2    ), 
UBC1_SCHPO  (O74810    ), UBC1_YEAST  (P21734    ), UBC20_ARATH (Q8L7T3    ), 
UBC21_CAEEL (P52484    ), UBC22_ARATH (Q9FF66    ), UBC27_ARATH (Q9FI61    ), 
UBC28_ARATH (Q94F47    ), UBC29_ARATH (Q9SLE4    ), UBC2_ARATH  (P42745    ), 
UBC2_ASHGO  (Q75EB8    ), UBC2_ASPFU  (Q4WLA7    ), UBC2_CAEEL  (P35129    ), 
UBC2_CANAL  (O74201    ), UBC2_CANGA  (Q6FR76    ), UBC2_CRYNB  (P0CS17    ), 
UBC2_CRYNJ  (P0CS16    ), UBC2_DEBHA  (Q6BU36    ), UBC2_DICDI  (Q553F3    ), 
UBC2_EMENI  (Q96UP5    ), UBC2_KLULA  (Q6CUD9    ), UBC2_MEDSA  (P35130    ), 
UBC2_NECHA  (P78717    ), UBC2_NEUCR  (P52493    ), UBC2_SCHPO  (P23566    ), 
UBC2_TRIHA  (Q58FS2    ), UBC2_USTMA  (Q4PFA5    ), UBC2_WHEAT  (P25866    ), 
UBC2_YARLI  (Q6C093    ), UBC2_YEAST  (P06104    ), UBC30_ARATH (Q9FKT3    ), 
UBC35_ARATH (Q94A97    ), UBC36_ARATH (Q9FZ48    ), UBC37_ARATH (Q941B6    ), 
UBC3_ARATH  (P42746    ), UBC3_YEAST  (P14682    ), UBC4_ARATH  (P42748    ), 
UBC4_CANAX  (P43102    ), UBC4_SCHPO  (P46595    ), UBC4_SOLLC  (P35135    ), 
UBC4_WHEAT  (P16577    ), UBC4_YEAST  (P15731    ), UBC5A_ORYSJ (Q8S920    ), 
UBC5B_ORYSJ (Q8S919    ), UBC5_ARATH  (P42749    ), UBC5_YEAST  (P15732    ), 
UBC6_ARATH  (P42750    ), UBC7_ARATH  (Q42540    ), UBC7_CAEEL  (P34477    ), 
UBC7_SCHPO  (O00102    ), UBC7_WHEAT  (P25868    ), UBC7_YEAST  (Q02159    ), 
UBC84_DROME (P52487    ), UBC8_ARATH  (P35131    ), UBC8_SCHPO  (Q9P7R4    ), 
UBC8_YEAST  (P28263    ), UBC9A_DANRE (Q9W6H5    ), UBC9B_DANRE (Q9DDJ0    ), 
UBC9_ARATH  (P35132    ), UBC9_CAEEL  (Q95017    ), UBC9_CHICK  (P63283    ), 
UBC9_DICDI  (Q9NGP4    ), UBC9_HUMAN  (P63279    ), UBC9_ICTTR  (Q2EF73    ), 
UBC9_MESAU  (O09181    ), UBC9_MOUSE  (P63280    ), UBC9_PAGMA  (Q6Y1Z4    ), 
UBC9_RAT    (P63281    ), UBC9_SCHPO  (P40984    ), UBC9_XENLA  (P63282    ), 
UBC9_XENTR  (Q28CQ4    ), UBC9_YEAST  (P50623    ), UBCD1_DROME (P25867    ), 
UBCD2_DROME (P52485    ), UBCD4_DROME (P52486    ), UBCD6_DROME (P25153    ), 
UBCX_DICDI  (Q86IZ3    ), UBCX_PICAN  (O60015    ), UBCX_PICPA  (P49428    ), 
UBCX_YEAST  (P29340    ), UBC_ASFB7   (P27949    ), UBC_ASFK5   (P0C8G3    ), 
UBC_ASFM2   (P25869    ), UBC_ASFP4   (P0C8G4    ), UBC_ASFWA   (P0C8G5    ), 
UBE2A_HUMAN (P49459    ), UBE2A_MOUSE (Q9Z255    ), UBE2B_BOVIN (Q32P99    ), 
UBE2B_HUMAN (P63146    ), UBE2B_MOUSE (P63147    ), UBE2B_RABIT (P63148    ), 
UBE2B_RAT   (P63149    ), UBE2C_BOVIN (Q32PA5    ), UBE2C_DICDI (Q54XS6    ), 
UBE2C_DROME (Q9VTY6    ), UBE2C_HUMAN (O00762    ), UBE2C_MACFA (Q4R9D1    ), 
UBE2C_MOUSE (Q9D1C1    ), UBE2C_SPISO (Q95044    ), UBE2C_XENLA (P56616    ), 
UBE2F_BOVIN (Q1RMW1    ), UBE2F_CHICK (Q5ZKX6    ), UBE2F_DANRE (Q6NY82    ), 
UBE2F_HUMAN (Q969M7    ), UBE2F_RAT   (Q5U203    ), UBE2F_XENLA (Q6IRC7    ), 
UBE2F_XENTR (Q5M8Y2    ), UBE2H_BOVIN (Q32LN1    ), UBE2H_HUMAN (P62256    ), 
UBE2H_MOUSE (P62257    ), UBE2K_BOVIN (P61085    ), UBE2K_HUMAN (P61086    ), 
UBE2K_MOUSE (P61087    ), UBE2N_BOVIN (Q0P5K3    ), UBE2N_DICDI (Q86K32    ), 
UBE2N_DROME (P35128    ), UBE2N_HUMAN (P61088    ), UBE2N_MACFA (Q4R4I1    ), 
UBE2N_MOUSE (P61089    ), UBE2N_PONAB (Q5R7J6    ), UBE2N_RAT   (Q9EQX9    ), 
UBE2S_BOVIN (Q1RML1    ), UBE2S_BRAFL (C3Z724    ), UBE2S_DANRE (Q4V908    ), 
UBE2S_DICDI (Q54I43    ), UBE2S_DROAN (B3MQV3    ), UBE2S_DROER (B3NWW9    ), 
UBE2S_DROGR (B4JKB7    ), UBE2S_DROME (Q9VX25    ), UBE2S_DROMO (B4L7V4    ), 
UBE2S_DROPE (B4H9W2    ), UBE2S_DROPS (B5DKM4    ), UBE2S_DROSE (B4IF39    ), 
UBE2S_DROSI (B4R6G1    ), UBE2S_DROVI (B4MA02    ), UBE2S_DROWI (B4N208    ), 
UBE2S_DROYA (B4Q2J2    ), UBE2S_HUMAN (Q16763    ), UBE2S_LITCT (C1C3R6    ), 
UBE2S_MOUSE (Q921J4    ), UBE2S_NEMVE (A7SE05    ), UBE2S_RAT   (B5DFI8    ), 
UBE2S_XENTR (Q28F89    ), UBE2T_BOVIN (Q32LD2    ), UBE2T_DANRE (Q08BH7    ), 
UBE2T_HUMAN (Q9NPD8    ), UBE2T_MOUSE (Q9CQ37    ), UBE2T_XENLA (Q7ZY08    ), 
UBE2U_HUMAN (Q5VVX9    ), UBE2U_MACFA (Q95LM1    )
» more

UniProtKB/Swiss-Prot
False negative sequences
89 sequences

BIRC6_HUMAN (Q9NR09    ), BIRC6_MOUSE (O88738    ), COP10_ARATH (Q9LJD7    ), 
ELCL_ARATH  (Q9FFY6    ), ELC_ARATH   (Q9LHG8    ), MMS2_SCHPO  (O74983    ), 
MMS2_YEAST  (P53152    ), SST6_SCHPO  (Q7Z992    ), STP22_YEAST (P25604    ), 
TS101_HUMAN (Q99816    ), TS101_MOUSE (Q61187    ), U2D2L_HUMAN (Q8IWF7    ), 
U2QL1_DROME (Q9VM35    ), U2QL1_HUMAN (A1L167    ), U2QL1_MOUSE (A0PJN4    ), 
UB2J1_HUMAN (Q9Y385    ), UB2J1_MOUSE (Q9JJZ4    ), UB2J2_BOVIN (Q2TA03    ), 
UB2J2_DICDI (Q54LP7    ), UB2J2_HUMAN (Q8N2K1    ), UB2J2_MOUSE (Q6P073    ), 
UB2JL_DICDI (Q54AK6    ), UB2Q1_HUMAN (Q7Z7E8    ), UB2Q1_MOUSE (Q7TSS2    ), 
UB2Q2_BOVIN (Q32L27    ), UB2Q2_HUMAN (Q8WVN8    ), UB2Q2_MOUSE (Q8K2Z8    ), 
UB2Q2_RABIT (Q7YQJ9    ), UB2V1_BOVIN (Q3SZ52    ), UB2V1_CHICK (Q90879    ), 
UB2V1_HUMAN (Q13404    ), UB2V1_MOUSE (Q9CZY3    ), UB2V1_PONAB (Q5R4Z6    ), 
UB2V2_BOVIN (Q3SZ43    ), UB2V2_CHICK (Q5F3Z3    ), UB2V2_DANRE (Q6PEH5    ), 
UB2V2_HUMAN (Q15819    ), UB2V2_MOUSE (Q9D2M8    ), UB2V2_PONAB (Q5R6C9    ), 
UB2V2_RAT   (Q7M767    ), UB2V2_XENLA (Q7ZYP0    ), UB2WA_DANRE (Q4VBH4    ), 
UBC14_SCHPO (Q9UTN8    ), UBC16_SCHPO (Q9P6I1    ), UBC17_CAEEL (Q11076    ), 
UBC1_MIMIV  (Q5UQC9    ), UBC23_ARATH (Q9ZVX1    ), UBC24_ARATH (Q8VY10    ), 
UBC25_ARATH (Q9LUQ5    ), UBC25_CAEEL (Q93571    ), UBC26_ARATH (Q8GY87    ), 
UBC31_ARATH (Q9C8X7    ), UBC32_ARATH (Q9LSP7    ), UBC33_ARATH (Q9FK29    ), 
UBC34_ARATH (Q9SHI7    ), UBC38_ARATH (Q9C918    ), UBC39_ARATH (F4HPP7    ), 
UBC3_MIMIV  (Q5UQ88    ), UBC4_MIMIV  (Q5UQ40    ), UBC6_ASHGO  (Q74Z34    ), 
UBC6_CANGA  (Q6FQK7    ), UBC6_DEBHA  (Q6BYG4    ), UBC6_KLULA  (Q6CMG6    ), 
UBC6_SCHPO  (O42646    ), UBC6_YEAST  (P33296    ), UBCB_DICDI  (Q94490    ), 
UBE2O_HUMAN (Q9C0C9    ), UBE2O_MOUSE (Q6ZPJ3    ), UBE2V_DICDI (Q54D06    ), 
UBE2W_BOVIN (A6H795    ), UBE2W_HUMAN (Q96B02    ), UBE2W_MOUSE (Q8VDW4    ), 
UBE2W_RAT   (B5DEI4    ), UBE2Z_DANRE (Q6DG60    ), UBE2Z_HUMAN (Q9H832    ), 
UBE2Z_MOUSE (Q3UE37    ), UBE2Z_RAT   (Q3B7D1    ), UBE2Z_XENLA (Q6PCF7    ), 
UBE2Z_XENTR (Q66KB0    ), UE2NL_HUMAN (Q5JXB2    ), UEV1A_ARATH (Q93YP0    ), 
UEV1B_ARATH (Q9CAB6    ), UEV1C_ARATH (Q9SJ44    ), UEV1D_ARATH (Q9SVD7    ), 
UEVLD_DANRE (Q6DBY5    ), UEVLD_HUMAN (Q8IX04    ), UEVLD_MOUSE (Q3U1V6    ), 
UEVLD_XENTR (Q66KB7    ), Y1A1_ENCCU  (Q8SSK3    )
» more

PDB
[Detailed view]
141 PDB

1A3S; 1AYZ; 1C4Z; 1FBV; 1FXT; 1FZY; 1J7D; 1JAS; 1JAT; 1JBB; 1KPS; 1PZV; 1Q34; 1QCQ; 1TTE; 1U9A; 1U9B; 1UR6; 1W4U; 1WZV; 1WZW; 1X23; 1Y6L; 1Y8X; 1YH2; 1YLA; 1YRV; 1Z2U; 1Z3D; 1Z5S; 1ZDN; 2AAK; 2AWF; 2BEP; 2BF8; 2C2V; 2C4P; 2CLW; 2CYX; 2E2C; 2EDI; 2EKE; 2ESK; 2ESO; 2ESP; 2ESQ; 2FUH; 2GJD; 2GRN; 2GRP; 2GRQ; 2GRR; 2KJH; 2KLY; 2LXP; 2O25; 2OB4; 2PE6; 2PX9; 2UCZ; 2VRR; 2XWU; 2Y4W; 2Y9M; 2Y9P; 2YB6; 2YBF; 2YHO; 2Z5D; 3A4S; 3BZH; 3E46; 3EB6; 3F92; 3FN1; 3FSH; 3H8K; 3HCT; 3HCU; 3K9O; 3K9P; 3L1Y; 3L1Z; 3O2U; 3OJ4; 3ONG; 3PTF; 3RCZ; 3RPG; 3RZ3; 3SQV; 3SY2; 3TGD; 3UIN; 3VON; 3W31; 4A49; 4A4B; 4A4C; 4CCG; 4DHI; 4DHJ; 4DHZ; 4II2; 4IP3; 4JQU; 4LAD; 4MDK; 4NR3; 4NRG; 4NRI; 4ONL; 4ONM; 4ONN; 4ORH; 4Q5E; 4Q5H; 4QPL; 4R8P; 4S3O; 4TKP; 4W5V; 4X57; 4Y1L; 4YII; 5A31; 5AIE; 5BNB; 5D1K; 5D1L; 5D1M; 5D2M; 5F6D; 5F6E; 5F6U; 5F6V; 5F6W; 5F6X; 5F6Y; 5HPT; 5IFR
» more

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