Entry: PS00195

General information about the entry

Entry name [info] GLUTAREDOXIN_1
Accession [info] PS00195
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2001 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00173

Name and characterization of the entry

Description [info] Glutaredoxin active site.
Pattern [info]
[LIVMD]-[FYSA]-x(4)-C-[PV]-[FYWH]-C-x(2)-[TAV]-x(2,3)-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 71 in 71 different sequences
Number of true positive hits 68 in 68 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 40
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 95.77 %
Recall (true positives / (true positives + false negatives)) 62.96 %

Comments [info]

Taxonomic range [info] Archaea, Bacteriophages, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] disulfide at position 4
Site [info] disulfide at position 7
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
68 sequences

GLRX1_BOVIN (P10575    ), GLRX1_CAMPM (Q8V2V1    ), GLRX1_CAMPS (Q775X4    ), 
GLRX1_CHICK (P79764    ), GLRX1_CWPXB (Q8QMY9    ), GLRX1_CWPXG (Q80E01    ), 
GLRX1_ECOLI (P68688    ), GLRX1_ECTVM (Q8JLF5    ), GLRX1_HUMAN (P35754    ), 
GLRX1_MOUSE (Q9QUH0    ), GLRX1_PIG   (P12309    ), GLRX1_RABIT (P12864    ), 
GLRX1_RABPU (Q6RZN3    ), GLRX1_RAT   (Q9ESH6    ), GLRX1_RHIID (B7ZFT1    ), 
GLRX1_RICBR (Q1RHJ0    ), GLRX1_RICCN (Q92J02    ), GLRX1_RICFE (Q4UKL7    ), 
GLRX1_RICPR (Q9ZDW1    ), GLRX1_RICTY (Q68XG4    ), GLRX1_SALTI (P0A1P9    ), 
GLRX1_SALTY (P0A1P8    ), GLRX1_SCHPO (O36032    ), GLRX1_SHIFL (P68689    ), 
GLRX1_SYNY3 (P74593    ), GLRX1_VACCA (Q76ZV3    ), GLRX1_VACCC (P68690    ), 
GLRX1_VACCP (P68691    ), GLRX1_VACCT (Q77TL9    ), GLRX1_VACCW (P68692    ), 
GLRX1_VAR67 (P32983    ), GLRX1_YEAST (P25373    ), GLRX2_ECO57 (P0AC61    ), 
GLRX2_ECOL6 (P0AC60    ), GLRX2_ECOLI (P0AC59    ), GLRX2_SCHPO (Q9UTI2    ), 
GLRX2_SYNY3 (P73492    ), GLRX2_YEAST (P17695    ), GLRX3_ECO57 (P0AC64    ), 
GLRX3_ECOL6 (P0AC63    ), GLRX3_ECOLI (P0AC62    ), GLRX_BPT4   (P00276    ), 
GLRX_DICDI  (Q54GP8    ), GLRX_HAEIN  (P45242    ), GLRX_MIMIV  (Q5UQ14    ), 
GLRX_NEIMA  (Q9JVU9    ), GLRX_NEIMB  (Q9JY15    ), GLRX_PSEAE  (Q9HU55    ), 
GLRX_RICCO  (P55143    ), GLRX_SOLLC  (Q9ZR41    ), GLRX_VERFO  (O81187    ), 
GRXC2_ARATH (Q9FNE2    ), GRXC4_ARATH (Q8LFQ6    ), GRXC4_ORYSJ (Q6K953    ), 
GRXC6_ORYSJ (P55142    ), GRXC8_ORYSJ (Q0DAE4    ), GSPRX_MARGR (B3EWI1    ), 
PGES2_BOVIN (Q66LN0    ), PGES2_DANRE (Q7ZUC7    ), PGES2_HUMAN (Q9H7Z7    ), 
PGES2_MACFA (Q9N0A4    ), PGES2_MOUSE (Q8BWM0    ), PRX5_HAEIN  (P44758    ), 
THIO_ARCFU  (O28137    ), THIO_METJA  (Q57755    ), THIO_METTH  (O26898    ), 
THIO_METTM  (P42035    ), YRUB_CLOPA  (P23171    )
» more

UniProtKB/Swiss-Prot
False negative sequences
40 sequences

GLRX2_BOVIN (Q32L67    ), GLRX2_HUMAN (Q9NS18    ), GLRX2_MOUSE (Q923X4    ), 
GLRX2_PONAB (Q5RC53    ), GLRX2_RAT   (Q6AXW1    ), GLRX8_YEAST (Q05926    ), 
GLRX_ENCCU  (Q8SUM8    ), GLRX_VIBCH  (Q9KSW0    ), GRC10_ARATH (Q29PZ1    ), 
GRC10_ORYSJ (Q2R076    ), GRC11_ARATH (Q9LYC6    ), GRC11_ORYSJ (Q2R075    ), 
GRC12_ARATH (O82254    ), GRC12_ORYSJ (Q2R073    ), GRC13_ARATH (O82255    ), 
GRC13_ORYSJ (Q0IRB0    ), GRC14_ARATH (Q9LYC5    ), GRC14_ORYSJ (Q0IMV4    ), 
GRC15_ORYSJ (Q2QP86    ), GRCR1_DROME (Q9VNL4    ), GRCR1_HUMAN (A8MXD5    ), 
GRCR1_MOUSE (Q50H32    ), GRCR2_DROME (Q9W4S1    ), GRXC1_ARATH (Q8L8T2    ), 
GRXC1_ORYSJ (Q7G8Y5    ), GRXC2_ORYSJ (Q0JG89    ), GRXC3_ARATH (Q9FVX1    ), 
GRXC3_ORYSJ (Q6K609    ), GRXC5_ARATH (Q8GWS0    ), GRXC5_ORYSJ (Q0JDM4    ), 
GRXC6_ARATH (Q8L9S3    ), GRXC7_ARATH (Q96305    ), GRXC7_ORYSJ (Q0DK35    ), 
GRXC8_ARATH (Q8LF89    ), GRXC9_ARATH (Q9SGP6    ), GRXC9_ORYSJ (Q7XIZ1    ), 
TRXR1_HUMAN (Q16881    ), TRXR3_HUMAN (Q86VQ6    ), TRXR3_MOUSE (Q99MD6    ), 
YTNI_BACSU  (O34639    )
» more

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

NUON_CAMC1  (A7ZBF3    ), SIP5_PICGU  (A5DQJ8    ), Y3476_BRADU (Q89PK4    )

		
PDB
[Detailed view]
28 PDB

1AAZ; 1DE1; 1DE2; 1EGO; 1EGR; 1FO5; 1FOV; 1G7O; 1JHB; 1KTE; 1NHO; 1NM3; 1Z9H; 2HZE; 2HZF; 2PBJ; 3C1R; 3C1S; 3CTF; 3CTG; 3D4M; 3QMX; 4KX4; 4MJA; 4MJB; 4MJC; 4MJE; 4RQR
» more

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