Entry: PS00207

Forthcoming changes to the profile format
General information about the entry

Entry name [info] TRANSFERRIN_LIKE_3
Accession [info] PS00207
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00182

Name and characterization of the entry

Description [info] Transferrin-like domain signature 3.
Pattern [info]
[DENQK]-[YF]-x-[LY]-L-C-x-[DN]-x(5,8)-[LIV]-x(4,5)-C-x(2)-A-x(4)-[HQR]-x-
[LIVMFYW]-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 58 in 34 different sequences
Number of true positive hits 58 in 34 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 2
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.67 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Site [info] disulfide at position 6
Site [info] disulfide at position 12
Site [info] iron at position 16
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
34 sequences

ICA_MOUSE   (Q9DBD0), ICA_PIG     (Q29545), TRFE1_SALSA (P80426), 
TRFE2_SALSA (P80429), TRFEA_XENLA (P20233), TRFEB_XENLA (Q6PGT3), 
TRFE_ANAPL  (P56410), TRFE_BOVIN  (Q29443), TRFE_CHICK  (P02789), 
TRFE_GADMO  (Q92079), TRFE_HORSE  (P27425), TRFE_HUMAN  (P02787), 
TRFE_MOUSE  (Q921I1), TRFE_ONCKI  (P79815), TRFE_ORYLA  (P79819), 
TRFE_PANTR  (A5A6I6), TRFE_PAROL  (O93429), TRFE_PIG    (P09571), 
TRFE_RABIT  (P19134), TRFE_RAT    (P12346), TRFE_XENTR  (Q501K5), 
TRFL_BOVIN  (P24627), TRFL_BUBBU  (O77698), TRFL_CAMDR  (Q9TUM0), 
TRFL_CAPHI  (Q29477), TRFL_HORSE  (O77811), TRFL_HUMAN  (P02788), 
TRFL_MOUSE  (P08071), TRFL_PIG    (P14632), TRFM_HUMAN  (P08582), 
TRFM_MOUSE  (Q9R0R1), TRFM_RABIT  (O97490), TRF_BLADI   (Q02942), 
TRF_MANSE   (P22297)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

MYP_STRPU   (P19615), TRF_SARPE   (Q26643)

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

TRFE_DRONO  (P85895)

		
PDB
[Detailed view]
155 PDB

1A8E; 1A8F; 1AIV; 1AOV; 1B0L; 1B1X; 1B3E; 1B7U; 1B7Z; 1BIY; 1BKA; 1BLF; 1BP5; 1BTJ; 1CB6; 1CE2; 1D3K; 1D4N; 1DOT; 1DSN; 1DTZ; 1EH3; 1F9B; 1FCK; 1FQE; 1FQF; 1H43; 1H44; 1H45; 1H76; 1I6B; 1I6Q; 1IEJ; 1IQ7; 1JNF; 1JQF; 1JW1; 1L5T; 1LCF; 1LCT; 1LFG; 1LFH; 1LFI; 1N04; 1N76; 1N7W; 1N7X; 1N84; 1NFT; 1NKX; 1NNT; 1OQG; 1OQH; 1OVT; 1QJM; 1RYO; 1RYX; 1SDX; 1SQY; 1SUV; 1TFA; 1TFD; 1VFD; 1VFE; 2ALU; 2AYS; 2B65; 2BJJ; 2D3I; 2DOJ; 2DP8; 2DQV; 2DS9; 2DSF; 2DVC; 2DWA; 2DWH; 2DWI; 2DWJ; 2DXR; 2DXY; 2DYX; 2E0S; 2E1S; 2FA7; 2G93; 2H4I; 2HAU; 2HAV; 2HCA; 2NUV; 2NWJ; 2O1L; 2O51; 2O7U; 2O84; 2OCU; 2P1S; 2PMS; 2PX1; 2Q8J; 2QJE; 2R71; 2R9J; 2ZMB; 3CFL; 3CI8; 3CR9; 3CRB; 3E9X; 3FGS; 3IAZ; 3IB0; 3IB1; 3IB2; 3K0V; 3KJ7; 3MC2; 3MJN; 3O97; 3QYT; 3RGY; 3S9L; 3S9M; 3S9N; 3SDF; 3SKP; 3TAJ; 3TOD; 3TTR; 3TUS; 3U72; 3U8Q; 3UGW; 3UK4; 3USD; 3V5A; 3V83; 3V89; 3V8X; 3VDF; 3VE1; 4DIG; 4DXU; 4FIM; 4FJP; 4FOR; 4G2Z; 4G77; 4G8H; 4GRK; 4H0W; 4N6P; 4NED; 4OQO
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission