Entry: PS00208

General information about the entry

Entry name [info] PLANT_GLOBIN
Accession [info] PS00208
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-DEC-2001 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00183

Name and characterization of the entry

Description [info] Plant hemoglobins signature.
Pattern [info] 
[SN]-P-x-[LV]-x(2)-H-A-x(3)-F.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 57 in 57 different sequences
Number of true positive hits 47 in 47 different sequences
Number of 'unknown' hits 0
Number of false positive hits 10 in 10 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 82.46 %
Recall (true positives / (true positives + false negatives)) 97.92 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] heme_iron at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 47 sequences 

HBL0_PHYPA  (Q9M630    ), HBL1_ARATH  (O24520    ), HBL1_ORYSJ  (O04986    ), 

HBL2_ARATH  (O24521    ), HBL2_BRANA  (Q941Q2    ), HBL2_GOSHI  (Q93Y92    ), 
HBL2_ORYSJ  (O04985    ), HBL2_SOLLC  (Q941P9    ), HBL3_ORYSJ  (Q94FT8    ), 
HBL4_ORYSJ  (Q94FT7    ), HBL_HORVU   (Q42831    ), HBL_MAIZE   (Q9FY42    ), 
HBL_TRETO   (P07803    ), HBL_ZEAMP   (Q9M593    ), HBP1_CASGL  (P08054    ), 
HBP2_CASGL  (P23244    ), HBPA_CASGL  (Q42665    ), HBPL_PARAD  (P68168    ), 
HBPL_PARRI  (P68169    ), LGB1_LUPLU  (P02239    ), LGB1_MEDSA  (P09187    ), 
LGB1_MEDTR  (P27992    ), LGB1_PEA    (P02233    ), LGB1_SOYBN  (P02235    ), 
LGB1_VICFA  (P02232    ), LGB1_VIGUN  (Q43236    ), LGB2_LUPLU  (P02240    ), 
LGB2_MEDTR  (P27993    ), LGB2_PEA    (O48668    ), LGB2_PHAVU  (O04939    ), 
LGB2_SESRO  (P14848    ), LGB2_SOYBN  (P02236    ), LGB2_VIGUN  (Q43296    ), 
LGB3_MEDSA  (P14962    ), LGB3_PEA    (O80405    ), LGB3_SESRO  (P10816    ), 
LGB3_SOYBN  (P02237    ), LGB3_VICFA  (P93849    ), LGB4_MEDSA  (P28010    ), 
LGB4_PEA    (Q9SAZ1    ), LGB5_PEA    (O48665    ), LGB6_PEA    (Q9SAZ0    ), 
LGBA_PHAVU  (P02234    ), LGBA_SOYBN  (P02238    ), LGB_CANLI   (P42511    ), 
LGB_LOTJA   (Q9FEP8    ), LGB_PSOTE   (P27199    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

LGB2_VICFA  (P93848    )


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			1 sequence
			


			
HBL_PSEMZ   (P85943    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			10 sequences
			


			
BCP1_DEBHA  (Q6BII5    ), F91A1_DANRE (Q6TEP1    ), F91A1_HUMAN (Q658Y4    ), 

			
F91A1_MOUSE (Q3UVG3    ), ISPG_CHLAB  (Q5L669    ), POL_HTL32   (Q0R5R2    ), 
POL_HTL3P   (Q4U0X6    ), PPK3_SCHPO  (O13733    ), RPN1_ENCCU  (Q8SS65    ), 
SEC2_YEAST  (P17065    )


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			27 PDB
			


			1BIN; 1D8U; 1FSL; 1GDI; 1GDJ; 1GDK; 1GDL; 1LH1; 1LH2; 1LH3; 1LH5; 1LH6; 
			
				1LH7; 2GDM; 2GNV; 2GNW; 2LH1; 2LH2; 2LH3; 2LH5; 2LH6; 2LH7; 2OIF; 2R50; 
				3QQQ; 3QQR; 3ZHW
			
			

			» more

				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission