Entry: PS00232

General information about the entry

Entry name [info] CADHERIN_1
Accession [info] PS00232
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00205

Name and characterization of the entry

Description [info] Cadherin domain signature.
Pattern [info]
[LIV]-x-[LIV]-x-D-x-N-D-[NH]-x-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 1'485 in 305 different sequences
Number of true positive hits 1'485 in 305 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 15
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 23
Site [info] calcium(?) at position 5
Site [info] calcium(?) at position 7
Site [info] calcium(?) at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
305 sequences

CAD10_CHICK (P79995    ), CAD10_HUMAN (Q9Y6N8    ), CAD10_MOUSE (P70408    ), 
CAD11_CHICK (O93319    ), CAD11_HUMAN (P55287    ), CAD11_MOUSE (P55288    ), 
CAD12_HUMAN (P55289    ), CAD12_MOUSE (Q5RJH3    ), CAD13_BOVIN (Q3B7N0    ), 
CAD13_CHICK (P33150    ), CAD13_HUMAN (P55290    ), CAD13_MOUSE (Q9WTR5    ), 
CAD13_PONAB (Q5R5W6    ), CAD15_HUMAN (P55291    ), CAD15_MOUSE (P33146    ), 
CAD16_HUMAN (O75309    ), CAD16_MOUSE (O88338    ), CAD16_RABIT (Q28634    ), 
CAD17_HUMAN (Q12864    ), CAD17_MOUSE (Q9R100    ), CAD17_RAT   (P55281    ), 
CAD18_BOVIN (Q08DJ5    ), CAD18_HUMAN (Q13634    ), CAD19_HUMAN (Q9H159    ), 
CAD20_CHICK (Q8QGH3    ), CAD20_HUMAN (Q9HBT6    ), CAD20_MOUSE (Q9Z0M3    ), 
CAD20_RAT   (Q5DWV1    ), CAD20_XENLA (Q91838    ), CAD22_HUMAN (Q9UJ99    ), 
CAD22_MOUSE (Q9WTP5    ), CAD22_RAT   (Q63315    ), CAD23_HUMAN (Q9H251    ), 
CAD23_MOUSE (Q99PF4    ), CAD23_RAT   (P58365    ), CAD24_HUMAN (Q86UP0    ), 
CAD24_MOUSE (Q6PFX6    ), CAD26_HUMAN (Q8IXH8    ), CAD26_MOUSE (P59862    ), 
CAD2A_XENLA (P33147    ), CAD2B_XENLA (P20310    ), CAD86_DROME (Q9VGW1    ), 
CAD87_DROME (Q9VGG5    ), CAD89_DROME (Q9VEU1    ), CADE_DROME  (Q24298    ), 
CADH1_BOVIN (Q6R8F2    ), CADH1_CANLF (F1PAA9    ), CADH1_CHICK (P08641    ), 
CADH1_HUMAN (P12830    ), CADH1_MOUSE (P09803    ), CADH1_PONAB (Q5RAX1    ), 
CADH1_RAT   (Q9R0T4    ), CADH1_XENLA (P30944    ), CADH2_BOVIN (P19534    ), 
CADH2_CALJA (B0KW95    ), CADH2_CHICK (P10288    ), CADH2_CRIGR (O55075    ), 
CADH2_DANRE (Q90275    ), CADH2_HUMAN (P19022    ), CADH2_MOUSE (P15116    ), 
CADH2_OTOGA (B4USZ0    ), CADH2_PONAB (Q5R9X1    ), CADH2_RAT   (Q9Z1Y3    ), 
CADH2_RHIFE (B2KI42    ), CADH3_BOVIN (P19535    ), CADH3_CAEEL (P34616    ), 
CADH3_HUMAN (P22223    ), CADH3_MOUSE (P10287    ), CADH3_PIG   (O18926    ), 
CADH4_CAEEL (Q19319    ), CADH4_CHICK (P24503    ), CADH4_HUMAN (P55283    ), 
CADH4_MOUSE (P39038    ), CADH4_RAT   (Q63149    ), CADH4_XENLA (P79883    ), 
CADH5_BOVIN (Q6URK6    ), CADH5_CHICK (Q8AYD0    ), CADH5_HUMAN (P33151    ), 
CADH5_MOUSE (P55284    ), CADH5_PIG   (O02840    ), CADH6_BOVIN (Q3SWX5    ), 
CADH6_CHICK (Q90762    ), CADH6_HUMAN (P55285    ), CADH6_MOUSE (P97326    ), 
CADH6_RAT   (P55280    ), CADH7_CHICK (Q90763    ), CADH7_HUMAN (Q9ULB5    ), 
CADH7_MOUSE (Q8BM92    ), CADH7_RAT   (Q5DWV2    ), CADH8_HUMAN (P55286    ), 
CADH8_MOUSE (P97291    ), CADH8_RAT   (O54800    ), CADH9_HUMAN (Q9ULB4    ), 
CADH9_MOUSE (P70407    ), CADHB_XENLA (P33152    ), CADHF_XENLA (P33148    ), 
CADHK_CHICK (P33145    ), CADN2_DROME (Q9VJB6    ), CADN_DROME  (O15943    ), 
CDHR1_BOVIN (Q8WN91    ), CDHR1_CHICK (Q8UVJ7    ), CDHR1_DANRE (Q6B3P0    ), 
CDHR1_HUMAN (Q96JP9    ), CDHR1_MOUSE (Q8VHP6    ), CDHR1_RAT   (Q91XU7    ), 
CDHR1_XENLA (Q6B457    ), CDHR2_HUMAN (Q9BYE9    ), CDHR2_MOUSE (E9Q7P9    ), 
CDHR4_HUMAN (A6H8M9    ), CDHR5_HUMAN (Q9HBB8    ), CDHR5_MOUSE (Q8VHF2    ), 
CDHR5_RAT   (Q9JIK1    ), CELR1_HUMAN (Q9NYQ6    ), CELR1_MOUSE (O35161    ), 
CELR2_HUMAN (Q9HCU4    ), CELR2_MOUSE (Q9R0M0    ), CELR2_RAT   (Q9QYP2    ), 
CELR3_HUMAN (Q9NYQ7    ), CELR3_MOUSE (Q91ZI0    ), CELR3_RAT   (O88278    ), 
DSC1_BOVIN  (Q01107    ), DSC1_HUMAN  (Q08554    ), DSC1_MOUSE  (P55849    ), 
DSC2_BOVIN  (P33545    ), DSC2_HUMAN  (Q02487    ), DSC2_MOUSE  (P55292    ), 
DSC3_BOVIN  (Q28060    ), DSC3_HUMAN  (Q14574    ), DSC3_MOUSE  (P55850    ), 
DSG1A_MOUSE (Q61495    ), DSG1B_MOUSE (Q7TSF1    ), DSG1C_MOUSE (Q7TSF0    ), 
DSG1_BOVIN  (Q03763    ), DSG1_CANLF  (Q9GKQ8    ), DSG1_HUMAN  (Q02413    ), 
DSG1_PIG    (Q3BDI7    ), DSG2_HUMAN  (Q14126    ), DSG2_MOUSE  (O55111    ), 
DSG3_CANLF  (Q7YRU7    ), DSG3_HUMAN  (P32926    ), DSG3_MOUSE  (O35902    ), 
DSG4_HUMAN  (Q86SJ6    ), DSG4_MOUSE  (Q7TMD7    ), DSG4_RAT    (Q6W3B0    ), 
DS_DROME    (Q24292    ), FAT1_HUMAN  (Q14517    ), FAT2_DROME  (Q9VW71    ), 
FAT2_HUMAN  (Q9NYQ8    ), FAT2_MOUSE  (Q5F226    ), FAT2_RAT    (O88277    ), 
FAT3_HUMAN  (Q8TDW7    ), FAT3_MOUSE  (Q8BNA6    ), FAT3_RAT    (Q8R508    ), 
FAT4_HUMAN  (Q6V0I7    ), FAT4_MOUSE  (Q2PZL6    ), FAT_DROME   (P33450    ), 
HMR1_CAEEL  (Q967F4    ), PC11X_GORGO (Q6X862    ), PC11X_HUMAN (Q9BZA7    ), 
PC11X_PANPA (Q6WYY1    ), PC11X_PANTR (Q71M42    ), PC11X_PIG   (Q6KEQ9    ), 
PC11X_PONPY (Q6WXV7    ), PC11Y_HUMAN (Q9BZA8    ), PCD10_HUMAN (Q9P2E7    ), 
PCD12_HUMAN (Q9NPG4    ), PCD12_MOUSE (O55134    ), PCD15_CHICK (Q0ZM14    ), 
PCD15_HUMAN (Q96QU1    ), PCD15_MOUSE (Q99PJ1    ), PCD16_HUMAN (Q96JQ0    ), 
PCD16_MOUSE (E9PVD3    ), PCD16_RAT   (D4ACX8    ), PCD17_HUMAN (O14917    ), 
PCD18_BOVIN (A7MB46    ), PCD18_HUMAN (Q9HCL0    ), PCD18_MOUSE (Q8VHR0    ), 
PCD19_HUMAN (Q8TAB3    ), PCD19_MOUSE (Q80TF3    ), PCD20_HUMAN (Q8N6Y1    ), 
PCD20_MOUSE (Q8BIZ0    ), PCD23_HUMAN (Q6V1P9    ), PCDA1_HUMAN (Q9Y5I3    ), 
PCDA1_PANTR (Q5DRF5    ), PCDA2_HUMAN (Q9Y5H9    ), PCDA2_PANTR (Q5DRF0    ), 
PCDA3_HUMAN (Q9Y5H8    ), PCDA3_PANTR (Q5DRE9    ), PCDA4_HUMAN (Q9UN74    ), 
PCDA4_MOUSE (O88689    ), PCDA4_PANTR (Q5DRE8    ), PCDA4_RAT   (Q767I8    ), 
PCDA5_HUMAN (Q9Y5H7    ), PCDA5_PANTR (Q5DRE7    ), PCDA6_HUMAN (Q9UN73    ), 
PCDA6_PANTR (Q5DRE6    ), PCDA7_HUMAN (Q9UN72    ), PCDA7_PANTR (Q5DRE5    ), 
PCDA8_HUMAN (Q9Y5H6    ), PCDA8_PANTR (Q5DRE4    ), PCDA9_HUMAN (Q9Y5H5    ), 
PCDA9_MOUSE (Q91Y11    ), PCDA9_PANTR (Q5DRE3    ), PCDAA_HUMAN (Q9Y5I2    ), 
PCDAA_MOUSE (Q91Y20    ), PCDAA_PANTR (Q5DRF4    ), PCDAB_HUMAN (Q9Y5I1    ), 
PCDAB_PANTR (Q5DRF3    ), PCDAC_HUMAN (Q9UN75    ), PCDAC_PANTR (Q5DRF2    ), 
PCDAD_HUMAN (Q9Y5I0    ), PCDAD_PANTR (Q5DRF1    ), PCDB1_HUMAN (Q9Y5F3    ), 
PCDB1_PANTR (Q5DRE0    ), PCDB2_HUMAN (Q9Y5E7    ), PCDB2_PANTR (Q5DRD2    ), 
PCDB3_HUMAN (Q9Y5E6    ), PCDB3_PANTR (Q5DRD1    ), PCDB4_HUMAN (Q9Y5E5    ), 
PCDB4_PANTR (Q5DRD0    ), PCDB5_HUMAN (Q9Y5E4    ), PCDB5_PANTR (Q5DRC9    ), 
PCDB6_HUMAN (Q9Y5E3    ), PCDB6_PANTR (Q5DRC8    ), PCDB7_HUMAN (Q9Y5E2    ), 
PCDB7_PANTR (Q5DRC7    ), PCDB8_HUMAN (Q9UN66    ), PCDB8_PANTR (Q5DRC6    ), 
PCDB9_HUMAN (Q9Y5E1    ), PCDB9_PANTR (Q5DRC4    ), PCDBA_HUMAN (Q9UN67    ), 
PCDBA_PANTR (Q5DRD9    ), PCDBB_HUMAN (Q9Y5F2    ), PCDBB_PANTR (Q5DRD8    ), 
PCDBC_HUMAN (Q9Y5F1    ), PCDBC_PANTR (Q5DRD7    ), PCDBD_HUMAN (Q9Y5F0    ), 
PCDBD_PANTR (Q5DRD6    ), PCDBE_HUMAN (Q9Y5E9    ), PCDBE_MOUSE (Q6PB90    ), 
PCDBE_PANTR (Q5DRD5    ), PCDBF_HUMAN (Q9Y5E8    ), PCDBF_PANTR (Q5DRD3    ), 
PCDBG_HUMAN (Q9NRJ7    ), PCDBH_PANTR (Q5DRC3    ), PCDBI_HUMAN (Q96TA0    ), 
PCDBI_MOUSE (Q91Y02    ), PCDBI_PANTR (Q5DRD4    ), PCDC1_HUMAN (Q9H158    ), 
PCDC1_PANTR (Q5DRE2    ), PCDC2_HUMAN (Q9Y5I4    ), PCDC2_PANTR (Q5DRE1    ), 
PCDG1_HUMAN (Q9Y5H4    ), PCDG1_PANTR (Q5DRC2    ), PCDG2_HUMAN (Q9Y5H1    ), 
PCDG2_PANTR (Q5DRB8    ), PCDG3_HUMAN (Q9Y5H0    ), PCDG3_PANTR (Q5DRB7    ), 
PCDG4_HUMAN (Q9Y5G9    ), PCDG4_MOUSE (Q91XY4    ), PCDG4_PANTR (Q5DRB6    ), 
PCDG5_HUMAN (Q9Y5G8    ), PCDG5_PANTR (Q5DRB5    ), PCDG6_HUMAN (Q9Y5G7    ), 
PCDG6_PANTR (Q5DRB4    ), PCDG7_HUMAN (Q9Y5G6    ), PCDG7_PANTR (Q5DRB3    ), 
PCDG8_HUMAN (Q9Y5G5    ), PCDG8_PANTR (Q5DRB2    ), PCDG9_HUMAN (Q9Y5G4    ), 
PCDG9_PANTR (Q5DRB1    ), PCDGA_HUMAN (Q9Y5H3    ), PCDGA_PANTR (Q5DRC1    ), 
PCDGB_HUMAN (Q9Y5H2    ), PCDGB_PANTR (Q5DRC0    ), PCDGC_HUMAN (O60330    ), 
PCDGC_PANTR (Q5DRB9    ), PCDGD_HUMAN (Q9Y5G3    ), PCDGD_PANTR (Q5DRB0    ), 
PCDGE_HUMAN (Q9Y5G2    ), PCDGE_PANTR (Q5DRA9    ), PCDGF_HUMAN (Q9Y5G1    ), 
PCDGG_HUMAN (Q9UN71    ), PCDGG_PANTR (Q5DRA8    ), PCDGH_HUMAN (Q9Y5G0    ), 
PCDGH_PANTR (Q5DRA7    ), PCDGI_HUMAN (Q9Y5F9    ), PCDGI_PANTR (Q5DRA6    ), 
PCDGJ_HUMAN (Q9Y5F8    ), PCDGJ_PANTR (Q5DRA5    ), PCDGK_HUMAN (Q9UN70    ), 
PCDGK_PANTR (Q5DRA4    ), PCDGL_HUMAN (Q9Y5F7    ), PCDGL_PANTR (Q5DRA3    ), 
PCDGM_HUMAN (Q9Y5F6    ), PCDGM_PANTR (Q5DRA2    ), PCDH1_HUMAN (Q08174    ), 
PCDH3_RAT   (Q63418    ), PCDH7_HUMAN (O60245    ), PCDH8_HUMAN (O95206    ), 
PCDH8_MOUSE (Q7TSK3    ), PCDH8_RAT   (D3ZE55    ), PCDH9_HUMAN (Q9HC56    ), 
PCDL_ACRMI  (B8V7Q1    ), STAN_DROME  (Q9V5N8    )
» more

UniProtKB/Swiss-Prot
False negative sequences
15 sequences

CAD96_DROME (Q9VBW3    ), CDHR3_HUMAN (Q6ZTQ4    ), CDHR3_MOUSE (Q8BL00    ), 
CSTN1_DROME (Q9V498    ), CSTN1_HUMAN (O94985    ), CSTN1_MOUSE (Q9EPL2    ), 
CSTN2_HUMAN (Q9H4D0    ), CSTN2_MOUSE (Q9ER65    ), CSTN2_RAT   (Q8VDA1    ), 
CSTN3_BOVIN (Q0VCN6    ), CSTN3_HUMAN (Q9BQT9    ), CSTN3_MOUSE (Q99JH7    ), 
CSTN3_PONAB (Q5R9Q9    ), CSTN3_RAT   (Q8R553    ), HMU_HALWD   (Q18DN4    )
» more

PDB
[Detailed view]
43 PDB

1EDH; 1FF5; 1L3W; 1NCJ; 1Q1P; 1WYJ; 2A4E; 2A62; 2O72; 2QVF; 2QVI; 2V37; 2WCP; 2WHV; 2YQG; 2YST; 3K5R; 3K5S; 3LND; 3LNE; 3LNF; 3LNG; 3LNH; 3LNI; 3MVS; 3PPE; 3Q2L; 3Q2N; 3Q2V; 3Q2W; 3QRB; 3UBH; 4APX; 4AQ8; 4AQA; 4AQE; 4AXW; 4NQQ; 4NUM; 4NUP; 4NUQ; 4OY9; 4QD2
» more

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