PROSITE entry PS00232
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General information about the entry
| Entry name [info] | CADHERIN_1 |
| Accession [info] | PS00232 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00205 |
Name and characterization of the entry
| Description [info] | Cadherin domain signature. |
| Pattern [info] |
[LIV]-x-[LIV]-x-D-x-N-D-[NH]-x-P. |
Numerical results [info]
| Total number of hits | 1'529 in 316 different sequences |
| Number of true positive hits | 1'529 in 316 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 20 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 98.71 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes |
| Maximum number of repetitions [info] | 23 |
| Site [info] | calcium(?) at position 5 |
| Site [info] | calcium(?) at position 7 |
| Site [info] | calcium(?) at position 8 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
316 sequences
CAD10_CHICK (P79995), CAD10_HUMAN (Q9Y6N8), CAD10_MOUSE (P70408), CAD11_CHICK (O93319), CAD11_HUMAN (P55287), CAD11_MOUSE (P55288), CAD12_HUMAN (P55289), CAD12_MOUSE (Q5RJH3), CAD13_BOVIN (Q3B7N0), CAD13_CHICK (P33150), CAD13_HUMAN (P55290), CAD13_MOUSE (Q9WTR5), CAD13_PONAB (Q5R5W6), CAD15_HUMAN (P55291), CAD15_MOUSE (P33146), CAD16_HUMAN (O75309), CAD16_MOUSE (O88338), CAD16_RABIT (Q28634), CAD17_HUMAN (Q12864), CAD17_MOUSE (Q9R100), CAD17_RAT (P55281), CAD18_BOVIN (Q08DJ5), CAD18_HUMAN (Q13634), CAD19_HUMAN (Q9H159), CAD20_CHICK (Q8QGH3), CAD20_HUMAN (Q9HBT6), CAD20_MOUSE (Q9Z0M3), CAD20_RAT (Q5DWV1), CAD20_XENLA (Q91838), CAD22_HUMAN (Q9UJ99), CAD22_MOUSE (Q9WTP5), CAD22_RAT (Q63315), CAD23_HUMAN (Q9H251), CAD23_MOUSE (Q99PF4), CAD23_RAT (P58365), CAD24_HUMAN (Q86UP0), CAD24_MOUSE (Q6PFX6), CAD26_HUMAN (Q8IXH8), CAD26_MOUSE (P59862), CAD2A_XENLA (P33147), CAD2B_XENLA (P20310), CAD86_DROME (Q9VGW1), CAD87_DROME (Q9VGG5), CAD89_DROME (Q9VEU1), CAD99_DROME (Q9VAF5), CADE_DROME (Q24298), CADH1_ANOGA (A0A1S4GGP7), CADH1_BOVIN (Q6R8F2), CADH1_CANLF (F1PAA9), CADH1_CHICK (P08641), CADH1_DANRE (Q90Z37), CADH1_HUMAN (P12830), CADH1_MOUSE (P09803), CADH1_PONAB (Q5RAX1), CADH1_RAT (Q9R0T4), CADH1_XENLA (P30944), CADH2_BOVIN (P19534), CADH2_CALJA (B0KW95), CADH2_CHICK (P10288), CADH2_CRIGR (O55075), CADH2_DANRE (Q90275), CADH2_HUMAN (P19022), CADH2_MOUSE (P15116), CADH2_OTOGA (B4USZ0), CADH2_PONAB (Q5R9X1), CADH2_RAT (Q9Z1Y3), CADH2_RHIFE (B2KI42), CADH3_BOVIN (P19535), CADH3_CAEEL (P34616), CADH3_HUMAN (P22223), CADH3_MOUSE (P10287), CADH3_PIG (O18926), CADH4_CAEEL (Q19319), CADH4_CHICK (P24503), CADH4_HUMAN (P55283), CADH4_MOUSE (P39038), CADH4_RAT (Q63149), CADH4_XENLA (P79883), CADH5_BOVIN (Q6URK6), CADH5_CHICK (Q8AYD0), CADH5_DANRE (Q68SP4), CADH5_HUMAN (P33151), CADH5_MOUSE (P55284), CADH5_PIG (O02840), CADH6_BOVIN (Q3SWX5), CADH6_CHICK (Q90762), CADH6_HUMAN (P55285), CADH6_MOUSE (P97326), CADH6_RAT (P55280), CADH7_CHICK (Q90763), CADH7_HUMAN (Q9ULB5), CADH7_MOUSE (Q8BM92), CADH7_RAT (Q5DWV2), CADH8_HUMAN (P55286), CADH8_MOUSE (P97291), CADH8_RAT (O54800), CADH9_HUMAN (Q9ULB4), CADH9_MOUSE (P70407), CADHB_XENLA (P33152), CADHF_XENLA (P33148), CADHK_CHICK (P33145), CADN2_DROME (Q9VJB6), CADN_DROME (O15943), CDHR1_BOVIN (Q8WN91), CDHR1_CHICK (Q8UVJ7), CDHR1_DANRE (Q6B3P0), CDHR1_HUMAN (Q96JP9), CDHR1_MOUSE (Q8VHP6), CDHR1_RAT (Q91XU7), CDHR1_XENLA (Q6B457), CDHR2_HUMAN (Q9BYE9), CDHR2_MOUSE (E9Q7P9), CDHR4_HUMAN (A6H8M9), CDHR5_HUMAN (Q9HBB8), CDHR5_MOUSE (Q8VHF2), CDHR5_RAT (Q9JIK1), CELR1_HUMAN (Q9NYQ6), CELR1_MOUSE (O35161), CELR2_HUMAN (Q9HCU4), CELR2_MOUSE (Q9R0M0), CELR2_RAT (Q9QYP2), CELR3_HUMAN (Q9NYQ7), CELR3_MOUSE (Q91ZI0), CELR3_RAT (O88278), CELR_CAEEL (G5EDK5), DSC1_BOVIN (Q01107), DSC1_HUMAN (Q08554), DSC1_MOUSE (P55849), DSC2L_DANRE (F1QSQ0), DSC2_BOVIN (P33545), DSC2_HUMAN (Q02487), DSC2_MOUSE (P55292), DSC3_BOVIN (Q28060), DSC3_HUMAN (Q14574), DSC3_MOUSE (P55850), DSG1A_MOUSE (Q61495), DSG1B_MOUSE (Q7TSF1), DSG1C_MOUSE (Q7TSF0), DSG1_BOVIN (Q03763), DSG1_CANLF (Q9GKQ8), DSG1_HUMAN (Q02413), DSG1_PIG(Q3BDI7), DSG21_DANRE (H2EQR6), DSG2L_DANRE (A0A8M2BIB6), DSG2_HUMAN (Q14126), DSG2_MOUSE (O55111), DSG3_CANLF (Q7YRU7), DSG3_HUMAN (P32926), DSG3_MOUSE (O35902), DSG4_HUMAN (Q86SJ6), DSG4_MOUSE (Q7TMD7), DSG4_RAT(Q6W3B0), DS_DROME(Q24292), FAT1_HUMAN (Q14517), FAT2_DROME (Q9VW71), FAT2_HUMAN (Q9NYQ8), FAT2_MOUSE (Q5F226), FAT2_RAT(O88277), FAT3_HUMAN (Q8TDW7), FAT3_MOUSE (Q8BNA6), FAT3_RAT(Q8R508), FAT4_HUMAN (Q6V0I7), FAT4_MOUSE (Q2PZL6), FAT_DROME (P33450), HMR1_CAEEL (Q967F4), PC11X_GORGO (Q6X862), PC11X_HUMAN (Q9BZA7), PC11X_PANPA (Q6WYY1), PC11X_PANTR (Q71M42), PC11X_PIG (Q6KEQ9), PC11X_PONPY (Q6WXV7), PC11Y_HUMAN (Q9BZA8), PCD10_HUMAN (Q9P2E7), PCD12_HUMAN (Q9NPG4), PCD12_MOUSE (O55134), PCD15_CHICK (Q0ZM14), PCD15_HUMAN (Q96QU1), PCD15_MOUSE (Q99PJ1), PCD16_HUMAN (Q96JQ0), PCD16_MOUSE (E9PVD3), PCD16_RAT (D4ACX8), PCD17_HUMAN (O14917), PCD18_BOVIN (A7MB46), PCD18_HUMAN (Q9HCL0), PCD18_MOUSE (Q8VHR0), PCD19_HUMAN (Q8TAB3), PCD19_MOUSE (Q80TF3), PCD20_HUMAN (Q8N6Y1), PCD20_MOUSE (Q8BIZ0), PCD23_HUMAN (Q6V1P9), PCDA1_HUMAN (Q9Y5I3), PCDA1_PANTR (Q5DRF5), PCDA2_HUMAN (Q9Y5H9), PCDA2_PANTR (Q5DRF0), PCDA3_HUMAN (Q9Y5H8), PCDA3_PANTR (Q5DRE9), PCDA4_HUMAN (Q9UN74), PCDA4_MOUSE (O88689), PCDA4_PANTR (Q5DRE8), PCDA4_RAT (Q767I8), PCDA5_HUMAN (Q9Y5H7), PCDA5_PANTR (Q5DRE7), PCDA6_HUMAN (Q9UN73), PCDA6_PANTR (Q5DRE6), PCDA7_HUMAN (Q9UN72), PCDA7_MOUSE (Q91Y13), PCDA7_PANTR (Q5DRE5), PCDA8_HUMAN (Q9Y5H6), PCDA8_PANTR (Q5DRE4), PCDA9_HUMAN (Q9Y5H5), PCDA9_MOUSE (Q91Y11), PCDA9_PANTR (Q5DRE3), PCDAA_HUMAN (Q9Y5I2), PCDAA_MOUSE (Q91Y20), PCDAA_PANTR (Q5DRF4), PCDAB_HUMAN (Q9Y5I1), PCDAB_PANTR (Q5DRF3), PCDAC_HUMAN (Q9UN75), PCDAC_PANTR (Q5DRF2), PCDAD_HUMAN (Q9Y5I0), PCDAD_PANTR (Q5DRF1), PCDB1_HUMAN (Q9Y5F3), PCDB1_PANTR (Q5DRE0), PCDB2_HUMAN (Q9Y5E7), PCDB2_PANTR (Q5DRD2), PCDB3_HUMAN (Q9Y5E6), PCDB3_PANTR (Q5DRD1), PCDB4_HUMAN (Q9Y5E5), PCDB4_PANTR (Q5DRD0), PCDB5_HUMAN (Q9Y5E4), PCDB5_PANTR (Q5DRC9), PCDB6_HUMAN (Q9Y5E3), PCDB6_MOUSE (Q91XZ4), PCDB6_PANTR (Q5DRC8), PCDB7_HUMAN (Q9Y5E2), PCDB7_PANTR (Q5DRC7), PCDB8_HUMAN (Q9UN66), PCDB8_MOUSE (Q91XZ2), PCDB8_PANTR (Q5DRC6), PCDB9_HUMAN (Q9Y5E1), PCDB9_PANTR (Q5DRC4), PCDBA_HUMAN (Q9UN67), PCDBA_PANTR (Q5DRD9), PCDBB_HUMAN (Q9Y5F2), PCDBB_PANTR (Q5DRD8), PCDBC_HUMAN (Q9Y5F1), PCDBC_PANTR (Q5DRD7), PCDBD_HUMAN (Q9Y5F0), PCDBD_PANTR (Q5DRD6), PCDBE_HUMAN (Q9Y5E9), PCDBE_MOUSE (Q6PB90), PCDBE_PANTR (Q5DRD5), PCDBF_HUMAN (Q9Y5E8), PCDBF_PANTR (Q5DRD3), PCDBG_HUMAN (Q9NRJ7), PCDBH_PANTR (Q5DRC3), PCDBI_HUMAN (Q96TA0), PCDBI_MOUSE (Q91Y02), PCDBI_PANTR (Q5DRD4), PCDC1_HUMAN (Q9H158), PCDC1_PANTR (Q5DRE2), PCDC2_HUMAN (Q9Y5I4), PCDC2_PANTR (Q5DRE1), PCDG1_HUMAN (Q9Y5H4), PCDG1_PANTR (Q5DRC2), PCDG2_HUMAN (Q9Y5H1), PCDG2_PANTR (Q5DRB8), PCDG3_HUMAN (Q9Y5H0), PCDG3_PANTR (Q5DRB7), PCDG4_HUMAN (Q9Y5G9), PCDG4_MOUSE (Q91XY4), PCDG4_PANTR (Q5DRB6), PCDG5_HUMAN (Q9Y5G8), PCDG5_PANTR (Q5DRB5), PCDG6_HUMAN (Q9Y5G7), PCDG6_PANTR (Q5DRB4), PCDG7_HUMAN (Q9Y5G6), PCDG7_PANTR (Q5DRB3), PCDG8_HUMAN (Q9Y5G5), PCDG8_PANTR (Q5DRB2), PCDG9_HUMAN (Q9Y5G4), PCDG9_PANTR (Q5DRB1), PCDGA_HUMAN (Q9Y5H3), PCDGA_PANTR (Q5DRC1), PCDGB_HUMAN (Q9Y5H2), PCDGB_PANTR (Q5DRC0), PCDGC_HUMAN (O60330), PCDGC_PANTR (Q5DRB9), PCDGD_HUMAN (Q9Y5G3), PCDGD_PANTR (Q5DRB0), PCDGE_HUMAN (Q9Y5G2), PCDGE_PANTR (Q5DRA9), PCDGF_HUMAN (Q9Y5G1), PCDGG_HUMAN (Q9UN71), PCDGG_PANTR (Q5DRA8), PCDGH_HUMAN (Q9Y5G0), PCDGH_PANTR (Q5DRA7), PCDGI_HUMAN (Q9Y5F9), PCDGI_PANTR (Q5DRA6), PCDGJ_HUMAN (Q9Y5F8), PCDGJ_PANTR (Q5DRA5), PCDGK_HUMAN (Q9UN70), PCDGK_PANTR (Q5DRA4), PCDGL_HUMAN (Q9Y5F7), PCDGL_PANTR (Q5DRA3), PCDGM_HUMAN (Q9Y5F6), PCDGM_PANTR (Q5DRA2), PCDH1_HUMAN (Q08174), PCDH3_RAT (Q63418), PCDH7_HUMAN (O60245), PCDH8_HUMAN (O95206), PCDH8_MOUSE (Q7TSK3), PCDH8_RAT (D3ZE55), PCDH9_HUMAN (Q9HC56), PCDL_ACRMI (B8V7Q1), STAN_DROME (Q9V5N8)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
20 sequences
CAD96_DROME (Q9VBW3), CASY1_CAEEL (G5ED46), CDHR3_HUMAN (Q6ZTQ4), CDHR3_MOUSE (Q8BL00), CSTN1_DANRE (F1R520), CSTN1_DROME (Q9V498), CSTN1_HUMAN (O94985), CSTN1_MOUSE (Q9EPL2), CSTN1_RAT (Q6Q0N0), CSTN2_DANRE (B0S5G3), CSTN2_HUMAN (Q9H4D0), CSTN2_MOUSE (Q9ER65), CSTN2_RAT (Q8VDA1), CSTN3_BOVIN (Q0VCN6), CSTN3_DANRE (A0A8M9PFP2), CSTN3_HUMAN (Q9BQT9), CSTN3_MOUSE (Q99JH7), CSTN3_PONAB (Q5R9Q9), CSTN3_RAT (Q8R553), HMU_HALWD (Q18DN4)» more |
| PDB [Detailed view] |
146 PDB
1EDH; 1FF5; 1L3W; 1NCG; 1NCH; 1NCI; 1NCJ; 1Q1P; 1SUH; 1WYJ; 2A4E; 2A62; 2O72; 2QVF; 2QVI; 2V37; 2WCP; 2WHV; 2YQG; 2YST; 3K5R; 3K5S; 3LND; 3LNE; 3LNF; 3LNG; 3LNH; 3LNI; 3MVS; 3PPE; 3Q2L; 3Q2N; 3Q2V; 3Q2W; 3QRB; 3UBH; 4APX; 4AQ8; 4AQA; 4AQE; 4AXW; 4NQQ; 4NUM; 4NUP; 4NUQ; 4OY9; 4QD2; 4XXW; 4ZML; 4ZMN; 4ZMO; 4ZMP; 4ZMQ; 4ZMT; 4ZMV; 4ZMW; 4ZMX; 4ZMY; 4ZMZ; 4ZT1; 4ZTE; 5CYX; 5CZR; 5DZV; 5DZW; 5DZX; 5DZY; 5EQX; 5ERD; 5ERP; 5I8D; 5IRY; 5J5J; 5JYM; 5K8R; 5KJ4; 5SZQ; 5T4M; 5T4N; 5TFK; 5TFL; 5TFM; 5ULU; 5UN2; 5UZ8; 5VT8; 5VVM; 5W1D; 5WJ8; 5WJM; 6BWN; 6BX7; 6C13; 6CG6; 6CGB; 6CGS; 6CGU; 6CV7; 6CXY; 6E8F; 6EET; 6MEQ; 6MER; 6MFO; 6MGA; 6N22; 6N2E; 6OAE; 6PIM; 6QNT; 6QNU; 6SIT; 6ULM; 6VEL; 6VFP; 6VFQ; 6VFR; 6VFT; 6VFU; 6VFV; 6VFW; 6VG4; 6ZTB; 6ZTR; 7A7D; 7AGF; 7AGG; 7CME; 7CMF; 7CYM; 7EV1; 7N86; 7SKH; 7STZ; 7SZ8; 7T3S; 7T80; 7U71; 8D40; 8EGW; 8EGX; 8H62; 8HYI; 8QJX; 8QJY; 8QK3 » more |