Entry: PS00232

General information about the entry

Entry name [info] CADHERIN_1
Accession [info] PS00232
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-1990 DATA UPDATE; 15-MAR-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00205

Name and characterization of the entry

Description [info] Cadherin domain signature.
Pattern [info]
[LIV]-x-[LIV]-x-D-x-N-D-[NH]-x-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_03 which contains 553'941 sequence entries.


Total number of hits 1'502 in 309 different sequences
Number of true positive hits 1'502 in 309 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 15
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.01 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 23
Site [info] calcium(?) at position 5
Site [info] calcium(?) at position 7
Site [info] calcium(?) at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
309 sequences

CAD10_CHICK (P79995    ), CAD10_HUMAN (Q9Y6N8    ), CAD10_MOUSE (P70408    ), 
CAD11_CHICK (O93319    ), CAD11_HUMAN (P55287    ), CAD11_MOUSE (P55288    ), 
CAD12_HUMAN (P55289    ), CAD12_MOUSE (Q5RJH3    ), CAD13_BOVIN (Q3B7N0    ), 
CAD13_CHICK (P33150    ), CAD13_HUMAN (P55290    ), CAD13_MOUSE (Q9WTR5    ), 
CAD13_PONAB (Q5R5W6    ), CAD15_HUMAN (P55291    ), CAD15_MOUSE (P33146    ), 
CAD16_HUMAN (O75309    ), CAD16_MOUSE (O88338    ), CAD16_RABIT (Q28634    ), 
CAD17_HUMAN (Q12864    ), CAD17_MOUSE (Q9R100    ), CAD17_RAT   (P55281    ), 
CAD18_BOVIN (Q08DJ5    ), CAD18_HUMAN (Q13634    ), CAD19_HUMAN (Q9H159    ), 
CAD20_CHICK (Q8QGH3    ), CAD20_HUMAN (Q9HBT6    ), CAD20_MOUSE (Q9Z0M3    ), 
CAD20_RAT   (Q5DWV1    ), CAD20_XENLA (Q91838    ), CAD22_HUMAN (Q9UJ99    ), 
CAD22_MOUSE (Q9WTP5    ), CAD22_RAT   (Q63315    ), CAD23_HUMAN (Q9H251    ), 
CAD23_MOUSE (Q99PF4    ), CAD23_RAT   (P58365    ), CAD24_HUMAN (Q86UP0    ), 
CAD24_MOUSE (Q6PFX6    ), CAD26_HUMAN (Q8IXH8    ), CAD26_MOUSE (P59862    ), 
CAD2A_XENLA (P33147    ), CAD2B_XENLA (P20310    ), CAD86_DROME (Q9VGW1    ), 
CAD87_DROME (Q9VGG5    ), CAD89_DROME (Q9VEU1    ), CAD99_DROME (Q9VAF5    ), 
CADE_DROME  (Q24298    ), CADH1_BOVIN (Q6R8F2    ), CADH1_CANLF (F1PAA9    ), 
CADH1_CHICK (P08641    ), CADH1_HUMAN (P12830    ), CADH1_MOUSE (P09803    ), 
CADH1_PONAB (Q5RAX1    ), CADH1_RAT   (Q9R0T4    ), CADH1_XENLA (P30944    ), 
CADH2_BOVIN (P19534    ), CADH2_CALJA (B0KW95    ), CADH2_CHICK (P10288    ), 
CADH2_CRIGR (O55075    ), CADH2_DANRE (Q90275    ), CADH2_HUMAN (P19022    ), 
CADH2_MOUSE (P15116    ), CADH2_OTOGA (B4USZ0    ), CADH2_PONAB (Q5R9X1    ), 
CADH2_RAT   (Q9Z1Y3    ), CADH2_RHIFE (B2KI42    ), CADH3_BOVIN (P19535    ), 
CADH3_CAEEL (P34616    ), CADH3_HUMAN (P22223    ), CADH3_MOUSE (P10287    ), 
CADH3_PIG   (O18926    ), CADH4_CAEEL (Q19319    ), CADH4_CHICK (P24503    ), 
CADH4_HUMAN (P55283    ), CADH4_MOUSE (P39038    ), CADH4_RAT   (Q63149    ), 
CADH4_XENLA (P79883    ), CADH5_BOVIN (Q6URK6    ), CADH5_CHICK (Q8AYD0    ), 
CADH5_HUMAN (P33151    ), CADH5_MOUSE (P55284    ), CADH5_PIG   (O02840    ), 
CADH6_BOVIN (Q3SWX5    ), CADH6_CHICK (Q90762    ), CADH6_HUMAN (P55285    ), 
CADH6_MOUSE (P97326    ), CADH6_RAT   (P55280    ), CADH7_CHICK (Q90763    ), 
CADH7_HUMAN (Q9ULB5    ), CADH7_MOUSE (Q8BM92    ), CADH7_RAT   (Q5DWV2    ), 
CADH8_HUMAN (P55286    ), CADH8_MOUSE (P97291    ), CADH8_RAT   (O54800    ), 
CADH9_HUMAN (Q9ULB4    ), CADH9_MOUSE (P70407    ), CADHB_XENLA (P33152    ), 
CADHF_XENLA (P33148    ), CADHK_CHICK (P33145    ), CADN2_DROME (Q9VJB6    ), 
CADN_DROME  (O15943    ), CDHR1_BOVIN (Q8WN91    ), CDHR1_CHICK (Q8UVJ7    ), 
CDHR1_DANRE (Q6B3P0    ), CDHR1_HUMAN (Q96JP9    ), CDHR1_MOUSE (Q8VHP6    ), 
CDHR1_RAT   (Q91XU7    ), CDHR1_XENLA (Q6B457    ), CDHR2_HUMAN (Q9BYE9    ), 
CDHR2_MOUSE (E9Q7P9    ), CDHR4_HUMAN (A6H8M9    ), CDHR5_HUMAN (Q9HBB8    ), 
CDHR5_MOUSE (Q8VHF2    ), CDHR5_RAT   (Q9JIK1    ), CELR1_HUMAN (Q9NYQ6    ), 
CELR1_MOUSE (O35161    ), CELR2_HUMAN (Q9HCU4    ), CELR2_MOUSE (Q9R0M0    ), 
CELR2_RAT   (Q9QYP2    ), CELR3_HUMAN (Q9NYQ7    ), CELR3_MOUSE (Q91ZI0    ), 
CELR3_RAT   (O88278    ), DSC1_BOVIN  (Q01107    ), DSC1_HUMAN  (Q08554    ), 
DSC1_MOUSE  (P55849    ), DSC2_BOVIN  (P33545    ), DSC2_HUMAN  (Q02487    ), 
DSC2_MOUSE  (P55292    ), DSC3_BOVIN  (Q28060    ), DSC3_HUMAN  (Q14574    ), 
DSC3_MOUSE  (P55850    ), DSG1A_MOUSE (Q61495    ), DSG1B_MOUSE (Q7TSF1    ), 
DSG1C_MOUSE (Q7TSF0    ), DSG1_BOVIN  (Q03763    ), DSG1_CANLF  (Q9GKQ8    ), 
DSG1_HUMAN  (Q02413    ), DSG1_PIG    (Q3BDI7    ), DSG2_HUMAN  (Q14126    ), 
DSG2_MOUSE  (O55111    ), DSG3_CANLF  (Q7YRU7    ), DSG3_HUMAN  (P32926    ), 
DSG3_MOUSE  (O35902    ), DSG4_HUMAN  (Q86SJ6    ), DSG4_MOUSE  (Q7TMD7    ), 
DSG4_RAT    (Q6W3B0    ), DS_DROME    (Q24292    ), FAT1_HUMAN  (Q14517    ), 
FAT2_DROME  (Q9VW71    ), FAT2_HUMAN  (Q9NYQ8    ), FAT2_MOUSE  (Q5F226    ), 
FAT2_RAT    (O88277    ), FAT3_HUMAN  (Q8TDW7    ), FAT3_MOUSE  (Q8BNA6    ), 
FAT3_RAT    (Q8R508    ), FAT4_HUMAN  (Q6V0I7    ), FAT4_MOUSE  (Q2PZL6    ), 
FAT_DROME   (P33450    ), HMR1_CAEEL  (Q967F4    ), PC11X_GORGO (Q6X862    ), 
PC11X_HUMAN (Q9BZA7    ), PC11X_PANPA (Q6WYY1    ), PC11X_PANTR (Q71M42    ), 
PC11X_PIG   (Q6KEQ9    ), PC11X_PONPY (Q6WXV7    ), PC11Y_HUMAN (Q9BZA8    ), 
PCD10_HUMAN (Q9P2E7    ), PCD12_HUMAN (Q9NPG4    ), PCD12_MOUSE (O55134    ), 
PCD15_CHICK (Q0ZM14    ), PCD15_HUMAN (Q96QU1    ), PCD15_MOUSE (Q99PJ1    ), 
PCD16_HUMAN (Q96JQ0    ), PCD16_MOUSE (E9PVD3    ), PCD16_RAT   (D4ACX8    ), 
PCD17_HUMAN (O14917    ), PCD18_BOVIN (A7MB46    ), PCD18_HUMAN (Q9HCL0    ), 
PCD18_MOUSE (Q8VHR0    ), PCD19_HUMAN (Q8TAB3    ), PCD19_MOUSE (Q80TF3    ), 
PCD20_HUMAN (Q8N6Y1    ), PCD20_MOUSE (Q8BIZ0    ), PCD23_HUMAN (Q6V1P9    ), 
PCDA1_HUMAN (Q9Y5I3    ), PCDA1_PANTR (Q5DRF5    ), PCDA2_HUMAN (Q9Y5H9    ), 
PCDA2_PANTR (Q5DRF0    ), PCDA3_HUMAN (Q9Y5H8    ), PCDA3_PANTR (Q5DRE9    ), 
PCDA4_HUMAN (Q9UN74    ), PCDA4_MOUSE (O88689    ), PCDA4_PANTR (Q5DRE8    ), 
PCDA4_RAT   (Q767I8    ), PCDA5_HUMAN (Q9Y5H7    ), PCDA5_PANTR (Q5DRE7    ), 
PCDA6_HUMAN (Q9UN73    ), PCDA6_PANTR (Q5DRE6    ), PCDA7_HUMAN (Q9UN72    ), 
PCDA7_MOUSE (Q91Y13    ), PCDA7_PANTR (Q5DRE5    ), PCDA8_HUMAN (Q9Y5H6    ), 
PCDA8_PANTR (Q5DRE4    ), PCDA9_HUMAN (Q9Y5H5    ), PCDA9_MOUSE (Q91Y11    ), 
PCDA9_PANTR (Q5DRE3    ), PCDAA_HUMAN (Q9Y5I2    ), PCDAA_MOUSE (Q91Y20    ), 
PCDAA_PANTR (Q5DRF4    ), PCDAB_HUMAN (Q9Y5I1    ), PCDAB_PANTR (Q5DRF3    ), 
PCDAC_HUMAN (Q9UN75    ), PCDAC_PANTR (Q5DRF2    ), PCDAD_HUMAN (Q9Y5I0    ), 
PCDAD_PANTR (Q5DRF1    ), PCDB1_HUMAN (Q9Y5F3    ), PCDB1_PANTR (Q5DRE0    ), 
PCDB2_HUMAN (Q9Y5E7    ), PCDB2_PANTR (Q5DRD2    ), PCDB3_HUMAN (Q9Y5E6    ), 
PCDB3_PANTR (Q5DRD1    ), PCDB4_HUMAN (Q9Y5E5    ), PCDB4_PANTR (Q5DRD0    ), 
PCDB5_HUMAN (Q9Y5E4    ), PCDB5_PANTR (Q5DRC9    ), PCDB6_HUMAN (Q9Y5E3    ), 
PCDB6_MOUSE (Q91XZ4    ), PCDB6_PANTR (Q5DRC8    ), PCDB7_HUMAN (Q9Y5E2    ), 
PCDB7_PANTR (Q5DRC7    ), PCDB8_HUMAN (Q9UN66    ), PCDB8_MOUSE (Q91XZ2    ), 
PCDB8_PANTR (Q5DRC6    ), PCDB9_HUMAN (Q9Y5E1    ), PCDB9_PANTR (Q5DRC4    ), 
PCDBA_HUMAN (Q9UN67    ), PCDBA_PANTR (Q5DRD9    ), PCDBB_HUMAN (Q9Y5F2    ), 
PCDBB_PANTR (Q5DRD8    ), PCDBC_HUMAN (Q9Y5F1    ), PCDBC_PANTR (Q5DRD7    ), 
PCDBD_HUMAN (Q9Y5F0    ), PCDBD_PANTR (Q5DRD6    ), PCDBE_HUMAN (Q9Y5E9    ), 
PCDBE_MOUSE (Q6PB90    ), PCDBE_PANTR (Q5DRD5    ), PCDBF_HUMAN (Q9Y5E8    ), 
PCDBF_PANTR (Q5DRD3    ), PCDBG_HUMAN (Q9NRJ7    ), PCDBH_PANTR (Q5DRC3    ), 
PCDBI_HUMAN (Q96TA0    ), PCDBI_MOUSE (Q91Y02    ), PCDBI_PANTR (Q5DRD4    ), 
PCDC1_HUMAN (Q9H158    ), PCDC1_PANTR (Q5DRE2    ), PCDC2_HUMAN (Q9Y5I4    ), 
PCDC2_PANTR (Q5DRE1    ), PCDG1_HUMAN (Q9Y5H4    ), PCDG1_PANTR (Q5DRC2    ), 
PCDG2_HUMAN (Q9Y5H1    ), PCDG2_PANTR (Q5DRB8    ), PCDG3_HUMAN (Q9Y5H0    ), 
PCDG3_PANTR (Q5DRB7    ), PCDG4_HUMAN (Q9Y5G9    ), PCDG4_MOUSE (Q91XY4    ), 
PCDG4_PANTR (Q5DRB6    ), PCDG5_HUMAN (Q9Y5G8    ), PCDG5_PANTR (Q5DRB5    ), 
PCDG6_HUMAN (Q9Y5G7    ), PCDG6_PANTR (Q5DRB4    ), PCDG7_HUMAN (Q9Y5G6    ), 
PCDG7_PANTR (Q5DRB3    ), PCDG8_HUMAN (Q9Y5G5    ), PCDG8_PANTR (Q5DRB2    ), 
PCDG9_HUMAN (Q9Y5G4    ), PCDG9_PANTR (Q5DRB1    ), PCDGA_HUMAN (Q9Y5H3    ), 
PCDGA_PANTR (Q5DRC1    ), PCDGB_HUMAN (Q9Y5H2    ), PCDGB_PANTR (Q5DRC0    ), 
PCDGC_HUMAN (O60330    ), PCDGC_PANTR (Q5DRB9    ), PCDGD_HUMAN (Q9Y5G3    ), 
PCDGD_PANTR (Q5DRB0    ), PCDGE_HUMAN (Q9Y5G2    ), PCDGE_PANTR (Q5DRA9    ), 
PCDGF_HUMAN (Q9Y5G1    ), PCDGG_HUMAN (Q9UN71    ), PCDGG_PANTR (Q5DRA8    ), 
PCDGH_HUMAN (Q9Y5G0    ), PCDGH_PANTR (Q5DRA7    ), PCDGI_HUMAN (Q9Y5F9    ), 
PCDGI_PANTR (Q5DRA6    ), PCDGJ_HUMAN (Q9Y5F8    ), PCDGJ_PANTR (Q5DRA5    ), 
PCDGK_HUMAN (Q9UN70    ), PCDGK_PANTR (Q5DRA4    ), PCDGL_HUMAN (Q9Y5F7    ), 
PCDGL_PANTR (Q5DRA3    ), PCDGM_HUMAN (Q9Y5F6    ), PCDGM_PANTR (Q5DRA2    ), 
PCDH1_HUMAN (Q08174    ), PCDH3_RAT   (Q63418    ), PCDH7_HUMAN (O60245    ), 
PCDH8_HUMAN (O95206    ), PCDH8_MOUSE (Q7TSK3    ), PCDH8_RAT   (D3ZE55    ), 
PCDH9_HUMAN (Q9HC56    ), PCDL_ACRMI  (B8V7Q1    ), STAN_DROME  (Q9V5N8    )
» more

UniProtKB/Swiss-Prot
False negative sequences
15 sequences

CAD96_DROME (Q9VBW3    ), CDHR3_HUMAN (Q6ZTQ4    ), CDHR3_MOUSE (Q8BL00    ), 
CSTN1_DROME (Q9V498    ), CSTN1_HUMAN (O94985    ), CSTN1_MOUSE (Q9EPL2    ), 
CSTN2_HUMAN (Q9H4D0    ), CSTN2_MOUSE (Q9ER65    ), CSTN2_RAT   (Q8VDA1    ), 
CSTN3_BOVIN (Q0VCN6    ), CSTN3_HUMAN (Q9BQT9    ), CSTN3_MOUSE (Q99JH7    ), 
CSTN3_PONAB (Q5R9Q9    ), CSTN3_RAT   (Q8R553    ), HMU_HALWD   (Q18DN4    )
» more

PDB
[Detailed view]
67 PDB

1EDH; 1FF5; 1L3W; 1NCJ; 1Q1P; 1WYJ; 2A4E; 2A62; 2O72; 2QVF; 2QVI; 2V37; 2WCP; 2WHV; 2YQG; 2YST; 3K5R; 3K5S; 3LND; 3LNE; 3LNF; 3LNG; 3LNH; 3LNI; 3MVS; 3PPE; 3Q2L; 3Q2N; 3Q2V; 3Q2W; 3QRB; 3UBH; 4APX; 4AQ8; 4AQA; 4AQE; 4AXW; 4NQQ; 4NUM; 4NUP; 4NUQ; 4OY9; 4QD2; 4XXW; 4ZML; 4ZMN; 4ZMO; 4ZMP; 4ZMQ; 4ZMT; 4ZMV; 4ZMW; 4ZMX; 4ZMY; 4ZMZ; 4ZT1; 4ZTE; 5DZV; 5DZW; 5DZX; 5DZY; 5EQX; 5ERD; 5ERP; 5IRY; 5J5J; 5K8R
» more

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