Entry: PS00233

General information about the entry

Entry name [info] CHIT_BIND_RR_1
Accession [info] PS00233
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-2006 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00206

Name and characterization of the entry

Description [info] Chitin-binding type R&R domain signature.
Pattern [info] 
G-x(7)-[DEN]-G-x(6)-[FY]-x-A-[DNG]-x(2,3)-G-[FY]-x-[APV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 71 in 71 different sequences
Number of true positive hits 70 in 70 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 9
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 98.59 %
Recall (true positives / (true positives + false negatives)) 88.61 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 70 sequences 

CU01_ANOGA  (Q17015    ), CU02_HOMAM  (P81386    ), CU02_LONON  (P85196    ), 

CU03_HOMAM  (P81387    ), CU03_LONON  (P85197    ), CU04_HOMAM  (P81388    ), 
CU05_HOMAM  (P81389    ), CU07_LOCMI  (P11733    ), CU08_LOCMI  (P11734    ), 
CU109_IXORI (P84251    ), CU12_HYACE  (P45589    ), CU14A_LIMPO (P83354    ), 
CU14B_LIMPO (P83355    ), CU14_MANSE  (P13229    ), CU15_MANSE  (Q94984    ), 
CU168_IXORI (P84252    ), CU16_MANSE  (Q25504    ), CU17_BOMMO  (O02387    ), 
CU18A_LOCMI (P83994    ), CU18B_LOCMI (P83995    ), CU198_LOCMI (P82166    ), 
CU19_ARADI  (P80515    ), CU19_LOCMI  (P45583    ), CU1A_HOMAM  (P81384    ), 
CU1B_HOMAM  (P81385    ), CU20_MANSE  (Q8T635    ), CU20_TENMO  (P26967    ), 
CU21_LOCMI  (P81225    ), CU22_BOMMO  (O02388    ), CU24_ARADI  (P80516    ), 
CU26_ARADI  (P80517    ), CU30_BOMMO  (Q08738    ), CU36_MANSE  (Q8MUC5    ), 
CU55_ARADI  (P80518    ), CU57_ARADI  (P80519    ), CU66_HYACE  (P45590    ), 
CUA1A_TENMO (P80681    ), CUA2B_TENMO (P80682    ), CUA3A_TENMO (P80683    ), 
CUD1_SCHGR  (Q7M4F4    ), CUD2_SCHGR  (Q7M4F3    ), CUD4_LOCMI  (P21799    ), 
CUD4_SCHGR  (Q7M4F1    ), CUD5_LOCMI  (P56561    ), CUD5_SCHGR  (P56562    ), 
CUD6_SCHGR  (Q7M4E8    ), CUD8_SCHGR  (Q7M4F2    ), CUD9_SCHGR  (Q7M4F0    ), 
CULP1_HELAM (O02443    ), CUO7_BLACR  (P82120    ), CUO8_BLACR  (P82121    ), 
CUP7_DROME  (P27779    ), CUP8_DROME  (P27780    ), CUPA1_CANPG (P81575    ), 
CUPA2_CANPG (P81576    ), CUPA3_CANPG (P81577    ), CUPA4_CANPG (P81578    ), 
CUPA5_CANPG (P81579    ), CUPP_DROME  (P14484    ), CUPP_DROPS  (P16369    ), 
LCP1_DROME  (P02839    ), LCP1_DROMI  (P91627    ), LCP2_DROME  (P07187    ), 
LCP2_DROMI  (P91629    ), LCP34_DROMI (Q01774    ), LCP3_DROME  (P07188    ), 
LCP4_DROME  (P07189    ), LCP8_DROME  (P92201    ), LCP9_DROME  (P82384    ), 
RESIL_DROME (Q9V7U0    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

CU22_TENMO  (P26968    ), CU27_MANSE  (Q8T4J9    ), CU36A_MANSE (Q8T634    ), 

CUC11_CANPG (P81589    ), CUD3_SCHGR  (Q7M4E9    ), CUO6_BLACR  (P82119    ), 
LCP2A_DROME (Q7JZV0    ), LCP5_DROME  (P92192    ), MBN_DROME   (P52302    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 3 sequences 

CUP1_NEOBL  (P14485    ), CUP4_NEOBL  (P14486    ), CUP6_NEOBL  (P14487    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
OXDD_BACSU  (O34767    )


				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission