Entry: PS00242

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General information about the entry

Entry name [info] INTEGRIN_ALPHA
Accession [info] PS00242
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); JUN-1994 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00215

Name and characterization of the entry

Description [info] Integrins alpha chain signature.
Pattern [info]
[FYWS]-[RK]-x-G-F-F-x-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 61 in 61 different sequences
Number of true positive hits 52 in 52 different sequences
Number of 'unknown' hits
Number of false positive hits 9 in 9 different sequences
Number of false negative sequences 3
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 85.25 %
Recall (true positives / (true positives + false negatives)) 94.55 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
52 sequences

INA1_CAEEL  (Q03600), ITA1_DROME  (Q24247), ITA1_HUMAN  (P56199), 
ITA1_MOUSE  (Q3V3R4), ITA1_RAT    (P18614), ITA2B_HUMAN (P08514), 
ITA2B_MOUSE (Q9QUM0), ITA2B_PAPCY (P53711), ITA2_BOVIN  (P53710), 
ITA2_DROME  (P12080), ITA2_HUMAN  (P17301), ITA2_MOUSE  (Q62469), 
ITA3_BOVIN  (F1MMS9), ITA3_CRIGR  (P17852), ITA3_DROME  (O44386), 
ITA3_HUMAN  (P26006), ITA3_MOUSE  (Q62470), ITA4_DROME  (Q9V7A4), 
ITA4_HUMAN  (P13612), ITA4_MOUSE  (Q00651), ITA4_XENLA  (Q91687), 
ITA5_HUMAN  (P08648), ITA5_MOUSE  (P11688), ITA5_XENLA  (Q06274), 
ITA6_CHICK  (P26007), ITA6_HUMAN  (P23229), ITA6_MOUSE  (Q61739), 
ITA7_HUMAN  (Q13683), ITA7_MOUSE  (Q61738), ITA7_RAT    (Q63258), 
ITA8_CHICK  (P26009), ITA8_HUMAN  (P53708), ITA8_MOUSE  (A2ARA8), 
ITA9_HUMAN  (Q13797), ITAD_HUMAN  (Q13349), ITAD_MOUSE  (Q3V0T4), 
ITAD_RAT    (Q9QYE7), ITAE_HUMAN  (P38570), ITAE_MOUSE  (Q60677), 
ITAL_BOVIN  (P61625), ITAL_HUMAN  (P20701), ITAL_MOUSE  (P24063), 
ITAM_HUMAN  (P11215), ITAM_MOUSE  (P05555), ITAV_BOVIN  (P80746), 
ITAV_CHICK  (P26008), ITAV_HUMAN  (P06756), ITAV_MOUSE  (P43406), 
ITAX_HUMAN  (P20702), ITAX_MOUSE  (Q9QXH4), PAT2_CAEBR  (A8X3A7), 
PAT2_CAEEL  (P34446)
» More

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

ITA10_HUMAN (O75578), ITA11_HUMAN (Q9UKX5), ITA11_MOUSE (P61622)

		
UniProtKB/Swiss-Prot
'Partial' sequences
3 sequences

ITA1_CHICK  (Q90615), ITA5_BOVIN  (Q27977), ITAM_CAVPO  (P11578)

		
UniProtKB/Swiss-Prot
False positive sequences
9 sequences

GRK1_CAEBR  (Q622Z7), GRK1_CAEEL  (Q09537), NAAT1_DROAN (B3MRS1), 
NAAT1_DROER (B3NV41), NAAT1_DROME (Q9W4C5), NAAT1_DROSI (B4R4T6), 
NAAT1_DROYA (B4PZQ4), POM1_SCHPO  (Q09690), Y736_HAEIN  (P44849)
» More

PDB
[Detailed view]
7 PDB

1KUP; 1KUZ; 2K1A; 2K9J; 2KNC; 2L8S; 2M3E

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