Entry: PS00242

General information about the entry

Entry name [info] INTEGRIN_ALPHA
Accession [info] PS00242
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); JUN-1994 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00215

Name and characterization of the entry

Description [info] Integrins alpha chain signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 62 in 62 different sequences
Number of true positive hits 53 in 53 different sequences
Number of 'unknown' hits 0
Number of false positive hits 9 in 9 different sequences
Number of false negative sequences 3
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 85.48 %
Recall (true positives / (true positives + false negatives)) 94.64 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
53 sequences

INA1_CAEEL  (Q03600), ITA1_DROME  (Q24247), ITA1_HUMAN  (P56199), 
ITA1_MOUSE  (Q3V3R4), ITA1_RAT    (P18614), ITA2B_HUMAN (P08514), 
ITA2B_MOUSE (Q9QUM0), ITA2B_PAPCY (P53711), ITA2_BOVIN  (P53710), 
ITA2_DROME  (P12080), ITA2_HUMAN  (P17301), ITA2_MOUSE  (Q62469), 
ITA3_BOVIN  (F1MMS9), ITA3_CRIGR  (P17852), ITA3_DROME  (O44386), 
ITA3_HUMAN  (P26006), ITA3_MOUSE  (Q62470), ITA4_DROME  (Q9V7A4), 
ITA4_HUMAN  (P13612), ITA4_MOUSE  (Q00651), ITA4_XENLA  (Q91687), 
ITA5_HUMAN  (P08648), ITA5_MOUSE  (P11688), ITA5_XENLA  (Q06274), 
ITA6_CHICK  (P26007), ITA6_HUMAN  (P23229), ITA6_MOUSE  (Q61739), 
ITA7_HUMAN  (Q13683), ITA7_MOUSE  (Q61738), ITA7_RAT    (Q63258), 
ITA8_CHICK  (P26009), ITA8_HUMAN  (P53708), ITA8_MOUSE  (A2ARA8), 
ITA9_HUMAN  (Q13797), ITA9_MOUSE  (B8JK39), ITAD_HUMAN  (Q13349), 
ITAD_MOUSE  (Q3V0T4), ITAD_RAT    (Q9QYE7), ITAE_HUMAN  (P38570), 
ITAE_MOUSE  (Q60677), ITAL_BOVIN  (P61625), ITAL_HUMAN  (P20701), 
ITAL_MOUSE  (P24063), ITAM_HUMAN  (P11215), ITAM_MOUSE  (P05555), 
ITAV_BOVIN  (P80746), ITAV_CHICK  (P26008), ITAV_HUMAN  (P06756), 
ITAV_MOUSE  (P43406), ITAX_HUMAN  (P20702), ITAX_MOUSE  (Q9QXH4), 
PAT2_CAEBR  (A8X3A7), PAT2_CAEEL  (P34446)
» more

False negative sequences
3 sequences

ITA10_HUMAN (O75578), ITA11_HUMAN (Q9UKX5), ITA11_MOUSE (P61622)

'Partial' sequences
3 sequences

ITA1_CHICK  (Q90615), ITA5_BOVIN  (Q27977), ITAM_CAVPO  (P11578)

False positive sequences
9 sequences

GRK1_CAEBR  (Q622Z7), GRK1_CAEEL  (Q09537), NAAT1_DROAN (B3MRS1), 
NAAT1_DROYA (B4PZQ4), POM1_SCHPO  (Q09690), Y736_HAEIN  (P44849)
» more

[Detailed view]

1KUP; 1KUZ; 2K1A; 2K9J; 2KNC; 2L8S; 2M3E; 2MTP

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