Entry: PS00243

General information about the entry

Entry name [info] INTEGRIN_BETA
Accession [info] PS00243
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); MAR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00216

Name and characterization of the entry

Description [info] Integrins beta chain cysteine-rich domain signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_05 which contains 548'454 sequence entries.

Total number of hits 149 in 48 different sequences
Number of true positive hits 149 in 48 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 10
Site [info] disulfide(?) at position 1
Site [info] disulfide(?) at position 7
Site [info] disulfide(?) at position 9
Site [info] disulfide(?) at position 11
Site [info] disulfide(?) at position 13
Version [info] 1

Cross-references [info]

True positive sequences
48 sequences

ITB1A_XENLA (P12606), ITB1B_XENLA (P12607), ITB1_BOVIN  (P53712), 
ITB1_CAMBA  (A5Z1X6), ITB1_CHICK  (P07228), ITB1_FELCA  (P53713), 
ITB1_HUMAN  (P05556), ITB1_MOUSE  (P09055), ITB1_PIG    (Q9GLP0), 
ITB1_PONAB  (Q5RCA9), ITB1_RAT    (P49134), ITB1_SHEEP  (B0FYY4), 
ITB2L_MOUSE (Q3UV74), ITB2_BOVIN  (P32592), ITB2_CAPHI  (Q5VI41), 
ITB2_HUMAN  (P05107), ITB2_MOUSE  (P11835), ITB2_OVICA  (Q2VJ42), 
ITB2_PIG    (P53714), ITB2_SHEEP  (Q6ECI6), ITB3_HUMAN  (P05106), 
ITB3_MOUSE  (O54890), ITB4_HUMAN  (P16144), ITB4_MOUSE  (A2A863), 
ITB4_RAT    (Q64632), ITB5_BOVIN  (P80747), ITB5_HUMAN  (P18084), 
ITB5_MOUSE  (O70309), ITB5_PAPCY  (Q07441), ITB6_BOVIN  (Q8SQB8), 
ITB6_CAVPO  (P18563), ITB6_HUMAN  (P18564), ITB6_MOUSE  (Q9Z0T9), 
ITB6_PIG    (Q1RPR6), ITB6_RAT    (Q6AYF4), ITB6_SHEEP  (Q863C4), 
ITB7_HUMAN  (P26010), ITB7_MOUSE  (P26011), ITB8_HUMAN  (P26012), 
ITB8_RABIT  (P26013), ITBL_CAEEL  (Q9GYK2), ITBN_DROME  (Q27591), 
» More

[Detailed view]
21 PDB

1JV2; 1L3Y; 1L5G; 1M1X; 1U8C; 2P26; 2P28; 3FCS; 3IJE; 3K6S; 3K71; 3K72; 4CAK; 4G1E; 4G1M; 4MMX; 4MMY; 4MMZ; 4NEH; 4NEN; 4O02
» More

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