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Entry: PS00248

General information about the entry

Entry name [info] NGF_1
Accession [info] PS00248
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-2006 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00221

Name and characterization of the entry

Description [info] Nerve growth factor family signature.
Pattern [info]
[GSRE]-C-[KRL]-G-[LIVT]-[DE]-x(3)-[YW]-x-S-x-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 117 in 117 different sequences
Number of true positive hits 117 in 117 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 27
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.15 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 2
Site [info] disulfide at position 12
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
117 sequences

BDNF_ACRDU  (Q1X706    ), BDNF_ACRJA  (Q1X702    ), BDNF_AILFU  (O97759    ), 
BDNF_AILME  (Q6LCI5    ), BDNF_ANISC  (Q1X700    ), BDNF_ASPME  (Q1HN40    ), 
BDNF_BOACO  (Q1X708    ), BDNF_BOVIN  (Q95106    ), BDNF_CALRI  (Q1X6Z7    ), 
BDNF_CANCA  (Q1X707    ), BDNF_CANLF  (Q7YRB4    ), BDNF_CAVPO  (O70183    ), 
BDNF_CHABO  (Q1X6Z6    ), BDNF_CHICK  (P25429    ), BDNF_CHISR  (Q1HN42    ), 
BDNF_CORCI  (Q1X711    ), BDNF_CYCMA  (Q8QG74    ), BDNF_CYLRU  (Q1X701    ), 
BDNF_CYPCA  (Q90322    ), BDNF_EPICE  (Q1X710    ), BDNF_ERYCC  (Q1HN34    ), 
BDNF_ERYCN  (Q1X6Z8    ), BDNF_ERYJO  (Q1HN32    ), BDNF_ERYJY  (Q1HN36    ), 
BDNF_EUNNO  (Q1X709    ), BDNF_EXIPL  (Q1X704    ), BDNF_FELCA  (Q9TST3    ), 
BDNF_HELMA  (O18753    ), BDNF_HORSE  (Q0EAB7    ), BDNF_HUMAN  (P23560    ), 
BDNF_LICTR  (Q1HN31    ), BDNF_LIPVE  (Q49M28    ), BDNF_LOXBI  (Q1HN33    ), 
BDNF_MACLB  (P25431    ), BDNF_MACMU  (Q06225    ), BDNF_MORSI  (Q1X703    ), 
BDNF_MOUSE  (P21237    ), BDNF_PANTR  (Q5IS78    ), BDNF_PIG    (P14082    ), 
BDNF_PROLO  (O18755    ), BDNF_RAJCL  (P25430    ), BDNF_RAMSP  (Q1X6Z5    ), 
BDNF_RAT    (P23363    ), BDNF_SANME  (Q1X705    ), BDNF_SPECI  (Q4L0Y3    ), 
BDNF_TROHA  (Q1X6Z9    ), BDNF_URSAR  (O18752    ), BDNF_URSTH  (Q3SAT7    ), 
BDNF_XENLA  (P25432    ), BDNF_XENUN  (Q1HN38    ), BDNF_XIPMA  (Q02193    ), 
NGFV1_AZEFE (Q2XXL6    ), NGFV1_DEMVE (A6MFL5    ), NGFV1_HOPST (Q3HXY0    ), 
NGFV1_NAJSP (Q5YF90    ), NGFV1_NOTSC (Q3HXY7    ), NGFV1_OXYMI (Q3HXZ1    ), 
NGFV1_PSEAU (Q3HXY3    ), NGFV1_PSETE (Q3HXY9    ), NGFV1_TROCA (Q3HXX8    ), 
NGFV2_DEMVE (A6MFL6    ), NGFV2_HOPST (Q3HXX9    ), NGFV2_NAJSP (Q5YF89    ), 
NGFV2_OXYMI (Q3HXZ0    ), NGFV2_PSEAU (Q3HXY2    ), NGFV2_PSETE (Q3HXY8    ), 
NGFV2_TROCA (Q3HXX7    ), NGFV3_DEMVE (A6MFL7    ), NGFV3_NOTSC (Q3HXY5    ), 
NGFV3_PSEAU (Q3HXY1    ), NGFV3_TROCA (Q3HXX6    ), NGFV4_TROCA (Q3HXX5    ), 
NGFV5_TROCA (Q3HXX4    ), NGFV_AGKCO  (B8QCG6    ), NGFV_BOTJR  (Q90W38    ), 
NGFV_BUNMU  (P34128    ), NGFV_CRODU  (Q9DEZ9    ), NGFV_CRYNI  (Q1W7Q6    ), 
NGFV_DABRR  (P30894    ), NGFV_DRYCN  (F8RKW5    ), NGFV_MACLB  (P25428    ), 
NGFV_NAJAT  (P61898    ), NGFV_NAJKA  (P61899    ), NGFV_NAJNA  (P01140    ), 
NGFV_OXYSC  (Q3I5F4    ), NGFV_PSEPO  (Q3HXY4    ), NGF_BOVIN   (P13600    ), 
NGF_CAVPO   (P19093    ), NGF_CHICK   (P05200    ), NGF_DANRE   (Q6YBR5    ), 
NGF_GORGO   (Q9N2F0    ), NGF_HUMAN   (P01138    ), NGF_MASNA   (P20675    ), 
NGF_MOUSE   (P01139    ), NGF_PANTR   (Q9N2F1    ), NGF_PIG     (Q29074    ), 
NGF_PONPY   (Q9N2E9    ), NGF_RAT     (P25427    ), NGF_SAIBB   (Q5ISB0    ), 
NGF_XENLA   (P21617    ), NGF_XIPMA   (P34129    ), NTF3_BOVIN  (Q08DT3    ), 
NTF3_CHICK  (P25433    ), NTF3_FELCA  (Q9TST2    ), NTF3_HUMAN  (P20783    ), 
NTF3_MOUSE  (P20181    ), NTF3_PIG    (Q06AV0    ), NTF3_RAJCL  (P25434    ), 
NTF3_RAT    (P18280    ), NTF3_XENLA  (P25435    ), NTF4_HUMAN  (P34130    ), 
NTF4_MACLB  (P25436    ), NTF4_MOUSE  (Q80VU4    ), NTF4_RAT    (P34131    ), 
NTF4_XENLA  (P24727    ), NTF7_CYPCA  (O93474    ), NTF7_DANRE  (O73797    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

NGFV2_NOTSC (Q3HXY6    )

		
UniProtKB/Swiss-Prot
'Partial' sequences
27 sequences

NGFV_BOTCO  (P0DMG7    ), NGFV_ECHOC  (P0DMD1    ), NTF3_ACRDU  (Q1X6Y9    ), 
NTF3_ACRJA  (Q1X6Y5    ), NTF3_ANISC  (Q1X6Y3    ), NTF3_ASPME  (Q1KN21    ), 
NTF3_BOACO  (Q1X6Z1    ), NTF3_CALRI  (Q1X6Y0    ), NTF3_CANCA  (Q1X6Z0    ), 
NTF3_CEREL  (Q95150    ), NTF3_CHABO  (Q1X6X9    ), NTF3_CHISR  (Q1KN23    ), 
NTF3_CORCI  (Q1X6Z4    ), NTF3_CYLRU  (Q1X6Y4    ), NTF3_EPICE  (Q1X6Z3    ), 
NTF3_ERYCC  (Q1KN16    ), NTF3_ERYCN  (Q1X6Y1    ), NTF3_ERYJO  (Q1KN12    ), 
NTF3_EUNNO  (Q1X6Z2    ), NTF3_EXIPL  (Q1X6Y7    ), NTF3_LICTR  (Q1KN10    ), 
NTF3_LOXBI  (Q1KN14    ), NTF3_MORSI  (Q1X6Y6    ), NTF3_RAMSP  (Q1X6X8    ), 
NTF3_SANME  (Q1X6Y8    ), NTF3_TROHA  (Q1X6Y2    ), NTF3_XENUN  (Q1KN19    )
» more

PDB
[Detailed view]
20 PDB

1B8K; 1B8M; 1B98; 1BET; 1BND; 1BTG; 1HCF; 1NT3; 1SG1; 1SGF; 1WWW; 2IFG; 3BUK; 3IJ2; 4EAX; 4EC7; 4EDW; 4EDX; 4XPJ; 4ZBN
» more

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