Entry: PS00248

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General information about the entry

Entry name [info] NGF_1
Accession [info] PS00248
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00221

Name and characterization of the entry

Description [info] Nerve growth factor family signature.
Pattern [info]
[GSRE]-C-[KRL]-G-[LIVT]-[DE]-x(3)-[YW]-x-S-x-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 117 in 117 different sequences
Number of true positive hits 117 in 117 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 27
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.15 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 2
Site [info] disulfide at position 12
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
117 sequences

BDNF_ACRDU  (Q1X706), BDNF_ACRJA  (Q1X702), BDNF_AILFU  (O97759), 
BDNF_AILME  (Q6LCI5), BDNF_ANISC  (Q1X700), BDNF_ASPME  (Q1HN40), 
BDNF_BOACO  (Q1X708), BDNF_BOVIN  (Q95106), BDNF_CALRI  (Q1X6Z7), 
BDNF_CANCA  (Q1X707), BDNF_CANFA  (Q7YRB4), BDNF_CAVPO  (O70183), 
BDNF_CHABO  (Q1X6Z6), BDNF_CHICK  (P25429), BDNF_CHISR  (Q1HN42), 
BDNF_CORCI  (Q1X711), BDNF_CYCMA  (Q8QG74), BDNF_CYLRU  (Q1X701), 
BDNF_CYPCA  (Q90322), BDNF_EPICE  (Q1X710), BDNF_ERYCC  (Q1HN34), 
BDNF_ERYCN  (Q1X6Z8), BDNF_ERYJO  (Q1HN32), BDNF_ERYJY  (Q1HN36), 
BDNF_EUNNO  (Q1X709), BDNF_EXIPL  (Q1X704), BDNF_FELCA  (Q9TST3), 
BDNF_HELMA  (O18753), BDNF_HORSE  (Q0EAB7), BDNF_HUMAN  (P23560), 
BDNF_LICTR  (Q1HN31), BDNF_LIPVE  (Q49M28), BDNF_LOXBI  (Q1HN33), 
BDNF_MACLB  (P25431), BDNF_MACMU  (Q06225), BDNF_MORSI  (Q1X703), 
BDNF_MOUSE  (P21237), BDNF_PANTR  (Q5IS78), BDNF_PIG    (P14082), 
BDNF_PROLO  (O18755), BDNF_RAJCL  (P25430), BDNF_RAMSP  (Q1X6Z5), 
BDNF_RAT    (P23363), BDNF_SANME  (Q1X705), BDNF_SPECI  (Q4L0Y3), 
BDNF_TROHA  (Q1X6Z9), BDNF_URSAR  (O18752), BDNF_URSTH  (Q3SAT7), 
BDNF_XENLA  (P25432), BDNF_XENUN  (Q1HN38), BDNF_XIPMA  (Q02193), 
NGFV1_AZEFE (Q2XXL6), NGFV1_DEMVE (A6MFL5), NGFV1_HOPST (Q3HXY0), 
NGFV1_NAJSP (Q5YF90), NGFV1_NOTSC (Q3HXY7), NGFV1_OXYMI (Q3HXZ1), 
NGFV1_PSEAU (Q3HXY3), NGFV1_PSETE (Q3HXY9), NGFV1_TROCA (Q3HXX8), 
NGFV2_DEMVE (A6MFL6), NGFV2_HOPST (Q3HXX9), NGFV2_NAJSP (Q5YF89), 
NGFV2_OXYMI (Q3HXZ0), NGFV2_PSEAU (Q3HXY2), NGFV2_PSETE (Q3HXY8), 
NGFV2_TROCA (Q3HXX7), NGFV3_DEMVE (A6MFL7), NGFV3_NOTSC (Q3HXY5), 
NGFV3_PSEAU (Q3HXY1), NGFV3_TROCA (Q3HXX6), NGFV4_TROCA (Q3HXX5), 
NGFV5_TROCA (Q3HXX4), NGFV_AGKCO  (B8QCG6), NGFV_BOTJR  (Q90W38), 
NGFV_BUNMU  (P34128), NGFV_CRODU  (Q9DEZ9), NGFV_DABRR  (P30894), 
NGFV_DRYCN  (F8RKW5), NGFV_MACLB  (P25428), NGFV_NAJAT  (P61898), 
NGFV_NAJKA  (P61899), NGFV_NAJNA  (P01140), NGFV_OXYSC  (Q3I5F4), 
NGFV_PSEPO  (Q3HXY4), NGFV_RHING  (Q1W7Q6), NGF_BOVIN   (P13600), 
NGF_CAVPO   (P19093), NGF_CHICK   (P05200), NGF_DANRE   (Q6YBR5), 
NGF_GORGO   (Q9N2F0), NGF_HUMAN   (P01138), NGF_MASNA   (P20675), 
NGF_MOUSE   (P01139), NGF_PANTR   (Q9N2F1), NGF_PIG     (Q29074), 
NGF_PONPY   (Q9N2E9), NGF_RAT     (P25427), NGF_SAIBB   (Q5ISB0), 
NGF_XENLA   (P21617), NGF_XIPMA   (P34129), NTF3_BOVIN  (Q08DT3), 
NTF3_CHICK  (P25433), NTF3_FELCA  (Q9TST2), NTF3_HUMAN  (P20783), 
NTF3_MOUSE  (P20181), NTF3_PIG    (Q06AV0), NTF3_RAJCL  (P25434), 
NTF3_RAT    (P18280), NTF3_XENLA  (P25435), NTF4_HUMAN  (P34130), 
NTF4_MACLB  (P25436), NTF4_MOUSE  (Q80VU4), NTF4_RAT    (P34131), 
NTF4_XENLA  (P24727), NTF7_CYPCA  (O93474), NTF7_DANRE  (O73797)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

NGFV2_NOTSC (Q3HXY6)

		
UniProtKB/Swiss-Prot
'Partial' sequences
27 sequences

NGFV_BOTCO  (P0DMG7), NGFV_ECHOC  (P0DMD1), NTF3_ACRDU  (Q1X6Y9), 
NTF3_ACRJA  (Q1X6Y5), NTF3_ANISC  (Q1X6Y3), NTF3_ASPME  (Q1KN21), 
NTF3_BOACO  (Q1X6Z1), NTF3_CALRI  (Q1X6Y0), NTF3_CANCA  (Q1X6Z0), 
NTF3_CEREL  (Q95150), NTF3_CHABO  (Q1X6X9), NTF3_CHISR  (Q1KN23), 
NTF3_CORCI  (Q1X6Z4), NTF3_CYLRU  (Q1X6Y4), NTF3_EPICE  (Q1X6Z3), 
NTF3_ERYCC  (Q1KN16), NTF3_ERYCN  (Q1X6Y1), NTF3_ERYJO  (Q1KN12), 
NTF3_EUNNO  (Q1X6Z2), NTF3_EXIPL  (Q1X6Y7), NTF3_LICTR  (Q1KN10), 
NTF3_LOXBI  (Q1KN14), NTF3_MORSI  (Q1X6Y6), NTF3_RAMSP  (Q1X6X8), 
NTF3_SANME  (Q1X6Y8), NTF3_TROHA  (Q1X6Y2), NTF3_XENUN  (Q1KN19)
» More

PDB
[Detailed view]
16 PDB

1B8K; 1B8M; 1B98; 1BET; 1BND; 1BTG; 1HCF; 1NT3; 1SG1; 1SGF; 1WWW; 2IFG; 3BUK; 3IJ2; 4EAX; 4EC7
» More

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