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| Entry: PS00249 |
| General information about the entry | |
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| Entry name | PDGF_1 |
| Accession number | PS00249 |
| Entry type | PATTERN |
| Date | APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC00222 |
| Name and characterization of the entry | |
| Description | Platelet-derived growth factor (PDGF) family signature. |
| Pattern | P-[PSR]-C-V-x(3)-R-C-[GSTA]-G-C-C. |
| Numerical results | |
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| Comments | |
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| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:PDGFA_BOVIN (Q2KJ15), PDGFA_HUMAN (P04085), PDGFA_MOUSE (P20033), PDGFA_RABIT (P34007), PDGFA_RAT (P28576), PDGFA_XENLA (P13698), PDGFB_CANFA (Q6Q7I7), PDGFB_FELCA (P12919), PDGFB_HUMAN (P01127), PDGFB_MOUSE (P31240), PDGFB_RAT (Q05028), PDGFB_SHEEP (Q95229), PLGF_BOVIN (Q9XS47), PLGF_HUMAN (P49763), PLGF_MOUSE (P49764), PLGF_RAT (Q63434), TSIS_WMSV (P01128), TXVE1_SISCA (B0VXV3), TXVE2_MACLB (P82475), TXVE2_PROMU (Q330K6), TXVE_AGKPI (C0K3N2), TXVE_BITAR (C0K3N1), TXVE_BOTER (Q6J936), TXVE_BOTIN (Q90X24), TXVE_BOTJA (Q90X23), TXVE_CROAT (C0K3N3), TXVE_DABRR (P67861), TXVE_PROFL (P67862), TXVE_SISCA (B0VXV4), TXVE_VIPAA (P67863), TXVE_VIPAP (P83942), VEGFA_AGKPI (C0K3N4), VEGFA_BITGA (P83906), VEGFA_BOVIN (P15691), VEGFA_CANFA (Q9MYV3), VEGFA_CAVPO (P26617), VEGFA_CHICK (P67964), VEGFA_COTJA (P67965), VEGFA_HORSE (Q9GKR0), VEGFA_HUMAN (P15692), VEGFA_MESAU (Q99PS1), VEGFA_MOUSE (Q00731), VEGFA_PIG (P49151), VEGFA_PROFL (P67860), VEGFA_RAT (P16612), VEGFA_SHEEP (P50412), VEGFA_VIPAA (C0K3N5), VEGFB_BOVIN (Q9XS49), VEGFB_HUMAN (P49765), VEGFB_MOUSE (P49766), VEGFB_RAT (O35485), VEGFC_HUMAN (P49767), VEGFC_MOUSE (P97953), VEGFC_RAT (O35757), VEGFD_HUMAN (O43915), VEGFD_MOUSE (P97946), VEGFD_RAT (O35251), VEGFH_ORFN2 (P52584), VEGFH_ORFN7 (P52585), VGFAA_DANRE (O73682)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): PDGFC_CHICK (Q9I946), PDGFC_GECJA (A8WCC4), PDGFC_HUMAN (Q9NRA1), PDGFC_MOUSE (Q8CI19), PDGFC_RAT (Q9EQX6), PDGFD_HUMAN (Q9GZP0), PDGFD_MOUSE (Q925I7), PDGFD_PONAB (Q5RA73), PDGFD_RABIT (Q6V9H4), PDGFD_RAT (Q9EQT1)`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences): PDGFB_PIG (P20034)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
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| PDB [Detailed view] |
1BJ1; 1CZ8; 1FLT; 1FZV; 1KAT; 1OWU; 1PDG; 1QTY; 1RV6; 1TZH; 1TZI; 1VPF; 1VPP; 1WQ8; 1WQ9; 2C7W; 2DZ4; 2DZ5; 2FJG; 2FJH; 2GNN; 2QR0; 2VPF; 2VWE; 2X1W; 2X1X; 2XAC; 2XV7; 3BDY; 3MJG; 3MJK; 3P9W; 3QTK; 3S1B; 3S1K; 3V2A; 3V6B; 4GLN; 4GLS; 4HQU; 4HQX; |
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