Entry: PS00259

General information about the entry

Entry name [info] GASTRIN
Accession [info] PS00259
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00232

Name and characterization of the entry

Description [info] Gastrin / cholecystokinin family signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 133 in 113 different sequences
Number of true positive hits 132 in 112 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 10
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.25 %
Recall (true positives / (true positives + false negatives)) 92.96 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 4
Site [info] sulfatation at position 1
Version [info] 1

Cross-references [info]

True positive sequences
112 sequences

ANTR_CHICK  (P09859), ANTR_LITCT  (P80111), ANTR_TRASC  (P80110), 
CAE11_LITRO (P86506), CAER1_XENLA (P05222), CAER3_XENLA (P05224), 
CAER4_XENBO (P05226), CAER4_XENLA (P01357), CAER5_XENLA (P05225), 
CAER_LITPE  (P86486), CAER_LITXA  (P56264), CAER_PHAJA  (P86625), 
CCKN_BOVIN  (P41520), CCKN_CANLF  (Q9TS44), CCKN_CARAU  (O93464), 
CCKN_CHICK  (Q9PU41), CCKN_DASVI  (P68125), CCKN_HUMAN  (P06307), 
CCKN_LITCT  (P80344), CCKN_MACEU  (P68126), CCKN_MACFA  (P23362), 
CCKN_MACGI  (P0C229), CCKN_MOUSE  (P09240), CCKN_PAROL  (O57312), 
CCKN_PIG    (P01356), CCKN_RAT    (P01355), CCKN_STRCA  (Q9PU29), 
CCKN_TRASC  (P80345), CCK_PYTMO   (Q8JHB9), CCT1_VARVA  (E2E4E4), 
CION_CIOIN  (P16240), CSK_CALVO   (Q7M3V5), DSK_DROER   (B2ZB95), 
DSK_DROMA   (B2ZB96), DSK_DROME   (P09040), DSK_DROPS   (Q295C6), 
DSK_DROYA   (B2ZBA1), GAST_BOVIN  (P01352), GAST_CANLF  (P01353), 
GAST_CAPHI  (P04564), GAST_CAVPO  (P06885), GAST_CHICH  (P10034), 
GAST_DIDVI  (P33713), GAST_FELCA  (P01354), GAST_HORSE  (P55885), 
GAST_HUMAN  (P01350), GAST_MACGI  (P0C228), GAST_MACMU  (P33714), 
GAST_MOUSE  (P48757), GAST_PIG    (P01351), GAST_RAT    (P04563), 
GAST_SHEEP  (O02686), LOSK_LOCMI  (P47733), LSK2_PERAM  (P67803), 
LSK2_RHYMA  (P67802), NSK1_NEOBL  (P41492), NSK2_NEOBL  (P41493), 
SK1_APTFU   (P85534), SK1_ARCTE   (P85539), SK1_BANRO   (P85544), 
SK1_BLACR   (P85547), SK1_BLADU   (P85550), SK1_BLAGE   (P85555), 
SK1_BLAOR   (P85560), SK1_BLEDI   (P85566), SK1_CRYDW   (P85571), 
SK1_CRYKY   (P85576), SK1_DELRA   (B3EWM3), SK1_DERAT   (P85598), 
SK1_DERER   (P85586), SK1_DERIN   (P85592), SK1_DIPPU   (P85603), 
SK1_ELLSS   (P85852), SK1_ERGCA   (P85613), SK1_EUBDI   (P85619), 
SK1_EUBPO   (P85625), SK1_EUBSB   (P85631), SK1_EURFL   (P85847), 
SK1_GROGR   (P85640), SK1_GROPO   (P85642), SK1_GYNCS   (P85850), 
SK1_GYNLU   (P85652), SK1_LUCGR   (P85665), SK1_LUCSU   (P85671), 
SK1_LUCVE   (P85677), SK1_MASDA   (P85683), SK1_NEORO   (P85686), 
SK1_PANSB   (P85692), SK1_PANSS   (P85698), SK1_PANVI   (P85854), 
SK1_PERAM   (P36885), SK1_PERAU   (P85704), SK1_PERBR   (P85712), 
SK1_PERFU   (P85716), SK1_PERRU   (P85722), SK1_POLAY   (P85743), 
SK1_PRIVA   (P85749), SK1_PSEBJ   (P85753), SK1_PSEFO   (P85761), 
SK1_PSEFV   (P85757), SK1_PYCSU   (P85765), SK1_RHOPR   (P85810), 
SK1_RHYMA   (P04428), SK1_SHELA   (P85856), SK1_SYMPA   (P85786), 
SK1_THEPT   (P85792)
» more

False negative sequences
10 sequences

CAE12_LITCI (P62540), CAE12_LITRO (P86507), CAE12_LITSP (P62541), 
CAE21_LITCI (P82087), CAE22_LITCI (P82088), CAE31_LITCI (P82089), 
CAE32_LITCI (P82090), CAE41_LITCI (P82091), CAE42_LITCI (P82092), 
SK2_RHOPR   (P85811)
» more

'Partial' sequences
1 sequence

CAER2_XENLA (P05223)

False positive sequences
1 sequence

ATP23_COCIM (Q1E910)


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