Entry: PS00259

General information about the entry

Entry name [info] GASTRIN
Accession [info] PS00259
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); APR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00232

Name and characterization of the entry

Description [info] Gastrin / cholecystokinin family signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_06 which contains 548'586 sequence entries.

Total number of hits 133 in 113 different sequences
Number of true positive hits 132 in 112 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 10
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.25 %
Recall (true positives / (true positives + false negatives)) 92.96 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 4
Site [info] sulfatation at position 1
Version [info] 1

Cross-references [info]

True positive sequences
112 sequences

ANTR_CHICK  (P09859), ANTR_LITCT  (P80111), ANTR_TRASC  (P80110), 
CAE11_LITRO (P86506), CAER1_XENLA (P05222), CAER3_XENLA (P05224), 
CAER4_XENBO (P05226), CAER4_XENLA (P01357), CAER5_XENLA (P05225), 
CAER_LITPE  (P86486), CAER_LITXA  (P56264), CAER_PHAJA  (P86625), 
CCKN_BOVIN  (P41520), CCKN_CANFA  (Q9TS44), CCKN_CARAU  (O93464), 
CCKN_CHICK  (Q9PU41), CCKN_DASVI  (P68125), CCKN_HUMAN  (P06307), 
CCKN_LITCT  (P80344), CCKN_MACEU  (P68126), CCKN_MACFA  (P23362), 
CCKN_MACGI  (P0C229), CCKN_MOUSE  (P09240), CCKN_PAROL  (O57312), 
CCKN_PIG    (P01356), CCKN_RAT    (P01355), CCKN_STRCA  (Q9PU29), 
CCKN_TRASC  (P80345), CCK_PYTMO   (Q8JHB9), CCT1_VARVA  (E2E4E4), 
CION_CIOIN  (P16240), CSK_CALVO   (Q7M3V5), DSK_DROER   (B2ZB95), 
DSK_DROMA   (B2ZB96), DSK_DROME   (P09040), DSK_DROPS   (Q295C6), 
DSK_DROYA   (B2ZBA1), GAST_BOVIN  (P01352), GAST_CANFA  (P01353), 
GAST_CAPHI  (P04564), GAST_CAVPO  (P06885), GAST_CHICH  (P10034), 
GAST_DIDVI  (P33713), GAST_FELCA  (P01354), GAST_HORSE  (P55885), 
GAST_HUMAN  (P01350), GAST_MACGI  (P0C228), GAST_MACMU  (P33714), 
GAST_MOUSE  (P48757), GAST_PIG    (P01351), GAST_RAT    (P04563), 
GAST_SHEEP  (O02686), LOSK_LOCMI  (P47733), LSK2_PERAM  (P67803), 
LSK2_RHYMA  (P67802), NSK1_NEOBL  (P41492), NSK2_NEOBL  (P41493), 
SK1_APTFU   (P85534), SK1_ARCTE   (P85539), SK1_BANRO   (P85544), 
SK1_BLACR   (P85547), SK1_BLADU   (P85550), SK1_BLAGE   (P85555), 
SK1_BLAOR   (P85560), SK1_BLEDI   (P85566), SK1_CRYDW   (P85571), 
SK1_CRYKY   (P85576), SK1_DELRA   (B3EWM3), SK1_DERAT   (P85598), 
SK1_DERER   (P85586), SK1_DERIN   (P85592), SK1_DIPPU   (P85603), 
SK1_ELLSS   (P85852), SK1_ERGCA   (P85613), SK1_EUBDI   (P85619), 
SK1_EUBPO   (P85625), SK1_EUBSB   (P85631), SK1_EURFL   (P85847), 
SK1_GROGR   (P85640), SK1_GROPO   (P85642), SK1_GYNCS   (P85850), 
SK1_GYNLU   (P85652), SK1_LUCGR   (P85665), SK1_LUCSU   (P85671), 
SK1_LUCVE   (P85677), SK1_MASDA   (P85683), SK1_NEORO   (P85686), 
SK1_PANSB   (P85692), SK1_PANSS   (P85698), SK1_PANVI   (P85854), 
SK1_PERAM   (P36885), SK1_PERAU   (P85704), SK1_PERBR   (P85712), 
SK1_PERFU   (P85716), SK1_PERRU   (P85722), SK1_POLAY   (P85743), 
SK1_PRIVA   (P85749), SK1_PSEBJ   (P85753), SK1_PSEFO   (P85761), 
SK1_PSEFV   (P85757), SK1_PYCSU   (P85765), SK1_RHOPR   (P85810), 
SK1_RHYMA   (P04428), SK1_SHELA   (P85856), SK1_SYMPA   (P85786), 
SK1_THEPT   (P85792)
» More

False negative sequences
10 sequences

CAE12_LITCI (P62540), CAE12_LITRO (P86507), CAE12_LITSP (P62541), 
CAE21_LITCI (P82087), CAE22_LITCI (P82088), CAE31_LITCI (P82089), 
CAE32_LITCI (P82090), CAE41_LITCI (P82091), CAE42_LITCI (P82092), 
SK2_RHOPR   (P85811)
» More

'Partial' sequences
1 sequence

CAER2_XENLA (P05223)

False positive sequences
1 sequence

ATP23_COCIM (Q1E910)


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