Entry: PS00264

General information about the entry
Entry name NEUROHYPOPHYS_HORM
Accession number PS00264
Entry type PATTERN
Date APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00237
Name and characterization of the entry
DescriptionNeurohypophysial hormones signature.
Pattern C-[LIFY]-[LIFYV]-x-N-[CS]-P-x-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 52 hits in 52 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 52 hits in 52 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 8
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 3
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 86.67 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 1,disulfide
  • `Interesting' site in the pattern: 5,disulfide
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CONO_CONGE  (P05486), CONO_CONST  (P05487), CONO_LYMST  (Q00945), 
DNF1_LOCMI  (P16339), ISOT_CYPCA  (P42993), NEU1_BALPH  (P69056), 
NEU1_BOVIN  (P01175), NEU1_CATCO  (P15210), NEU1_HIPAM  (P69044), 
NEU1_HORSE  (P01176), NEU1_HUMAN  (P01178), NEU1_MOUSE  (P35454), 
NEU1_ONCKE  (Q91166), NEU1_ONCMA  (Q07663), NEU1_PIG    (P01177), 
NEU1_RABIT  (P69043), NEU1_RAT    (P01179), NEU1_SHEEP  (P13389), 
NEU1_TACAC  (P69057), NEU2_BALPH  (P01184), NEU2_BOVIN  (P01180), 
NEU2_CATCO  (P15211), NEU2_CAVPO  (P10769), NEU2_HUMAN  (P01185), 
NEU2_MOUSE  (P35455), NEU2_ONCKE  (Q91167), NEU2_PIG    (P01183), 
NEU2_RAT    (P01186), NEU2_SHEEP  (P01181), NEU3_CATCO  (P17668), 
NEU3_EPTST  (Q7M428), NEU3_ONCKE  (P16041), NEU3_ONCMA  (Q07662), 
NEU4_CATCO  (P16229), NEU4_ONCKE  (P16042), NEUI_TAKRU  (O42493), 
NEUM_BUFJA  (P08162), NEUV_AMIRE  (P42992), NEUV_BUFJA  (P08163), 
NEUV_CHICK  (P24787), NEUV_RANES  (P11858), NEUV_TAKRU  (O42499), 
OXYA_SCYCA  (P42996), OXYA_SQUAC  (P42999), OXYF_SCYCA  (P42997), 
OXYT_CYPCA  (P69128), OXYT_EISFO  (P42998), OXYT_HYDCO  (P69058), 
OXYT_OCTVU  (P80027), OXYT_PETMA  (P69129), OXYT_RAJCL  (P42994), 
OXYV_SQUAC  (P43000)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
CONOV_CONVL (P85141), CONO_CONTE  (P86255), CXPH_CONRA  (P58990), 
NEU1_ANSAN  (P35519), NEU1_STRCA  (P15444), NEU2_ANSAN  (P19630), 
NEU2_STRCA  (P21916), OXYT_AMIRE  (P42995)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
NEU1_PAPHA  (P32005), NEU2_HORSE  (P01182), NEU2_LOXAF  (P81768)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1NPO;

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