Entry: PS00266

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General information about the entry

Entry name [info] SOMATOTROPIN_1
Accession [info] PS00266
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00239

Name and characterization of the entry

Description [info] Somatotropin, prolactin and related hormones signature 1.
Pattern [info]
C-x-[STN]-x(2)-[LIVMFYS]-x-[LIVMSTA]-P-x(5)-[TALIV]-x(7)-[LIVMFY]-x(6)-
[LIVMFY]-x(2)-[STACV]-W.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 195 in 195 different sequences
Number of true positive hits 189 in 189 different sequences
Number of 'unknown' hits
Number of false positive hits 6 in 6 different sequences
Number of false negative sequences 25
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 96.92 %
Recall (true positives / (true positives + false negatives)) 88.32 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
189 sequences

CSH1_BOVIN  (P09611), CSH2_BOVIN  (P19159), CSH_HUMAN   (P01243), 
CSH_SHEEP   (P16038), PLRP1_BOVIN (P05402), PLRP2_BOVIN (P12401), 
PLRP3_BOVIN (P12402), PR2A1_MOUSE (Q9JHK0), PR2C2_MOUSE (P04095), 
PR2C3_MOUSE (P04768), PR3B1_MESAU (P14059), PR3B1_MOUSE (P09586), 
PR3B1_RAT   (P09321), PR3D1_MOUSE (P18121), PR3D1_RAT   (P21702), 
PR3D4_RAT   (P34207), PR4A1_MOUSE (O35256), PR4A1_RAT   (P09320), 
PR7B1_MOUSE (Q8CGZ9), PR7B1_RAT   (Q8CJ42), PR7C1_MOUSE (Q9CRB5), 
PR7D1_MOUSE (P04769), PRL1_ALLMI  (P55751), PRL1_CRONO  (P55753), 
PRL1_ONCKE  (P69130), PRL1_ONCTS  (P69131), PRL1_OREMO  (P09319), 
PRL2_ALLMI  (P55752), PRL2_CRONO  (P55754), PRL2_ONCKE  (P09584), 
PRL2_ONCTS  (Q91364), PRL2_OREMO  (P09318), PRL_AILME   (Q8HXS1), 
PRL_ANGAN   (P33096), PRL_ANGJA   (Q7ZZV3), PRL_BALBO   (P33089), 
PRL_BOVIN   (P01239), PRL_CAMDR   (P22393), PRL_CAPHI   (Q28318), 
PRL_CARAU   (P87495), PRL_CEREL   (Q6UC74), PRL_CHEMY   (P33090), 
PRL_CHICK   (P14676), PRL_CORAU   (P34181), PRL_CYPCA   (P09585), 
PRL_DICLA   (P48249), PRL_FELCA   (P46403), PRL_HORSE   (P12420), 
PRL_HUMAN   (P01236), PRL_HYPMO   (P35395), PRL_HYPNO   (P29235), 
PRL_ICTPU   (P51904), PRL_ISOMA   (Q3Y4G6), PRL_LOXAF   (P10765), 
PRL_MACMU   (P55151), PRL_MELGA   (P17572), PRL_MESAU   (P37884), 
PRL_MICMO   (Q9QZL1), PRL_MONDO   (O62819), PRL_NEOVI   (P29234), 
PRL_ONCMY   (P21993), PRL_PAROL   (Q9YGV6), PRL_PIG     (P01238), 
PRL_PROAT   (P33091), PRL_RABIT   (Q28632), PRL_RAT     (P01237), 
PRL_SALSA   (P48096), PRL_SHEEP   (P01240), PRL_SPAAU   (O93337), 
PRL_TRIVU   (O62781), SOM2_HUMAN  (P01242), SOM2_MACMU  (Q07370), 
SOM2_PANTR  (P58757), SOMA1_ACIGU (P26773), SOMA1_CARAU (O93359), 
SOMA1_ONCMY (P09538), SOMA1_ONCNE (Q91222), SOMA2_ACIGU (P26774), 
SOMA2_CARAU (O93360), SOMA2_ONCMY (P20332), SOMA2_ONCNE (Q91221), 
SOMA2_XENLA (P12856), SOMA_ACABU  (Q01282), SOMA_ACALA  (P45654), 
SOMA_AILME  (Q8HYE5), SOMA_ANAPL  (P11228), SOMA_ANGJA  (P08899), 
SOMA_BALBO  (P33092), SOMA_BALPH  (Q659Q8), SOMA_BOSGF  (Q1HFN3), 
SOMA_BOSMU  (Q864S7), SOMA_BOVIN  (P01246), SOMA_BUBBU  (O18938), 
SOMA_BUFMA  (O73849), SOMA_CALJA  (Q9GMB3), SOMA_CAMDR  (Q7YRR6), 
SOMA_CANFA  (P33711), SOMA_CAPHI  (P67931), SOMA_CAVPO  (Q9JKM4), 
SOMA_CEREL  (P56437), SOMA_CHEMY  (P34005), SOMA_CHICK  (P08998), 
SOMA_CORAU  (P45655), SOMA_CORLV  (O13188), SOMA_CRONO  (P55755), 
SOMA_CTEID  (P69158), SOMA_CYPCA  (P10298), SOMA_DELDE  (Q8MI73), 
SOMA_DICLA  (Q05163), SOMA_ESOLU  (P34744), SOMA_FELCA  (P46404), 
SOMA_GALSE  (Q9GKA1), SOMA_GIRCA  (Q7YQD2), SOMA_HETFO  (Q9W6R8), 
SOMA_HIPAM  (Q7YQB8), SOMA_HORSE  (P01245), SOMA_HUMAN  (P01241), 
SOMA_HYPMO  (P69159), SOMA_HYPNO  (P69160), SOMA_ICTPU  (P34745), 
SOMA_KATPE  (P20391), SOMA_LABRO  (Q9W6J7), SOMA_LARCR  (Q9I9M4), 
SOMA_LATCA  (Q01283), SOMA_LEPOS  (P79885), SOMA_LITCT  (P10813), 
SOMA_LOXAF  (P20392), SOMA_MACMU  (P33093), SOMA_MELGA  (P22077), 
SOMA_MESAU  (P37886), SOMA_MISMI  (Q9W6J5), SOMA_MONDO  (Q9GL60), 
SOMA_MORSA  (P48248), SOMA_MOUSE  (P06880), SOMA_NEOVI  (P19795), 
SOMA_NYCPY  (Q9GMB2), SOMA_ODOAR  (Q9I9L5), SOMA_ONCKE  (P07064), 
SOMA_ONCKI  (P10607), SOMA_ONCMA  (Q9DGG5), SOMA_ONCTS  (Q07221), 
SOMA_OREMO  (P34746), SOMA_ORENI  (P13391), SOMA_PAGMA  (P08591), 
SOMA_PANGG  (P69162), SOMA_PANPG  (P69161), SOMA_PANTR  (P58756), 
SOMA_PAROL  (P09537), SOMA_PERFV  (Q9DEV3), SOMA_PIG    (P01248), 
SOMA_PRIGL  (P34006), SOMA_PROAN  (O73848), SOMA_PSEDN  (P24363), 
SOMA_RABIT  (P46407), SOMA_RAT    (P01244), SOMA_SAIBB  (P58343), 
SOMA_SALSA  (P10814), SOMA_SCIOC  (Q9IB11), SOMA_SEBSC  (P87391), 
SOMA_SERQU  (P09539), SOMA_SHEEP  (P67930), SOMA_SIGGU  (Q9IBE5), 
SOMA_SOLSE  (P45643), SOMA_SPAAU  (P29971), SOMA_SPAEH  (O70615), 
SOMA_STRCA  (Q9PWG3), SOMA_TAKRU  (O12980), SOMA_THUAL  (P34747), 
SOMA_THUTH  (P09113), SOMA_TRITC  (Q98UF6), SOMA_TRIVU  (O62754), 
SOMA_VERVA  (O93566), SOMA_VICPA  (P37885), SOMA_VULVU  (P10766), 
SOML1_SPAAU (P54863), SOML2_SPAAU (P79894), SOML_ACITR  (O93262), 
SOML_CYCLU  (P45640), SOML_GADMO  (P21919), SOML_HIPHI  (P45641), 
SOML_ICTPU  (Q9I8J9), SOML_ONCKE  (P24405), SOML_ORYLA  (Q6E211), 
SOML_PAROL  (P20362), SOML_PROAN  (O73847), SOML_SCIOC  (Q9YGK7), 
SOML_SIGGU  (Q9PWG4), SOML_SOLSE  (P45642), SOML_TETMU  (Q9I9H4)
» More

UniProtKB/Swiss-Prot
False negative sequences
25 sequences

CSHL_HUMAN  (Q14406), PLRP4_BOVIN (P18917), PR2A1_RAT   (Q9JII3), 
PR2B1_MOUSE (Q9DAZ2), PR2B1_RAT   (Q9JKL9), PR3C1_MOUSE (Q9QUN5), 
PR3C1_RAT   (Q9QUL0), PR5A1_MOUSE (Q9JII2), PR5A1_RAT   (Q9JII4), 
PR6A1_MOUSE (O35257), PR6A1_RAT   (P24800), PR7A1_MOUSE (O54830), 
PR7A2_MOUSE (O54831), PR7A2_RAT   (Q9R006), PR8A4_RAT   (P33580), 
PR8A5_RAT   (P33579), PR8A6_MOUSE (Q9DAY2), PR8A7_RAT   (P33578), 
PR8A8_MOUSE (Q9DAS4), PR8A9_MOUSE (Q9CQ58), PR8A9_RAT   (Q920I0), 
PRL_MOUSE   (P06879), SOMA1_XENLA (P12855), SOML_ANGAN  (Q90216), 
SOML_CARAU  (P79697)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

GHR4_RAT    (P33581), PRL_BUFJA   (P43001)

		
UniProtKB/Swiss-Prot
False positive sequences
6 sequences

GD_HHV11    (Q69091), GD_HHV1A    (P36318), GD_HHV1F    (Q05059), 
GD_HHV1H    (P06476), GD_HHV1K    (A1Z0Q5), GD_HHV1P    (P57083)
» More

PDB
[Detailed view]
22 PDB

1A22; 1AXI; 1BP3; 1F6F; 1HGU; 1HUW; 1HWG; 1HWH; 1KF9; 1RW5; 2Q98; 3D48; 3EW3; 3HHR; 3MZG; 3N06; 3N0P; 3NCB; 3NCC; 3NCE; 3NCF; 3NPZ
» More

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