Entry: PS00266

General information about the entry

Entry name [info] SOMATOTROPIN_1
Accession [info] PS00266
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00239

Name and characterization of the entry

Description [info] Somatotropin, prolactin and related hormones signature 1.
Pattern [info]
C-x-[STN]-x(2)-[LIVMFYS]-x-[LIVMSTA]-P-x(5)-[TALIV]-x(7)-[LIVMFY]-x(6)-
[LIVMFY]-x(2)-[STACV]-W.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 196 in 196 different sequences
Number of true positive hits 190 in 190 different sequences
Number of 'unknown' hits 0
Number of false positive hits 6 in 6 different sequences
Number of false negative sequences 25
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 96.94 %
Recall (true positives / (true positives + false negatives)) 88.37 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
190 sequences

CSH1_BOVIN  (P09611), CSH1_HUMAN  (P0DML2), CSH2_BOVIN  (P19159), 
CSH2_HUMAN  (P0DML3), CSH_SHEEP   (P16038), PLRP1_BOVIN (P05402), 
PLRP2_BOVIN (P12401), PLRP3_BOVIN (P12402), PR2A1_MOUSE (Q9JHK0), 
PR2C2_MOUSE (P04095), PR2C3_MOUSE (P04768), PR3B1_MESAU (P14059), 
PR3B1_MOUSE (P09586), PR3B1_RAT   (P09321), PR3D1_MOUSE (P18121), 
PR3D1_RAT   (P21702), PR3D4_RAT   (P34207), PR4A1_MOUSE (O35256), 
PR4A1_RAT   (P09320), PR7B1_MOUSE (Q8CGZ9), PR7B1_RAT   (Q8CJ42), 
PR7C1_MOUSE (Q9CRB5), PR7D1_MOUSE (P04769), PRL1_ALLMI  (P55751), 
PRL1_CRONO  (P55753), PRL1_ONCKE  (P69130), PRL1_ONCTS  (P69131), 
PRL1_OREMO  (P09319), PRL2_ALLMI  (P55752), PRL2_CRONO  (P55754), 
PRL2_ONCKE  (P09584), PRL2_ONCTS  (Q91364), PRL2_OREMO  (P09318), 
PRL_AILME   (Q8HXS1), PRL_ANGAN   (P33096), PRL_ANGJA   (Q7ZZV3), 
PRL_BALBO   (P33089), PRL_BOVIN   (P01239), PRL_CAMDR   (P22393), 
PRL_CAPHI   (Q28318), PRL_CARAU   (P87495), PRL_CEREL   (Q6UC74), 
PRL_CHEMY   (P33090), PRL_CHICK   (P14676), PRL_CORAU   (P34181), 
PRL_CYPCA   (P09585), PRL_DICLA   (P48249), PRL_FELCA   (P46403), 
PRL_HORSE   (P12420), PRL_HUMAN   (P01236), PRL_HYPMO   (P35395), 
PRL_HYPNO   (P29235), PRL_ICTPU   (P51904), PRL_ISOMA   (Q3Y4G6), 
PRL_LOXAF   (P10765), PRL_MACMU   (P55151), PRL_MELGA   (P17572), 
PRL_MESAU   (P37884), PRL_MICMO   (Q9QZL1), PRL_MONDO   (O62819), 
PRL_NEOVI   (P29234), PRL_ONCMY   (P21993), PRL_PAROL   (Q9YGV6), 
PRL_PIG     (P01238), PRL_PROAT   (P33091), PRL_RABIT   (Q28632), 
PRL_RAT     (P01237), PRL_SALSA   (P48096), PRL_SHEEP   (P01240), 
PRL_SPAAU   (O93337), PRL_TRIVU   (O62781), SOM2_HUMAN  (P01242), 
SOM2_MACMU  (Q07370), SOM2_PANTR  (P58757), SOMA1_ACIGU (P26773), 
SOMA1_CARAU (O93359), SOMA1_ONCMY (P09538), SOMA1_ONCNE (Q91222), 
SOMA2_ACIGU (P26774), SOMA2_CARAU (O93360), SOMA2_ONCMY (P20332), 
SOMA2_ONCNE (Q91221), SOMA2_XENLA (P12856), SOMA_ACABU  (Q01282), 
SOMA_ACALA  (P45654), SOMA_AILME  (Q8HYE5), SOMA_ANAPL  (P11228), 
SOMA_ANGJA  (P08899), SOMA_BALBO  (P33092), SOMA_BALPH  (Q659Q8), 
SOMA_BOSGF  (Q1HFN3), SOMA_BOSMU  (Q864S7), SOMA_BOVIN  (P01246), 
SOMA_BUBBU  (O18938), SOMA_CALJA  (Q9GMB3), SOMA_CAMDR  (Q7YRR6), 
SOMA_CANFA  (P33711), SOMA_CAPHI  (P67931), SOMA_CAVPO  (Q9JKM4), 
SOMA_CEREL  (P56437), SOMA_CHEMY  (P34005), SOMA_CHICK  (P08998), 
SOMA_CORAU  (P45655), SOMA_CORLV  (O13188), SOMA_CRONO  (P55755), 
SOMA_CTEID  (P69158), SOMA_CYPCA  (P10298), SOMA_DELDE  (Q8MI73), 
SOMA_DICLA  (Q05163), SOMA_ESOLU  (P34744), SOMA_FELCA  (P46404), 
SOMA_GALSE  (Q9GKA1), SOMA_GIRCA  (Q7YQD2), SOMA_HETFO  (Q9W6R8), 
SOMA_HIPAM  (Q7YQB8), SOMA_HORSE  (P01245), SOMA_HUMAN  (P01241), 
SOMA_HYPMO  (P69159), SOMA_HYPNO  (P69160), SOMA_ICTPU  (P34745), 
SOMA_KATPE  (P20391), SOMA_LABRO  (Q9W6J7), SOMA_LARCR  (Q9I9M4), 
SOMA_LATCA  (Q01283), SOMA_LEPOS  (P79885), SOMA_LITCT  (P10813), 
SOMA_LOXAF  (P20392), SOMA_MACMU  (P33093), SOMA_MELGA  (P22077), 
SOMA_MESAU  (P37886), SOMA_MISMI  (Q9W6J5), SOMA_MONDO  (Q9GL60), 
SOMA_MORSA  (P48248), SOMA_MOUSE  (P06880), SOMA_NEOVI  (P19795), 
SOMA_NYCPY  (Q9GMB2), SOMA_ODOAR  (Q9I9L5), SOMA_ONCKE  (P07064), 
SOMA_ONCKI  (P10607), SOMA_ONCMA  (Q9DGG5), SOMA_ONCTS  (Q07221), 
SOMA_OREMO  (P34746), SOMA_ORENI  (P13391), SOMA_PAGMA  (P08591), 
SOMA_PANGG  (P69162), SOMA_PANPG  (P69161), SOMA_PANTR  (P58756), 
SOMA_PAROL  (P09537), SOMA_PERFV  (Q9DEV3), SOMA_PIG    (P01248), 
SOMA_PRIGL  (P34006), SOMA_PROAN  (O73848), SOMA_PSEDN  (P24363), 
SOMA_RABIT  (P46407), SOMA_RAT    (P01244), SOMA_RHIMB  (O73849), 
SOMA_SAIBB  (P58343), SOMA_SALSA  (P10814), SOMA_SCIOC  (Q9IB11), 
SOMA_SEBSC  (P87391), SOMA_SERQU  (P09539), SOMA_SHEEP  (P67930), 
SOMA_SIGGU  (Q9IBE5), SOMA_SOLSE  (P45643), SOMA_SPAAU  (P29971), 
SOMA_SPAEH  (O70615), SOMA_STRCA  (Q9PWG3), SOMA_TAKRU  (O12980), 
SOMA_THUAL  (P34747), SOMA_THUTH  (P09113), SOMA_TRITC  (Q98UF6), 
SOMA_TRIVU  (O62754), SOMA_VERVA  (O93566), SOMA_VICPA  (P37885), 
SOMA_VULVU  (P10766), SOML1_SPAAU (P54863), SOML2_SPAAU (P79894), 
SOML_ACITR  (O93262), SOML_CYCLU  (P45640), SOML_GADMO  (P21919), 
SOML_HIPHI  (P45641), SOML_ICTPU  (Q9I8J9), SOML_ONCKE  (P24405), 
SOML_ORYLA  (Q6E211), SOML_PAROL  (P20362), SOML_PROAN  (O73847), 
SOML_SCIOC  (Q9YGK7), SOML_SIGGU  (Q9PWG4), SOML_SOLSE  (P45642), 
SOML_TETMU  (Q9I9H4)
» More

UniProtKB/Swiss-Prot
False negative sequences
25 sequences

CSHL_HUMAN  (Q14406), PLRP4_BOVIN (P18917), PR2A1_RAT   (Q9JII3), 
PR2B1_MOUSE (Q9DAZ2), PR2B1_RAT   (Q9JKL9), PR3C1_MOUSE (Q9QUN5), 
PR3C1_RAT   (Q9QUL0), PR5A1_MOUSE (Q9JII2), PR5A1_RAT   (Q9JII4), 
PR6A1_MOUSE (O35257), PR6A1_RAT   (P24800), PR7A1_MOUSE (O54830), 
PR7A2_MOUSE (O54831), PR7A2_RAT   (Q9R006), PR8A4_RAT   (P33580), 
PR8A5_RAT   (P33579), PR8A6_MOUSE (Q9DAY2), PR8A7_RAT   (P33578), 
PR8A8_MOUSE (Q9DAS4), PR8A9_MOUSE (Q9CQ58), PR8A9_RAT   (Q920I0), 
PRL_MOUSE   (P06879), SOMA1_XENLA (P12855), SOML_ANGAN  (Q90216), 
SOML_CARAU  (P79697)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

GHR4_RAT    (P33581), PRL_BUFJA   (P43001)

		
UniProtKB/Swiss-Prot
False positive sequences
6 sequences

GD_HHV11    (Q69091), GD_HHV1A    (P36318), GD_HHV1F    (Q05059), 
GD_HHV1H    (P06476), GD_HHV1K    (A1Z0Q5), GD_HHV1P    (P57083)
» More

PDB
[Detailed view]
22 PDB

1A22; 1AXI; 1BP3; 1F6F; 1HGU; 1HUW; 1HWG; 1HWH; 1KF9; 1RW5; 2Q98; 3D48; 3EW3; 3HHR; 3MZG; 3N06; 3N0P; 3NCB; 3NCC; 3NCE; 3NCF; 3NPZ
» More

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