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Entry: PS00267

General information about the entry

Entry name [info] TACHYKININ
Accession [info] PS00267
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-1990 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00240

Name and characterization of the entry

Description [info] Tachykinin family signature.
Pattern [info]
F-[IVFY]-G-[LM]-M-[G>].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 95 in 88 different sequences
Number of true positive hits 66 in 59 different sequences
Number of 'unknown' hits 0
Number of false positive hits 29 in 29 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 69.47 %
Recall (true positives / (true positives + false negatives)) 98.51 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
59 sequences

TKN1_BOVIN  (P01289    ), TKN1_CARAU  (P25421    ), TKN1_HUMAN  (P20366    ), 
TKN1_KASMA  (P08613    ), TKN1_MESAU  (Q60541    ), TKN1_MOUSE  (P41539    ), 
TKN1_OCTVU  (Q8I6S3    ), TKN1_PSEGU  (P42986    ), TKN1_RABIT  (P41540    ), 
TKN1_RAT    (P06767    ), TKN1_SCYCA  (P08608    ), TKN1_THEKW  (M9P2C1    ), 
TKN1_TORMA  (Q7LZ48    ), TKN1_UPEIN  (P82026    ), TKN1_UPERU  (P08612    ), 
TKN2_KASMA  (P08614    ), TKN2_OCTVU  (Q8I6S2    ), TKN2_PSEGU  (P42987    ), 
TKN2_SCYCA  (P08609    ), TKN2_UPERU  (P08616    ), TKN3_PSEGU  (P42988    ), 
TKN4_HUMAN  (Q86UU9    ), TKN4_MOUSE  (Q99N14    ), TKN4_PSEGU  (P42989    ), 
TKN4_RABIT  (Q6ECK6    ), TKN4_RAT    (Q8CH01    ), TKN5_PSEGU  (P42990    ), 
TKNA_CAVPO  (P67932    ), TKNA_CHICK  (P19850    ), TKNA_GADMO  (P28498    ), 
TKNA_HORSE  (P67933    ), TKNA_LITCT  (P22688    ), TKNA_ONCMY  (P28499    ), 
TKNA_PELRI  (P29207    ), TKNA_SCYCA  (P41333    ), TKNB_CHICK  (P19851    ), 
TKNB_GADMO  (P69144    ), TKNB_LITCT  (P22689    ), TKNB_ONCMY  (P69143    ), 
TKNB_PELRI  (P29135    ), TKNC_LITCT  (P22690    ), TKNG_ONCMY  (Q9PRZ3    ), 
TKNK_BOVIN  (P08858    ), TKNK_HUMAN  (Q9UHF0    ), TKNK_MOUSE  (P55099    ), 
TKNK_PELRI  (P67935    ), TKNK_PIG    (P67934    ), TKNK_RAT    (P08435    ), 
TKNM_ODOMA  (P40951    ), TKN_ELECI   (P62933    ), TKN_ELEMO   (P62934    ), 
TKN_KASSE   (P08611    ), TKN_PHYBI   (P08610    ), TKN_PHYFU   (P08615    ), 
TKSIA_AEDAE (P42634    ), TLP10_PHONI (P86307    ), TLP11_PHONI (P86308    ), 
TLP13_PHONI (P86310    ), TLP9_PHONI  (P86306    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

TKND_LITCT  (P22691    )

		
UniProtKB/Swiss-Prot
False positive sequences
29 sequences

ADEP_ECOLI  (P31466    ), AROK_BURL3  (Q39KC5    ), AROK_BURMA  (Q62GA9    ), 
AROK_BURP1  (Q3JMW0    ), AROK_BURPS  (Q63Q56    ), AROK_BURTA  (Q2SU71    ), 
AROK_CUPNJ  (Q46WJ3    ), AROK_RALSO  (Q8XV61    ), AROK_RHILO  (Q98FY0    ), 
AROK_RHIME  (Q92ME6    ), COX1_BACSU  (P24010    ), ERS1_ARATH  (Q38846    ), 
FUS_BRSVA   (P29791    ), FUS_BRSVC   (P22167    ), FUS_BRSVR   (P23728    ), 
GLXK_BACSU  (P42100    ), HMA9_ORYSJ  (A0A0P0X004), KR74_ICHVA  (Q00095    ), 
LAX1_ARATH  (Q9LFB2    ), LAX1_MEDTR  (Q9FEL8    ), LAX2_ORYSJ  (Q688J2    ), 
LAX3_ARATH  (Q9CA25    ), LAX3_MEDTR  (Q9FEL6    ), LAX4_ORYSJ  (Q53JG7    ), 
NASA_BACSU  (P42432    ), PDR1_TOBAC  (Q76CU2    ), Y2524_CUPNH (P31640    ), 
Y2585_DEIRA (Q9RRA9    ), YAT1_RHOBL  (P05443    )
» more

PDB
[Detailed view]
13 PDB

1MXQ; 1MYU; 1N6T; 1P9F; 2B19; 2GFR; 2KS9; 2KSA; 2KSB; 2MCE; 2MOC; 2NOU; 4HOM
» more

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