Entry: PS00277

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General information about the entry

Entry name [info] STAPH_STREP_TOXIN_1
Accession [info] PS00277
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00250

Name and characterization of the entry

Description [info] Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin signature 1.
Pattern [info]
Y-G-G-[LIV]-T-{I}-{N}-x(2)-N.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 20 in 20 different sequences
Number of true positive hits 16 in 16 different sequences
Number of 'unknown' hits
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 80.00 %
Recall (true positives / (true positives + false negatives)) 59.26 %

Comments [info]

Taxonomic range [info] Bacteriophages, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
16 sequences

ENTC1_STAAU (P01553), ENTC2_STAAU (P34071), ENTC3_STAAM (P0A0L3), 
ENTC3_STAAN (P0A0L4), ENTC3_STAAU (P0A0L5), ETXA_STAAU  (P0A0L2), 
ETXA_STAAW  (P0A0L1), ETXB_STAAU  (P01552), ETXD_STAAU  (P20723), 
ETXE_STAAU  (P12993), SPEA_BPT12  (P0DJY8), SPEA_STRP8  (P62561), 
SPEA_STRPY  (P0DJY7), SPEC_STRP1  (P0C0I5), SPEC_STRP6  (Q5XB82), 
SPEC_STRP8  (Q8NKX2)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

ETXG_STAAM  (P0A0L6), ETXG_STAAN  (P0A0L7), ETXG_STAAU  (P0A0L8), 
ETXH_STAAU  (P0A0M0), ETXH_STAAW  (P0A0L9), SPEG_STRP1  (Q9X5C7), 
SPEG_STRP3  (P0DG08), SPEG_STRPQ  (P0DG09), SPEH_STRP1  (P0C0I7), 
SPEH_STRPY  (P0C0I6), TSST_STAAU  (P06886)
» More

UniProtKB/Swiss-Prot
False positive sequences
4 sequences

AMPA_CORDI  (Q6NG90), AMPA_COREF  (Q8FNP8), AMPA_MYCLE  (O32956), 
GPI18_ASHGO (Q757K7)
» More

PDB
[Detailed view]
58 PDB

1AN8; 1B1Z; 1CQV; 1D5M; 1D5X; 1D5Z; 1D6E; 1DYQ; 1ESF; 1FNU; 1FNV; 1FNW; 1GOZ; 1HA5; 1HQR; 1I4G; 1I4H; 1I4P; 1I4Q; 1I4R; 1I4X; 1JCK; 1JWM; 1JWS; 1JWU; 1KLG; 1KLU; 1KTK; 1L0X; 1L0Y; 1LO5; 1PYW; 1SBB; 1SE2; 1SE3; 1SE4; 1SJE; 1SJH; 1STE; 1SXT; 1T5X; 1UNS; 1UUP; 2AQ1; 2AQ2; 2AQ3; 2IPK; 2SEB; 3BVG; 3BVM; 3BVZ; 3BYT; 3BYY; 3BZD; 3GP7; 3R8B; 3SEB; 3W2D
» More

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