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Entry: PS00277

General information about the entry

Entry name [info] STAPH_STREP_TOXIN_1
Accession [info] PS00277
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-2006 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00250

Name and characterization of the entry

Description [info] Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin signature 1.
Pattern [info]
Y-G-G-[LIV]-T-{I}-{N}-x(2)-N.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 20 in 20 different sequences
Number of true positive hits 16 in 16 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 80.00 %
Recall (true positives / (true positives + false negatives)) 59.26 %

Comments [info]

Taxonomic range [info] Bacteriophages, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
16 sequences

ENTC1_STAAU (P01553    ), ENTC2_STAAU (P34071    ), ENTC3_STAAM (P0A0L3    ), 
ENTC3_STAAN (P0A0L4    ), ENTC3_STAAU (P0A0L5    ), ETXA_STAAU  (P0A0L2    ), 
ETXA_STAAW  (P0A0L1    ), ETXB_STAAU  (P01552    ), ETXD_STAAU  (P20723    ), 
ETXE_STAAU  (P12993    ), SPEA_BPT12  (P0DJY8    ), SPEA_STRP8  (P62561    ), 
SPEA_STRPY  (P0DJY7    ), SPEC_STRP1  (P0C0I5    ), SPEC_STRP6  (Q5XB82    ), 
SPEC_STRP8  (Q8NKX2    )
» more

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

ETXG_STAAM  (P0A0L6    ), ETXG_STAAN  (P0A0L7    ), ETXG_STAAU  (P0A0L8    ), 
ETXH_STAAU  (P0A0M0    ), ETXH_STAAW  (P0A0L9    ), SPEG_STRP1  (Q9X5C7    ), 
SPEG_STRP3  (P0DG08    ), SPEG_STRPQ  (P0DG09    ), SPEH_STRP1  (P0C0I7    ), 
SPEH_STRPY  (P0C0I6    ), TSST_STAAU  (P06886    )
» more

UniProtKB/Swiss-Prot
False positive sequences
4 sequences

AMPA_CORDI  (Q6NG90    ), AMPA_COREF  (Q8FNP8    ), AMPA_MYCLE  (O32956    ), 
GPI18_ASHGO (Q757K7    )
» more

PDB
[Detailed view]
65 PDB

1AN8; 1B1Z; 1CQV; 1D5M; 1D5X; 1D5Z; 1D6E; 1DYQ; 1ESF; 1FNU; 1FNV; 1FNW; 1GOZ; 1HA5; 1HQR; 1I4G; 1I4H; 1I4P; 1I4Q; 1I4R; 1I4X; 1JCK; 1JWM; 1JWS; 1JWU; 1KLG; 1KLU; 1KTK; 1L0X; 1L0Y; 1LO5; 1PYW; 1SBB; 1SE2; 1SE3; 1SE4; 1SJE; 1SJH; 1STE; 1SXT; 1T5X; 1UNS; 1UUP; 2AQ1; 2AQ2; 2AQ3; 2IPK; 2SEB; 3BVG; 3BVM; 3BVZ; 3BYT; 3BYY; 3BZD; 3GP7; 3R8B; 3SEB; 3W2D; 4C56; 4RGM; 4RGN; 4RGO; 4UDU; 5FK9; 5FKA
» more

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