Entry: PS00279

General information about the entry

Entry name [info] MACPF_1
Accession [info] PS00279
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00251

Name and characterization of the entry

Description [info] Membrane attack complex/perforin (MACPF) domain signature.
Pattern [info]
Y-x(6)-[FY]-G-T-H-[FY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 29 in 29 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 25
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 53.70 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
29 sequences

CO6_BOVIN   (Q29RU4), CO6_HUMAN   (P13671), CO6_PANTR   (P61134), 
CO6_PONPY   (P61135), CO6_RAT     (Q811M5), CO7_BOVIN   (Q29RQ1), 
CO7_HUMAN   (P10643), CO7_PIG     (Q9TUQ3), CO7_PONAB   (Q5RAD0), 
CO8A_HUMAN  (P07357), CO8A_MOUSE  (Q8K182), CO8A_RABIT  (P98136), 
CO8B_HUMAN  (P07358), CO8B_MOUSE  (Q8BH35), CO8B_ONCMY  (Q90X85), 
CO8B_PAROL  (Q9PVW7), CO8B_RAT    (P55314), CO9_BOVIN   (Q3MHN2), 
CO9_HORSE   (P48770), CO9_HUMAN   (P02748), CO9_MOUSE   (P06683), 
CO9_ONCMY   (P06682), CO9_RABIT   (P48747), CO9_RAT     (Q62930), 
CO9_TAKRU   (P79755), PERF_HUMAN  (P14222), PERF_MOUSE  (P10820), 
PERF_RAT    (P35763), PV21_POMCA  (P0C8G6)
» More

UniProtKB/Swiss-Prot
False negative sequences
25 sequences

BRNP1_BOVIN (Q5E9L2), BRNP1_CHICK (Q7ZZR3), BRNP1_HUMAN (O60477), 
BRNP1_MOUSE (Q920P3), BRNP1_RAT   (Q925T8), BRNP2_HUMAN (Q9C0B6), 
BRNP2_MOUSE (Q6DFY8), BRNP2_PONAB (Q5RDR5), BRNP2_RAT   (Q8K1M8), 
BRNP3_HUMAN (Q76B58), BRNP3_MOUSE (Q499E0), BRNP3_RAT   (Q8K1M7), 
CAD1_ARATH  (Q9C7N2), CO8B_RABIT  (P98137), MACP1_ARATH (Q8L612), 
MACP2_ARATH (Q9STW5), MPEG1_BOVIN (Q2KJC3), MPEG1_HUMAN (Q2M385), 
MPEG1_MOUSE (A1L314), MPEG1_PONAB (Q5RBP9), MPEG1_RAT   (Q9WV57), 
NSL1_ARATH  (Q9SGN6), TX60A_ACTVL (Q76DT2), TX60A_PHYSE (P58911), 
TX60B_PHYSE (P58912)
» More

PDB
[Detailed view]
7 PDB

2QQH; 2RD7; 3NSJ; 3OJY; 3T5O; 4A5W; 4E0S

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