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Entry: PS00292

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General information about the entry

Entry name [info] CYCLINS
Accession [info] PS00292
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); NOV-1995 (DATA UPDATE); DEC-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00264

Name and characterization of the entry

Description [info] Cyclins signature.
Pattern [info]
R-x(2)-[LIVMSA]-x(2)-[FYWS]-[LIVM]-x(8)-[LIVMFC]-x(4)-[LIVMFYA]-x(2)-
[STAGC]-[LIVMFYQ]-x-[LIVMFYC]-[LIVMFY]-D-[RKH]-[LIVMFYW].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_01 which contains 547'357 sequence entries.


Total number of hits 178 in 178 different sequences
Number of true positive hits 178 in 178 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 161
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 52.51 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
178 sequences

CCA11_ARATH (Q9C6Y3), CCA11_ORYSJ (Q7F830), CCA12_ARATH (Q9FVX0), 
CCA12_ORYSJ (Q0JPA4), CCA13_ORYSJ (Q0INT0), CCA14_ORYSJ (Q0DJR9), 
CCA21_ARATH (Q39071), CCA21_ORYSJ (Q2QQ96), CCA22_ARATH (Q147G5), 
CCA31_ARATH (Q9FMH5), CCA31_ORYSJ (Q75I54), CCA32_ORYSJ (Q2QN26), 
CCA33_ARATH (A0MEB5), CCA34_ARATH (Q3ECW2), CCB11_ARATH (P30183), 
CCB11_ORYSJ (Q0JIF2), CCB12_ARATH (Q39067), CCB13_ARATH (Q39069), 
CCB14_ARATH (O48790), CCB15_ARATH (Q39072), CCB15_ORYSJ (Q0DH40), 
CCB21_ARATH (Q39068), CCB21_ORYSI (Q01J96), CCB21_ORYSJ (Q7XSJ6), 
CCB22_ARATH (Q39070), CCB22_ORYSI (A2YH60), CCB22_ORYSJ (Q0D9C7), 
CCB23_ARATH (Q9LDM4), CCB24_ARATH (Q9SFW6), CCB31_ARATH (Q9SA32), 
CCD11_ARATH (P42751), CCD12_ORYSJ (Q8H339), CCD21_ARATH (P42752), 
CCD21_ORYSJ (Q0J233), CCD22_ORYSJ (Q8LHA8), CCD23_ORYSJ (Q10K98), 
CCD31_ARATH (P42753), CCD31_ORYSJ (Q69QB8), CCD32_ARATH (Q9FGQ7), 
CCD33_ARATH (Q9SN11), CCD41_ARATH (Q8LGA1), CCD41_ORYSJ (Q6YXH8), 
CCD42_ARATH (Q0WQN9), CCD42_ORYSJ (Q4KYM5), CCD52_ORYSJ (Q2QMW1), 
CCF21_ORYSJ (Q6K1Z6), CCF22_ORYSJ (Q6K8S0), CCF31_ORYSJ (Q10Q63), 
CCF32_ORYSJ (Q10Q62), CCN1_ANTMA  (P34800), CCN2_ANTMA  (P34801), 
CCNA1_CARAU (Q92161), CCNA1_HUMAN (P78396), CCNA1_MOUSE (Q61456), 
CCNA1_RAT   (Q6AY13), CCNA1_XENLA (P18606), CCNA2_BOVIN (P30274), 
CCNA2_CHICK (P43449), CCNA2_HUMAN (P20248), CCNA2_MESAU (P37881), 
CCNA2_MOUSE (P51943), CCNA2_XENLA (P47827), CCNAL_DAUCA (P25010), 
CCNA_DROME  (P14785), CCNA_HYDVD  (P51986), CCNA_PATVU  (P24861), 
CCNA_SPISO  (P04962), CCNB1_ANGJA (Q60FY0), CCNB1_BOVIN (Q1LZG6), 
CCNB1_CAEEL (Q10653), CCNB1_CARAU (Q92162), CCNB1_CRIGR (Q08301), 
CCNB1_HUMAN (P14635), CCNB1_MEDSV (P46277), CCNB1_MESAU (P37882), 
CCNB1_MOUSE (P24860), CCNB1_ORYCU (Q9DGA4), CCNB1_ORYJA (Q9DGA0), 
CCNB1_ORYLA (Q9IBG1), CCNB1_ORYLU (Q9DG97), CCNB1_RAT   (P30277), 
CCNB1_SOYBN (P25011), CCNB1_XENLA (P13350), CCNB2_ANGJA (Q60FX9), 
CCNB2_BOVIN (O77689), CCNB2_CHICK (P29332), CCNB2_HUMAN (O95067), 
CCNB2_MACFA (Q4R7A8), CCNB2_MEDSA (P30278), CCNB2_MEDSV (P46278), 
CCNB2_MESAU (P37883), CCNB2_MOUSE (P30276), CCNB2_ORYJA (Q9DG99), 
CCNB2_ORYLA (Q9IBG0), CCNB2_ORYLU (Q9DG96), CCNB2_RANJA (O93229), 
CCNB2_SOYBN (P25012), CCNB2_XENLA (P13351), CCNB3_CANFA (Q659K0), 
CCNB3_CHICK (P39963), CCNB_ARBPU  (P07818), CCNB_DICDI  (P42524), 
CCNB_DROME  (P20439), CCNB_HYDVD  (P51987), CCNB_HYDVU  (P51988), 
CCNB_MARGL  (P15206), CCNB_PATPE  (P18063), CCNB_PATVU  (P24862), 
CCNB_SPISO  (P13952), CCND1_BOVIN (Q2KI22), CCND1_CHICK (P55169), 
CCND1_DANRE (Q90459), CCND1_HUMAN (P24385), CCND1_MOUSE (P25322), 
CCND1_PONAB (Q5R6J5), CCND1_RAT   (P39948), CCND1_XENLA (P50755), 
CCND2_BOVIN (Q0P5D3), CCND2_CHICK (P49706), CCND2_HUMAN (P30279), 
CCND2_MOUSE (P30280), CCND2_PIG   (Q8WNW2), CCND2_RAT   (Q04827), 
CCND2_XENLA (P53782), CCND3_BOVIN (Q3MHH5), CCND3_HUMAN (P30281), 
CCND3_MOUSE (P30282), CCND3_RAT   (P48961), CCNE1_CHICK (P49707), 
CCNE1_DANRE (P47794), CCNE1_HUMAN (P24864), CCNE1_MOUSE (Q61457), 
CCNE1_RAT   (P39949), CCNE1_XENLA (P50756), CCNE2_BOVIN (Q5E9K7), 
CCNE2_HUMAN (O96020), CCNE2_MOUSE (Q9Z238), CCNE2_XENLA (Q91780), 
CCNE3_XENLA (O42575), CCNE_CAEEL  (O01501), CCNE_DROME  (P54733), 
CCNF_BOVIN  (A5PK16), CCNF_DANRE  (Q6NYX6), CCNF_HUMAN  (P41002), 
CCNF_MOUSE  (P51944), CCNF_RAT    (Q8K4F8), CCNF_XENLA  (Q7T0L6), 
CCNF_XENTR  (Q5XGG5), CCNOA_XENLA (Q32NJ2), CCNOB_XENLA (Q32NM1), 
CCSDS_ARATH (Q1PFW3), CCSDS_ORYSJ (Q10PQ9), CG11_CANAL  (Q59YH3), 
CG11_CANAW  (C4YR54), CG11_CANAX  (P0CY18), CG11_YEAST  (P20437), 
CG12_CANAX  (P43062), CG12_YEAST  (P20438), CG13_CANAL  (Q5A1N6), 
CG13_YEAST  (P13365), CG1_COLGL   (Q06374), CG21_CANAL  (Q5ALY0), 
CG21_CANAX  (P47829), CG21_EMENI  (P30284), CG21_SCHPO  (P24865), 
CG21_YEAST  (P24868), CG22_SCHPO  (P36630), CG22_YEAST  (P24869), 
CG23_SCHPO  (P10815), CG23_YEAST  (P24870), CG24_CANAL  (Q5A0A9), 
CG24_YEAST  (P24871), CGH2_SHV21  (Q01043), CGS5_YEAST  (P30283), 
CGS6_YEAST  (P32943), HGC1_CANAL  (Q5ABE2), REM1_SCHPO  (O14332), 
VCYCL_HHV8P (Q77Q36)
» More

UniProtKB/Swiss-Prot
False negative sequences
161 sequences

CCA23_ARATH (Q38819), CCA24_ARATH (Q9C968), CCA32_ARATH (Q9C6A9), 
CCB12_ORYSJ (Q0DWQ7), CCB13_ORYSJ (Q0JNK6), CCB25_ARATH (Q9LM91), 
CCC11_ARATH (Q9FJK6), CCC11_ORYSJ (P93411), CCC12_ARATH (Q9FJK7), 
CCD11_ORYSJ (Q67V81), CCD32_ORYSJ (Q0J3H7), CCD51_ARATH (Q2V3B2), 
CCD51_ORYSJ (Q0DQA9), CCD53_ORYSJ (Q10QA2), CCD61_ARATH (Q9ZR04), 
CCD61_ORYSJ (Q69S43), CCD71_ARATH (Q9LZM0), CCD71_ORYSJ (Q53MB7), 
CCF11_ORYSJ (Q6K1Z1), CCF12_ORYSJ (Q6K8S5), CCF13_ORYSJ (Q6K8S1), 
CCF14_ORYSJ (Q6K8S3), CCH11_ARATH (Q8W5S1), CCH11_ORYSJ (Q10D80), 
CCJ18_ARATH (Q9C5X2), CCL11_ARATH (Q8RWV3), CCL11_ORYSJ (Q9AS36), 
CCL1_YEAST  (P37366), CCN1_TRYBB  (P41179), CCNA1_CAEEL (P34638), 
CCNB3_CAEEL (Q10654), CCNB3_DROME (Q9I7I0), CCNB3_HUMAN (Q8WWL7), 
CCNB3_MOUSE (Q810T2), CCNC_AEDAE  (Q16JA2), CCNC_ANOGA  (Q7QB13), 
CCNC_BOVIN  (Q3ZCK5), CCNC_CAEBR  (P0C654), CCNC_CAEEL  (Q9TYP2), 
CCNC_CHICK  (P55168), CCNC_DICDI  (Q86KE7), CCNC_DROME  (P25008), 
CCNC_DROPS  (Q29AI1), CCNC_HUMAN  (P24863), CCNC_MOUSE  (Q62447), 
CCNC_RAT    (P39947), CCNC_XENLA  (Q4KLA0), CCNC_XENTR  (Q28F72), 
CCND_OSTTA  (Q5SCB5), CCNE_HEMPU  (O15995), CCNG1_BOVIN (Q5E9I1), 
CCNG1_HUMAN (P51959), CCNG1_MOUSE (P51945), CCNG1_PIG   (Q52QT8), 
CCNG1_PONAB (Q5R5D0), CCNG1_RAT   (P39950), CCNH_BOVIN  (Q3ZBL9), 
CCNH_ECHMU  (Q9GP34), CCNH_HUMAN  (P51946), CCNH_MACFA  (Q4R7U4), 
CCNH_MOUSE  (Q61458), CCNH_RAT    (Q9R1A0), CCNH_XENLA  (P51947), 
CCNI2_HUMAN (Q6ZMN8), CCNI_HUMAN  (Q14094), CCNI_MOUSE  (Q9Z2V9), 
CCNJL_HUMAN (Q8IV13), CCNJL_MOUSE (Q5SRT8), CCNJ_HUMAN  (Q5T5M9), 
CCNJ_MOUSE  (Q3TZI6), CCNJ_XENLA  (Q6DFJ9), CCNK_HUMAN  (O75909), 
CCNK_MOUSE  (O88874), CCNL1_CHICK (Q5ZJP9), CCNL1_DANRE (Q7ZVX0), 
CCNL1_HUMAN (Q9UK58), CCNL1_MOUSE (Q52KE7), CCNL1_PONAB (Q5RD50), 
CCNL1_RAT   (Q9R1Q2), CCNL1_XENLA (Q6GN15), CCNL2_HUMAN (Q96S94), 
CCNL2_MOUSE (Q9JJA7), CCNL2_RAT   (Q5I0H5), CCNL2_XENTR (Q5BKF8), 
CCNO_HUMAN  (P22674), CCNO_MOUSE  (P0C242), CCNT1_HORSE (Q9XT26), 
CCNT1_HUMAN (O60563), CCNT1_MOUSE (Q9QWV9), CCNT1_PANTR (Q8HXN7), 
CCNT2_HUMAN (O60583), CCNY_HUMAN  (Q8ND76), CCNY_MOUSE  (Q8BGU5), 
CCP11_ORYSJ (Q0J9W0), CCP21_ORYSJ (Q7FAT5), CCP31_ORYSJ (Q75HV0), 
CCP41_ORYSJ (Q7XC35), CCT11_ARATH (Q9C8P7), CCT11_ORYSJ (Q0E474), 
CCT12_ARATH (Q56YF8), CCT12_ORYSJ (Q6Z7H3), CCT13_ARATH (Q8LBC0), 
CCT13_ORYSJ (Q2RAC5), CCT14_ARATH (Q8GYM6), CCT14_ORYSJ (Q2QQS5), 
CCT15_ARATH (Q9FKE6), CCU11_ARATH (Q9LJ45), CCU21_ARATH (Q9SHD3), 
CCU22_ARATH (Q9M205), CCU31_ARATH (Q8LB60), CCU41_ARATH (O80513), 
CCU42_ARATH (Q9LY16), CCU43_ARATH (Q9FKF6), CCY1A_XENLA (Q5U5D0), 
CCY1B_XENLA (Q6NRF4), CCYL1_DANRE (Q08CI4), CCYL1_HUMAN (Q8N7R7), 
CCYL1_XENTR (Q28EL0), CGM2_SCHPO  (P36613), CGP1_SCHPO  (P87049), 
CLG1_YEAST  (P35190), CTK2_YEAST  (P46962), FA58A_DANRE (Q503D6), 
FA58A_HUMAN (Q8N1B3), FA58A_RAT   (Q4QQW5), FA58A_XENLA (Q6NRK9), 
FA58B_HUMAN (P0C7Q3), FA58B_MOUSE (Q8QZR8), PCL10_YEAST (P53124), 
PCL1_YEAST  (P24867), PCL2_YEAST  (P25693), PCL5_YEAST  (P38794), 
PCL6_YEAST  (P40038), PCL7_YEAST  (P40186), PCL8_YEAST  (Q08966), 
PCL9_YEAST  (Q12477), PHO80_YEAST (P20052), PREG_NEUCR  (Q06712), 
PSL1_SCHPO  (O42979), PUC1_SCHPO  (P25009), SRB11_SCHPO (O94503), 
SSN8_ASHGO  (Q75AX7), SSN8_ASPCL  (A1C7R6), SSN8_ASPFU  (Q4WZT9), 
SSN8_ASPOR  (Q2UDB2), SSN8_ASPTN  (Q0CV29), SSN8_CANAL  (Q5A4H9), 
SSN8_CANGA  (Q6FJE8), SSN8_CHAGB  (Q2GVK1), SSN8_COCIM  (Q1EAW8), 
SSN8_DEBHA  (Q6BYF8), SSN8_EMENI  (Q5BBA8), SSN8_GIBMO  (Q9C1M4), 
SSN8_KLULA  (Q6CP20), SSN8_MAGO7  (A4RD79), SSN8_NEUCR  (Q9HE63), 
SSN8_PICST  (A3LPX1), SSN8_USTMA  (Q4P101), SSN8_YARLI  (Q6CAC7), 
SSN8_YEAST  (P47821), YOJ1_CAEEL  (P34624)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

CCNB1_MEDSA (P30286)

		
PDB
[Detailed view]
111 PDB

1BU2; 1E9H; 1FIN; 1FVV; 1GY3; 1H1P; 1H1Q; 1H1R; 1H1S; 1H24; 1H25; 1H26; 1H27; 1H28; 1JOW; 1JST; 1JSU; 1OGU; 1OI9; 1OIU; 1OIY; 1OKV; 1OKW; 1OL1; 1OL2; 1P5E; 1PKD; 1QMZ; 1URC; 1VIN; 1VYW; 1W98; 1XO2; 2B9R; 2BKZ; 2BPM; 2C4G; 2C5N; 2C5O; 2C5V; 2C5X; 2C6T; 2CCH; 2CCI; 2CJM; 2EUF; 2F2C; 2G9X; 2I40; 2IW6; 2IW8; 2IW9; 2JGZ; 2UUE; 2UZB; 2UZD; 2UZE; 2UZL; 2V22; 2W96; 2W99; 2W9F; 2W9Z; 2WEV; 2WFY; 2WHB; 2WIH; 2WIP; 2WMA; 2WMB; 2WPA; 2WXV; 2X1N; 3BHT; 3BHU; 3BHV; 3DDP; 3DDQ; 3DOG; 3EID; 3EJ1; 3EOC; 3F5X; 3G33; 3MY5; 3QHR; 3QHW; 3TNW; 4BCK; 4BCM; 4BCN; 4BCO; 4BCP; 4BCQ; 4CFN; 4CFW; 4EOI; 4EOJ; 4EOK; 4EOL; 4EOM; 4EON; 4EOO; 4EOP; 4EOQ; 4EOR; 4EOS; 4FX3; 4I3Z; 4II5; 4TTH
» More

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