Entry: PS00299

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General information about the entry

Entry name [info] UBIQUITIN_1
Accession [info] PS00299
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00271

Name and characterization of the entry

Description [info] Ubiquitin domain signature.
Pattern [info]
K-x(2)-[LIVM]-x-[DESAK]-x(3)-[LIVM]-[PAQ]-x(3)-Q-x-[LIVM]-[LIVMC]-
[LIVMFY]-x-G-x(4)-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 451 in 198 different sequences
Number of true positive hits 451 in 198 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 200
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 69.28 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 11
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
198 sequences

BAG6_HUMAN  (P46379), BAG6_MOUSE  (Q9Z1R2), BAG6_ORNAN  (A7X5R6), 
BAG6_PIG    (A5D9M6), BAG6_RAT    (Q6MG49), DSK2_YEAST  (P48510), 
NEDD8_BOVIN (P61282), NEDD8_CAEEL (Q93725), NEDD8_DICDI (Q54XV3), 
NEDD8_DROME (Q9VJ33), NEDD8_HUMAN (Q15843), NEDD8_MOUSE (P29595), 
NEDD8_RABIT (Q4PLJ0), NEDD8_RAT   (Q71UE8), R27AA_ARATH (P59271), 
R27AA_ORYSJ (Q9ARZ9), R27AB_ARATH (P59232), R27AB_ORYSJ (P51431), 
R27AC_ARATH (P59233), RL401_CHLRE (P0CH11), RL401_SCHPO (P0CH06), 
RL401_YEAST (P0CH08), RL402_SCHPO (P0CH07), RL402_TRYCR (P0CH27), 
RL402_YEAST (P0CH09), RL403_CHLRE (P0CH10), RL40A_ARATH (B9DHA6), 
RL40A_ORYSJ (P0CH34), RL40B_ARATH (Q42202), RL40B_ORYSJ (P0CH35), 
RL40_ACACA  (P49633), RL40_BOVIN  (P63048), RL40_BRARP  (P51423), 
RL40_CAEEL  (P49632), RL40_CANFA  (P63050), RL40_CRYNJ  (P40909), 
RL40_DICDI  (P14794), RL40_DROME  (P18101), RL40_EIMBO  (P46575), 
RL40_FELCA  (P63052), RL40_HUMAN  (P62987), RL40_LEIMA  (P69201), 
RL40_MACFA  (P0C273), RL40_MOUSE  (P62984), RL40_NEUCR  (P0C224), 
RL40_NICSY  (P49636), RL40_OPHHA  (P68205), RL40_PIG    (P63053), 
RL40_PONPY  (P0C275), RL40_RAT    (P62986), RL40_SHEEP  (P0C276), 
RL40_TETPY  (P33190), RL40_TETTS  (P0DJ25), RL40_TRYBB  (P21899), 
RL40_TRYCR  (P14795), RS271_HORVU (P0CG86), RS272_HORVU (P0CG87), 
RS27A_BOVIN (P62992), RS27A_CAEBR (P37164), RS27A_CAEEL (P37165), 
RS27A_CAVPO (P62978), RS27A_CHICK (P79781), RS27A_DAUCA (P59272), 
RS27A_DICDI (P14797), RS27A_DROME (P15357), RS27A_HUMAN (P62979), 
RS27A_ICTPU (P68200), RS27A_KLULA (P69061), RS27A_LUPAL (P47905), 
RS27A_MAIZE (P27923), RS27A_MANSE (P29504), RS27A_MOUSE (P62983), 
RS27A_NEUCR (P14799), RS27A_PLUXY (P68202), RS27A_RAT   (P62982), 
RS27A_SCHPO (P0C016), RS27A_SOLLC (P62980), RS27A_SOLTU (P62981), 
RS27A_SPOFR (P68203), RS27A_YEAST (P05759), RS27B_SCHPO (P0C8R3), 
RUB1_ARATH  (Q9SHE7), RUB1_DESAN  (P0C073), RUB1_ORYSJ  (P0C030), 
RUB1_YEAST  (Q03919), RUB2_ARATH  (Q8RUC6), RUB2_ORYSJ  (P0C031), 
RUB3_ARATH  (O65381), RUB3_ORYSJ  (P0C032), UB4AA_ONCMY (C1BGZ8), 
UB4AA_SALSA (B5XFI8), UB4AB_ONCMY (C1BHN7), UB4AB_SALSA (B5X9S9), 
UBB_BOVIN   (P0CG53), UBB_CAVPO   (P0CG54), UBB_CHICK   (P0CG62), 
UBB_GORGO   (P0CG67), UBB_HORSE   (Q8MKD1), UBB_HUMAN   (P0CG47), 
UBB_MOUSE   (P0CG49), UBB_PANTR   (P0CG65), UBB_PONPY   (P0CG60), 
UBB_RAT     (P0CG51), UBB_SHEEP   (P0CG55), UBC_BOVIN   (P0CH28), 
UBC_GORGO   (P0CG66), UBC_HUMAN   (P0CG48), UBC_MOUSE   (P0CG50), 
UBC_PANTR   (P0CG64), UBC_PIG     (P0CG68), UBC_PONPY   (P0CG61), 
UBC_RAT     (Q63429), UBFD1_HUMAN (O14562), UBFD1_MOUSE (Q78JW9), 
UBI1P_CANAX (P0CG73), UBI1P_NICSY (P0CG85), UBI1P_PETCR (P0CH04), 
UBI2P_PETCR (P0CH05), UBI4P_CANAX (P0CG74), UBI4P_KLULA (P0CG75), 
UBI4P_NEUCR (P0CG70), UBI4P_NICSY (P0CG84), UBI4P_SCHPO (P0CG72), 
UBI4P_YEAST (P0CG63), UBIL_NPVAC  (P16709), UBIL_NPVOP  (Q05120), 
UBIM_BOVIN  (P62865), UBIM_HUMAN  (P35544), UBIM_MOUSE  (P35545), 
UBIM_MUSSI  (P62868), UBIM_PIG    (P55812), UBIM_PONAB  (P0C2F1), 
UBIM_RAT    (Q05474), UBIQ1_CAEEL (P0CG71), UBIQA_DICDI (P0CG76), 
UBIQD_DICDI (P0CG77), UBIQF_DICDI (P0CG78), UBIQG_DICDI (P0CG79), 
UBIQH_DICDI (P0CG81), UBIQI_DICDI (P0CG80), UBIQJ_DICDI (P0CG88), 
UBIQP_ACEPE (P42739), UBIQP_AGLNE (P42740), UBIQP_AVEFA (P69309), 
UBIQP_CRIGR (P62976), UBIQP_DROME (P0CG69), UBIQP_EUPEU (P23324), 
UBIQP_GEOCY (P59669), UBIQP_HORVU (P0CG83), UBIQP_LINUS (P69315), 
UBIQP_PEA   (P69322), UBIQP_PHYIN (P22589), UBIQP_SOYBN (P69325), 
UBIQP_STRPU (P23398), UBIQP_TETPY (P0CG82), UBIQP_XENLA (P62972), 
UBIQ_AVESA  (P69310), UBIQ_CAMDR  (Q865C5), UBIQ_CERCA  (P68197), 
UBIQ_COPCO  (P19848), UBIQ_ENCCU  (Q8SWD4), UBIQ_HELAN  (P69313), 
UBIQ_LUMTE  (P84589), UBIQ_LUPPO  (P69317), UBIQ_RABIT  (P62975), 
UBIQ_WHEAT  (P69326), UBL1_SCHPO  (O14399), UBL4A_ANOFI (C3KHF2), 
UBL4A_CALJA (B0KWT6), UBL4A_CALMO (B1MTV8), UBL4A_DANRE (Q7ZWB2), 
UBL4A_ESOLU (C1BXU5), UBL4A_HUMAN (P11441), UBL4A_MOUSE (P21126), 
UBL4A_PONAB (Q5R4T1), UBL4A_RABIT (B7NZQ9), UBL4A_RAT   (B2GV38), 
UBL4A_RHIFE (B2KIK3), UBL4A_XENLA (Q0D261), UBL4A_XENTR (A4QND0), 
UBL4B_BOVIN (Q2T9Q2), UBL4B_MONDO (Q19KS6), UBP14_BOVIN (Q0IIF7), 
UBP14_HUMAN (P54578), UBP14_MOUSE (Q9JMA1), UBP14_PANTR (P60051), 
UBP14_RABIT (P40826), UBP6_ARATH  (Q949Y0), UBP6_SCHPO  (Q92353), 
UBP7_ARATH  (Q84WC6), UBQ10_ARATH (Q8H159), UBQ11_ARATH (P0CH33), 
UBQ12_ARATH (Q3E7K8), UBQ14_ARATH (Q3E7T8), UBQ3_ARATH  (Q1EC66), 
UBQ3_ORYSJ  (Q58G87), UBQ4_ARATH  (P0CH32), UBQ9_ARATH  (Q9FHQ6)
» More

UniProtKB/Swiss-Prot
False negative sequences
200 sequences

ANR60_HUMAN (Q9BZ19), BAG1_ARATH  (Q0WUQ1), BAG1_HUMAN  (Q99933), 
BAG1_MOUSE  (Q60739), BAG1_RAT    (B0K019), BAG2_ARATH  (Q0WPX7), 
BAG3_ARATH  (Q9LYP4), BAG4_ARATH  (Q8RX71), BAG6A_XENLA (Q9YHD3), 
BAG6B_XENLA (Q6PA26), BAG6_DANRE  (A3KPW9), BAG6_XENTR  (A4IH17), 
DDI1_COCIM  (Q1DNB9), DDI1_DEBHA  (Q6BK42), DSK2A_ARATH (Q9SII9), 
DSK2B_ARATH (Q9SII8), ELOB_HUMAN  (Q15370), HUB1_ASHGO  (Q756X3), 
HUB1_CANGA  (Q6FIX7), HUB1_DEBHA  (Q6BUP7), HUB1_KLULA  (Q6CU12), 
HUB1_SCHPO  (O94650), HUB1_YEAST  (Q6Q546), IQUB_HUMAN  (Q8NA54), 
IQUB_MACFA  (Q4R6T7), IQUB_MOUSE  (Q8CDK3), IQUB_RAT    (Q45GW3), 
MDY2_YEAST  (Q12285), MUB1_ARATH  (Q9MAB9), MUB1_ORYSJ  (Q75GT2), 
MUB2_ARATH  (Q8LCS8), MUB2_ORYSJ  (Q67UI2), MUB3_ARATH  (Q9SW27), 
MUB3_ORYSJ  (Q6Z8K4), MUB4_ARATH  (Q9LSD8), MUB4_ORYSJ  (Q7XRU4), 
MUB5_ARATH  (Q9SH14), MUB6_ARATH  (Q8GWJ6), NED82_DICDI (Q54L35), 
NF2IP_HUMAN (Q8NCF5), NF2IP_MACFA (Q9GLZ9), NF2IP_MOUSE (O09130), 
NF2IP_RAT   (Q6AYG7), NF2IP_XENTR (Q0P4K8), OASL1_MOUSE (Q8VI94), 
OASL1_RAT   (G3V645), OASL2_MOUSE (Q9Z2F2), OASL2_RAT   (Q5MYT9), 
OASL_HUMAN  (Q15646), OTU1_CHICK  (Q5F3A6), OTU1_DANRE  (Q567B1), 
OTU1_DROME  (Q9VRJ9), OTU1_DROPS  (Q29FC9), OTU1_XENLA  (Q0IH43), 
P4KG2_ARATH (Q9SGW8), P4KG3_ARATH (Q9FNF8), P4KG4_ARATH (Q9ZPY9), 
P4KG5_ARATH (Q9C671), P4KG6_ARATH (Q8W4R8), P4KG7_ARATH (Q9SI52), 
PIRL8_ORYSJ (Q7XDQ7), PRKN2_HUMAN (O60260), PRKN2_MOUSE (Q9WVS6), 
PRKN2_RAT   (Q9JK66), RAD23_DICDI (Q54LV1), RAD23_ORYSJ (Q40742), 
RAD23_YEAST (P32628), RD23A_ARATH (Q84L32), RD23A_BOVIN (A3KMV2), 
RD23A_HUMAN (P54725), RD23A_MOUSE (P54726), RD23B_ARATH (Q84L33), 
RD23B_BOVIN (Q29RK4), RD23B_HUMAN (P54727), RD23B_MOUSE (P54728), 
RD23B_RAT   (Q4KMA2), RD23C_ARATH (Q84L31), RD23D_ARATH (Q84L30), 
RL40_CHICK  (P62985), RL40_LEITA  (P69200), RS27A_ASPOF (P31753), 
SACS_HUMAN  (Q9NZJ4), SACS_MOUSE  (Q9JLC8), SF3A1_ARATH (Q8RXF1), 
SUMO1_ARATH (P55852), SUMO1_ORYSJ (P55857), SUMO2_ARATH (Q9FLP6), 
SUMO3_ARATH (Q9FLP5), SUMO4_ARATH (Q9FKC5), SUMO5_ARATH (Q8VZI7), 
SUMO6_ARATH (Q9FKC6), SUMO7_ARATH (Q3E8A8), SUMO8_ARATH (B3H5R8), 
TAF1B_ARATH (Q6PUA2), TAF1_ARATH  (Q8LRK9), TAF1_ORYSJ  (Q67W65), 
TBCEL_HUMAN (Q5QJ74), TBCEL_MOUSE (Q8C5W3), TBCEL_RAT   (Q5PQJ7), 
TBK1_HUMAN  (Q9UHD2), TBK1_MOUSE  (Q9WUN2), TBK1_XENLA  (Q6DFJ6), 
TBP1_ORYSJ  (Q9LL45), TECR_CAEEL  (Q9N5Y2), TMUB1_DANRE (Q6P135), 
TMUB1_RAT   (Q53AQ4), TMUB1_XENLA (Q3KPV4), TMUB1_XENTR (Q4V9Y1), 
TMUB2_BOVIN (Q2HJA8), TMUB2_HUMAN (Q71RG4), TMUB2_MOUSE (Q3V209), 
TMUB2_RAT   (Q4FZV7), TRP1_ARATH  (Q8L7L8), TRP2_ARATH  (Q9SNB9), 
TRP3_ARATH  (Q9C7B1), TRP4_ARATH  (Q9FFY9), TRP5_ARATH  (Q6R0E3), 
TRP6_ARATH  (Q9M347), U1125_ARATH (Q84WS8), UBCP1_BOVIN (Q2KJD7), 
UBCP1_CHICK (Q5ZJJ8), UBCP1_DANRE (Q6DI37), UBCP1_HUMAN (Q8WVY7), 
UBCP1_MOUSE (Q8BGR9), UBCP1_PONAB (Q5R4C4), UBCP1_RAT   (Q5FWT7), 
UBCP1_XENLA (Q641F1), UBCP1_XENTR (Q28EX9), UBCP_ARATH  (Q8W3M6), 
UBIML_HUMAN (A6NDN8), UBIM_CRIGR  (Q60435), UBL3_BOVIN  (Q2TA46), 
UBL3_HUMAN  (O95164), UBL3_MOUSE  (Q9Z2M6), UBL3_RAT    (Q5BJT2), 
UBL4B_HUMAN (Q8N7F7), UBL4B_MOUSE (Q9CQ84), UBL5_ARATH  (Q9FGZ9), 
UBL5_BOVIN  (Q3T0Z3), UBL5_CAEEL  (P91302), UBL5_DANRE  (Q7SXF2), 
UBL5_DICDI  (Q54Q03), UBL5_DROME  (Q9V998), UBL5_HUMAN  (Q9BZL1), 
UBL5_MESAU  (Q6EGX7), UBL5_MOUSE  (Q9EPV8), UBL5_PSAOB  (Q791B0), 
UBP26_ARATH (Q9SCJ9), UBP26_ORYSI (A2XDG4), UBP26_ORYSJ (A3AF13), 
UBP48_CHICK (Q5ZM45), UBP48_HUMAN (Q86UV5), UBP48_MOUSE (Q3V0C5), 
UBP48_RAT   (Q76LT8), UBP4_BOVIN  (A6QR55), UBP4_HUMAN  (Q13107), 
UBP4_MOUSE  (P35123), UBP4_PONAB  (Q5RCD3), UBP4_RAT    (B2GUZ1), 
UBP6_YEAST  (P43593), UBQ8_ARATH  (Q39256), UBQL1_HUMAN (Q9UMX0), 
UBQL1_MOUSE (Q8R317), UBQL1_PONAB (Q5R684), UBQL1_RAT   (Q9JJP9), 
UBQL2_HUMAN (Q9UHD9), UBQL2_MOUSE (Q9QZM0), UBQL3_HUMAN (Q9H347), 
UBQL3_MOUSE (Q8C5U9), UBQL4_HUMAN (Q9NRR5), UBQL4_MOUSE (Q99NB8), 
UBQL_DICDI  (Q9NIF3), UBTD1_BOVIN (Q3ZBQ1), UBTD1_DANRE (Q4V8W7), 
UBTD1_HUMAN (Q9HAC8), UBTD1_MOUSE (Q91WB7), UBTD1_RAT   (Q68FV8), 
UBTD1_XENLA (Q640W6), UBTD1_XENTR (Q6GL38), UBTD2_BOVIN (Q5EAE3), 
UBTD2_DANRE (Q6DG43), UBTD2_HUMAN (Q8WUN7), UBTD2_MOUSE (Q6PGH0), 
UHRF1_BOVIN (A7E320), UHRF1_DANRE (E7EZF3), UHRF1_HUMAN (Q96T88), 
UHRF1_MOUSE (Q8VDF2), UHRF1_RAT   (Q7TPK1), UHRF1_XENLA (B6CHA3), 
UHRF1_XENTR (F6UA42), UHRF2_HUMAN (Q96PU4), UHRF2_MOUSE (Q7TMI3), 
UPL5_ARATH  (Q9SU29), USA1_YEAST  (Q03714), Y2010_ARATH (P0C895), 
YB92_SCHPO  (O42967), YHLC_SCHPO  (Q9HGL0), YQ77_SCHPO  (O94580), 
ZFAN4_HUMAN (Q86XD8), ZFAN4_MOUSE (D3Z3C6)
» More

PDB
[Detailed view]
243 PDB

1AAR; 1BT0; 1C3T; 1CMX; 1D3Z; 1F9J; 1FXT; 1G6J; 1NBF; 1NDD; 1OGW; 1OTR; 1P3Q; 1Q0W; 1Q5W; 1R4M; 1R4N; 1S1Q; 1SIF; 1TBE; 1UBI; 1UBQ; 1UD7; 1UZX; 1V80; 1V81; 1V86; 1WGG; 1WR1; 1WR6; 1WRD; 1WX9; 1XD3; 1XQQ; 1XT9; 1YD8; 1YX5; 1YX6; 1ZGU; 1ZW7; 2AYO; 2BGF; 2BKR; 2BWE; 2BWF; 2C7M; 2C7N; 2D3G; 2DEN; 2DX5; 2DZI; 2FID; 2FIF; 2FUH; 2G3Q; 2G45; 2GBJ; 2GBK; 2GMI; 2HD5; 2HTH; 2IBI; 2J7Q; 2JF5; 2JRI; 2JT4; 2JWZ; 2JY6; 2JZZ; 2K25; 2K39; 2K6D; 2K8B; 2K8C; 2KDE; 2KDF; 2KHW; 2KJH; 2KLG; 2KN5; 2KO3; 2KOX; 2KTF; 2KWU; 2KWV; 2KX0; 2L00; 2L0F; 2L0T; 2L3Z; 2L7R; 2LD9; 2LJ5; 2LVO; 2LVP; 2LVQ; 2LZ6; 2MBH; 2MBO; 2MBQ; 2MCN; 2MJ5; 2MJB; 2NR2; 2NVU; 2O6V; 2OJR; 2OOB; 2PE9; 2PEA; 2QHO; 2RR9; 2W9N; 2WDT; 2WWZ; 2WX0; 2WX1; 2XBB; 2XEW; 2XK5; 2Y5B; 2Z59; 2ZCB; 2ZCC; 2ZNV; 2ZVN; 2ZVO; 3A1Q; 3A33; 3A9J; 3A9K; 3AI5; 3ALB; 3AUL; 3AXC; 3B08; 3B0A; 3BY4; 3C0R; 3CMM; 3DBH; 3DBL; 3DBR; 3DQV; 3DVG; 3DVN; 3EEC; 3EFU; 3EHV; 3GZN; 3H1U; 3H7P; 3H7S; 3HM3; 3I3T; 3IFW; 3IHP; 3JSV; 3JVZ; 3JW0; 3K9O; 3K9P; 3KVF; 3KW5; 3L0W; 3L10; 3LDZ; 3M3J; 3M63; 3MHS; 3MTN; 3N30; 3N32; 3N3K; 3NHE; 3NOB; 3NS8; 3O65; 3OJ3; 3OJ4; 3OLM; 3ONS; 3PHW; 3PRM; 3PT2; 3PTF; 3Q3F; 3RUL; 3TBL; 3TMP; 3U30; 3UGB; 3V6C; 3V6E; 3VFK; 3VHT; 3VUW; 3VUX; 3VUY; 3ZLZ; 3ZNH; 3ZNI; 3ZNZ; 4AUQ; 4BBN; 4BOS; 4BOZ; 4BVU; 4DDG; 4DDI; 4DHJ; 4DHZ; 4DWF; 4EEW; 4F8C; 4FBJ; 4FJV; 4HCN; 4HCP; 4HK2; 4HXD; 4I6N; 4IG7; 4II3; 4IUM; 4JIO; 4JQW; 4K1R; 4K7S; 4K7U; 4K7W; 4KSK; 4KSL; 4LCD; 4LDT; 4LJO; 4LJP; 4M0W; 4MDK; 4MSM; 4MSQ; 4NNJ; 4NQK
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