Entry: PS00303

General information about the entry
Entry name S100_CABP
Accession number PS00303
Entry type PATTERN
Date APR-1990 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00275
Name and characterization of the entry
DescriptionS-100/ICaBP type calcium binding protein signature.
Pattern [LIVMFYW](2)-x(2)-[LKQ]-D-x(3)-[DN]-x(3)-[DNSG]-[FY]-x-[ES]-[FYVC]-x(2)- [LIVMFS]-[LIVMF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 92 hits in 92 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 85 hits in 85 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 7 hits in 7 different sequences
  • Number of known missed hits: 14
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 92.39 %
  • Recall (true hits / (true hits + false negatives)): 85.86 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CML30_ARATH (Q9MBG5), FILA2_HUMAN (Q5D862), FILA2_MOUSE (Q2VIS4), 
FILA_HUMAN  (P20930), HORN_HUMAN  (Q86YZ3), HORN_MOUSE  (Q8VHD8), 
M126_CHICK  (P28318), RPTN_HUMAN  (Q6XPR3), RPTN_MOUSE  (P97347), 
S100B_BOVIN (P02638), S100B_HUMAN (P04271), S100B_MOUSE (P50114), 
S100B_RABIT (Q6YNR6), S100B_RAT   (P04631), S100G_BOVIN (P02633), 
S100G_HORSE (Q865V3), S100G_HUMAN (P29377), S100G_MOUSE (P97816), 
S100G_PIG   (P02632), S100G_RAT   (P02634), S100P_HUMAN (P25815), 
S100Z_HUMAN (Q8WXG8), S10A1_BOVIN (P02639), S10A1_HUMAN (P23297), 
S10A1_MISFO (Q7LZT1), S10A1_MOUSE (P56565), S10A1_PONAB (Q5RC36), 
S10A1_RAT   (P35467), S10A2_BOVIN (P10462), S10A2_HUMAN (P29034), 
S10A3_HUMAN (P33764), S10A3_MOUSE (P62818), S10A3_RAT   (P62819), 
S10A4_BOVIN (P35466), S10A4_CANFA (Q9TV56), S10A4_HUMAN (P26447), 
S10A4_MOUSE (P07091), S10A4_RAT   (P05942), S10A5_HUMAN (P33763), 
S10A5_MOUSE (P63084), S10A5_RAT   (P63083), S10A6_CHICK (Q98953), 
S10A6_HORSE (O77691), S10A6_HUMAN (P06703), S10A6_MOUSE (P14069), 
S10A6_PIG   (Q2EN75), S10A6_RABIT (P30801), S10A6_RAT   (P05964), 
S10A7_BOVIN (Q28050), S10A7_HORSE (Q14ST5), S10A7_HUMAN (P31151), 
S10A8_BOVIN (P28782), S10A8_HUMAN (P05109), S10A8_MOUSE (P27005), 
S10A8_RAT   (P50115), S10A9_BOVIN (P28783), S10A9_HUMAN (P06702), 
S10A9_MOUSE (P31725), S10A9_RABIT (P50117), S10A9_RAT   (P50116), 
S10AA_BOVIN (P60902), S10AA_CHICK (P27003), S10AA_HUMAN (P60903), 
S10AA_MACMU (P62504), S10AA_MOUSE (P08207), S10AA_PIG   (P04163), 
S10AA_RABIT (Q6SQH4), S10AA_RAT   (P05943), S10AB_CHICK (P24479), 
S10AB_HUMAN (P31949), S10AB_MOUSE (P50543), S10AB_PIG   (P31950), 
S10AB_RABIT (P24480), S10AB_RAT   (Q6B345), S10AC_BOVIN (P79105), 
S10AC_HUMAN (P80511), S10AC_PIG   (P80310), S10AC_RABIT (O77791), 
S10AG_BOVIN (Q0VCM0), S10AG_HUMAN (Q96FQ6), S10I_ICTPU  (Q91061), 
S1A7A_HUMAN (Q86SG5), TRHY_HUMAN  (Q07283), TRHY_RABIT  (P37709), 
TRHY_SHEEP  (P22793)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
S10AA_XENLA (P27004), S10AD_BOVIN (P79342), S10AD_HUMAN (Q99584), 
S10AD_MOUSE (P97352), S10AE_BOVIN (Q3MHP3), S10AE_HUMAN (Q9HCY8), 
S10AE_MOUSE (Q9D2Q8), S115A_GORGO (A7K6Y8), S115A_MOUSE (Q6S5I3), 
S115A_PONAB (A7K6Y9), S1A7B_HUMAN (Q5SY68), TCHL1_BOVIN (A6QP92), 
TCHL1_HUMAN (Q5QJ38), TCHL1_MOUSE (Q9D3P1)
False positive hits (sequences which do not belong to the set under consideration):
CABP7_HUMAN (Q86V35), CABP7_MOUSE (Q91ZM8), CABP7_PAPAN (Q866X0), 
CABP7_RAT   (Q66H96), CABP8_HUMAN (Q9BXU9), CABP8_MOUSE (Q9JJG7), 
CABP8_RAT   (Q06BI3)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1A03; 1A4P; 1B1G; 1B4C; 1BOC; 1BOD; 1BT6; 1CB1; 1CDN; 1CFP; 1CLB; 1CNP; 1D1O; 1DT7; 1E8A; 1GQM; 1HT9; 1IG5; 1IGV; 1IRJ; 1J55; 1JWD; 1K2H; 1K96; 1K9K; 1K9P; 1KCY; 1KQV; 1KSM; 1KSO; 1M31; 1MHO; 1MQ1; 1MR8; 1MWN; 1N65; 1NSH; 1ODB; 1OZO; 1PSB; 1PSR; 1QLK; 1QLS; 1SYM; 1UWO; 1XK4; 1XYD; 1ZFS; 2BCA; 2BCB; 2CNP; 2H61; 2JPT; 2JTT; 2K2F; 2K7O; 2KAX; 2KAY; 2KBM; 2L0P; 2L50; 2L51; 2LHL; 2LLS; 2LLT; 2LLU; 2LNK; 2LP2; 2LP3; 2PRU; 2PSR; 2Q91; 2RGI; 2WC8; 2WCB; 2WCF; 2WND; 2WOR; 2WOS; 3C1V; 3CGA; 3CR2; 3CR4; 3CR5; 3CZT; 3D0Y; 3D10; 3GK1; 3GK2; 3GK4; 3HCM; 3ICB; 3IQO; 3IQQ; 3KO0; 3LK0; 3LK1; 3LLE; 3M0W; 3NSI; 3NSK; 3NSL; 3NSO; 3NXA; 3PSR; 3RLZ; 3RM1; 3ZWH; 4AQI; 4AQJ; 4DIR; 4DRW; 4DUQ; 4ETO; 4FQO; 4FTG; 4GGF; 4HRE; 4HRG; 4HRH; 4HSZ; 4ICB;

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