Entry: PS00311

General information about the entry

Entry name [info] LAMP_2
Accession [info] PS00311
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); JUN-1994 (DATA UPDATE); JUL-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00280

Name and characterization of the entry

Description [info] LAMP glycoproteins transmembrane and cytoplasmic domain signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_09 which contains 549'215 sequence entries.

Total number of hits 12 in 12 different sequences
Number of true positive hits 12 in 12 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 92.31 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
12 sequences

CD68_HUMAN  (P34810), CD68_MOUSE  (P31996), LAMP1_BOVIN (Q05204), 
LAMP1_CHICK (P05300), LAMP1_CRIGR (P49129), LAMP1_HUMAN (P11279), 
LAMP1_MOUSE (P11438), LAMP1_RAT   (P14562), LAMP2_CRIGR (P49130), 
LAMP2_HUMAN (P13473), LAMP2_MOUSE (P17047), LAMP2_RAT   (P17046)
» More

False negative sequences
1 sequence

LAMP2_CHICK (Q90617)


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission