Entry: PS00322

General information about the entry

Entry name [info] HISTONE_H3_1
Accession [info] PS00322
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00287

Name and characterization of the entry

Description [info] Histone H3 signature 1.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_05 which contains 548'454 sequence entries.

Total number of hits 172 in 172 different sequences
Number of true positive hits 169 in 169 different sequences
Number of 'unknown' hits
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 13
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 98.26 %
Recall (true positives / (true positives + false negatives)) 92.86 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
169 sequences

H31T_HUMAN  (Q16695), H31_BOVIN   (P68432), H31_CANAL   (Q59VN2), 
H31_CHLRE   (Q42681), H31_DEBHA   (Q6BRZ5), H31_ENCCU   (Q8SS77), 
H31_HUMAN   (P68431), H31_LODEL   (A5DWE2), H31_MOUSE   (P68433), 
H31_MUSPA   (Q6LBF0), H31_PICGU   (A5DFC5), H31_PICST   (A3LXD5), 
H31_RAT     (Q6LED0), H31_SCHPO   (P09988), H31_TETPY   (P69149), 
H31_TETTH   (P69150), H31_USTMA   (Q4P7J7), H32_ARATH   (P59226), 
H32_ASPOF   (Q6LBE3), H32_BOVIN   (P84227), H32_BRANA   (Q6LCK1), 
H32_CAIMO   (P84230), H32_CHICK   (P84229), H32_CHLRE   (Q6LCW8), 
H32_CICIN   (Q5MYA4), H32_CRILO   (Q64400), H32_DANRE   (Q4QRF4), 
H32_ENCAL   (P08903), H32_EUPES   (Q71T45), H32_HUMAN   (Q71DI3), 
H32_ICTBU   (P84231), H32_LILLO   (Q402E1), H32_MAIZE   (P69246), 
H32_MEDSA   (P68429), H32_MOUSE   (P84228), H32_MUSPA   (Q6LBE8), 
H32_ONCMY   (P84234), H32_ONOVI   (P68430), H32_ORYSI   (A2Y533), 
H32_ORYSJ   (Q2RAD9), H32_PEA     (P68427), H32_PETCR   (P69248), 
H32_PORAF   (P84232), H32_TETAM   (P69110), H32_TETAU   (P69111), 
H32_TETCA   (P69112), H32_TETCU   (P69113), H32_TETEL   (P69114), 
H32_TETFU   (P69115), H32_TETHY   (P69116), H32_TETLE   (P69117), 
H32_TETMA   (P69118), H32_TETMI   (P69119), H32_TETNA   (P69120), 
H32_TETNI   (P69121), H32_TETPA   (P69123), H32_TETPI   (P69124), 
H32_TETPR   (P69122), H32_TETRO   (P69125), H32_TETSO   (P69126), 
H32_TETTR   (P69127), H32_TOBAC   (Q76MV0), H32_USTMA   (Q4PB04), 
H32_WHEAT   (P68428), H32_XENLA   (P84233), H32_XENTR   (Q28D37), 
H331_CAEEL  (Q10453), H332_CAEEL  (Q9U281), H33A_LILLO  (Q402E2), 
H33B_LILLO  (Q2Z2F4), H33L3_CAEEL (Q27489), H33_ARATH   (P59169), 
H33_BOVIN   (Q5E9F8), H33_CANAL   (Q5ADQ0), H33_CAPAN   (Q6RUR1), 
H33_CHICK   (P84247), H33_CHLRE   (P50564), H33_DANRE   (Q6PI20), 
H33_DEBHA   (Q6BMU4), H33_DROHY   (P84250), H33_DROME   (P84249), 
H33_GOSHI   (Q71V89), H33_HUMAN   (P84243), H33_LODEL   (A5E094), 
H33_LOLMU   (Q3C2E5), H33_LOLTE   (P69245), H33_MEDSA   (P69244), 
H33_MOUSE   (P84244), H33_ORYCO   (Q71U98), H33_ORYSI   (A2XHJ3), 
H33_ORYSJ   (Q0JCT1), H33_PICGU   (A5DG57), H33_PICST   (A3GHN6), 
H33_PIG     (Q71LE2), H33_PINPS   (Q711T2), H33_PONAB   (Q5RCC9), 
H33_RABIT   (P84246), H33_RAT     (P84245), H33_SCHPO   (P10651), 
H33_SPISO   (P84248), H33_STYLE   (P81197), H33_TETPY   (P15512), 
H33_TETTS   (P41353), H33_TOBAC   (Q76N23), H33_TRIPS   (Q8WSF1), 
H33_VITVI   (Q71H73), H33_XENLA   (Q6PI79), H33_XENTR   (Q6P823), 
H34_TETTS   (Q22RG7), H35_STYLE   (P81199), H36_STYLE   (P81200), 
H37_STYLE   (P81201), H38_STYLE   (P81202), H39_STYLE   (P81196), 
H3C_BOVIN   (A5PK61), H3C_CAIMO   (P06902), H3C_HUMAN   (Q6NXT2), 
H3C_MOUSE   (P02301), H3C_XENLA   (P02302), H3L2_LILLO  (Q9XG57), 
H3L3_LILLO  (Q2Z2F6), H3L5_ARATH  (Q9FKQ3), H3_ACRFO    (P22843), 
H3_AJECA    (Q9P427), H3_ASHGO    (Q757N1), H3_ASPCL    (A1CP80), 
H3_ASPFU    (P61832), H3_ASPNC    (A2QRR5), H3_ASPOR    (Q2UCQ0), 
H3_ASPTN    (Q0D0E8), H3_CAEEL    (P08898), H3_CANGA    (P61833), 
H3_CHAGB    (Q6DL03), H3_CHITH    (P84238), H3_COCIM    (Q1E225), 
H3_CRYNB    (P0CO05), H3_CRYNJ    (P0CO04), H3_DERIM    (P69071), 
H3_DROHY    (P84236), H3_DROME    (P02299), H3_EMENI    (P23753), 
H3_EUPCR    (P90543), H3_GIBZE    (Q4IER8), H3_GRIJA    (Q7XYZ0), 
H3_HYPJE    (P61835), H3_KLULA    (P61831), H3_LYTPI    (P69072), 
H3_MAGO7    (A4RCX7), H3_MARPO    (Q5DWI3), H3_MORAP    (Q9HDN1), 
H3_NEOFI    (A1D240), H3_NEUCR    (P07041), H3_PARLI    (P69073), 
H3_PENFN    (P61834), H3_PHANO    (Q0UY45), H3_PISBR    (P69074), 
H3_PISOC    (P69075), H3_PLADU    (P84235), H3_PSAMI    (P69076), 
H3_PYCHE    (P69077), H3_SOLST    (P69078), H3_STRDR    (P69079), 
H3_STRPU    (P06352), H3_TIGCA    (P84237), H3_URECA    (P84239), 
H3_VOLCA    (P08437), H3_YARLI    (Q6C0C4), H3_YEAST    (P61830), 
H3_ZYGBA    (P61836)
» More

False negative sequences
13 sequences

H31_STYLE   (P81195), H33B_DICDI  (Q55BN9), H33C_DICDI  (Q55BP0), 
H33L1_CAEEL (Q27490), H33L2_CAEEL (Q27532), H34_STYLE   (P81198), 
H3CL_BOVIN  (Q3SZB8), H3L_ENCCU   (Q8SQP3), H3V1_DICDI  (Q54F38), 
H3V2_DICDI  (Q54Z07), H3_ENTHI    (Q06196), H3_LEIIN    (P40285), 
H3_MASBA    (Q9U7D1)
» More

'Partial' sequences
4 sequences

H32_TETBO   (P17319), H33_HORVU   (P06353), H3_LITVA    (P83864), 
H3_NARPS    (P80553)
» More

False positive sequences
3 sequences


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1KX5; 1PU9; 1PUA; 2KWK; 4GU0; 4GUR; 4GUS

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