Entry: PS00322

General information about the entry

Entry name [info] HISTONE_H3_1
Accession [info] PS00322
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-DEC-2004 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00287

Name and characterization of the entry

Description [info] Histone H3 signature 1.
Pattern [info] 
K-A-P-R-K-[QH]-[LI].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 172 in 172 different sequences
Number of true positive hits 169 in 169 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 13
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 98.26 %
Recall (true positives / (true positives + false negatives)) 92.86 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 169 sequences 

H31T_HUMAN  (Q16695    ), H31_BOVIN   (P68432    ), H31_CANAL   (Q59VN2    ), 

H31_CHLRE   (Q42681    ), H31_DEBHA   (Q6BRZ5    ), H31_ENCCU   (Q8SS77    ), 
H31_HUMAN   (P68431    ), H31_LODEL   (A5DWE2    ), H31_MOUSE   (P68433    ), 
H31_MUSPA   (Q6LBF0    ), H31_PICGU   (A5DFC5    ), H31_PICST   (A3LXD5    ), 
H31_RAT     (Q6LED0    ), H31_SCHPO   (P09988    ), H31_TETPY   (P69149    ), 
H31_TETTH   (P69150    ), H31_USTMA   (Q4P7J7    ), H32_ARATH   (P59226    ), 
H32_ASPOF   (Q6LBE3    ), H32_BOVIN   (P84227    ), H32_BRANA   (Q6LCK1    ), 
H32_CAIMO   (P84230    ), H32_CHICK   (P84229    ), H32_CHLRE   (Q6LCW8    ), 
H32_CICIN   (Q5MYA4    ), H32_CRILO   (Q64400    ), H32_DANRE   (Q4QRF4    ), 
H32_ENCAL   (P08903    ), H32_EUPES   (Q71T45    ), H32_HUMAN   (Q71DI3    ), 
H32_ICTBU   (P84231    ), H32_LILLO   (Q402E1    ), H32_MAIZE   (P69246    ), 
H32_MEDSA   (P68429    ), H32_MOUSE   (P84228    ), H32_MUSPA   (Q6LBE8    ), 
H32_ONCMY   (P84234    ), H32_ONOVI   (P68430    ), H32_ORYSI   (A2Y533    ), 
H32_ORYSJ   (Q2RAD9    ), H32_PEA     (P68427    ), H32_PETCR   (P69248    ), 
H32_PORAF   (P84232    ), H32_TETAM   (P69110    ), H32_TETAU   (P69111    ), 
H32_TETCA   (P69112    ), H32_TETCU   (P69113    ), H32_TETEL   (P69114    ), 
H32_TETFU   (P69115    ), H32_TETHY   (P69116    ), H32_TETLE   (P69117    ), 
H32_TETMA   (P69118    ), H32_TETMI   (P69119    ), H32_TETNA   (P69120    ), 
H32_TETNI   (P69121    ), H32_TETPA   (P69123    ), H32_TETPI   (P69124    ), 
H32_TETPR   (P69122    ), H32_TETRO   (P69125    ), H32_TETSO   (P69126    ), 
H32_TETTR   (P69127    ), H32_TOBAC   (Q76MV0    ), H32_USTMA   (Q4PB04    ), 
H32_WHEAT   (P68428    ), H32_XENLA   (P84233    ), H32_XENTR   (Q28D37    ), 
H331_CAEEL  (Q10453    ), H332_CAEEL  (Q9U281    ), H33A_LILLO  (Q402E2    ), 
H33B_LILLO  (Q2Z2F4    ), H33L3_CAEEL (Q27489    ), H33_ARATH   (P59169    ), 
H33_BOVIN   (Q5E9F8    ), H33_CANAL   (Q5ADQ0    ), H33_CAPAN   (Q6RUR1    ), 
H33_CHICK   (P84247    ), H33_CHLRE   (P50564    ), H33_DANRE   (Q6PI20    ), 
H33_DEBHA   (Q6BMU4    ), H33_DROHY   (P84250    ), H33_DROME   (P84249    ), 
H33_GOSHI   (Q71V89    ), H33_HUMAN   (P84243    ), H33_LODEL   (A5E094    ), 
H33_LOLMU   (Q3C2E5    ), H33_LOLTE   (P69245    ), H33_MEDSA   (P69244    ), 
H33_MOUSE   (P84244    ), H33_ORYCO   (Q71U98    ), H33_ORYSI   (A2XHJ3    ), 
H33_ORYSJ   (Q0JCT1    ), H33_PICGU   (A5DG57    ), H33_PICST   (A3GHN6    ), 
H33_PIG     (Q71LE2    ), H33_PINPS   (Q711T2    ), H33_PONAB   (Q5RCC9    ), 
H33_RABIT   (P84246    ), H33_RAT     (P84245    ), H33_SCHPO   (P10651    ), 
H33_SPISO   (P84248    ), H33_STYLE   (P81197    ), H33_TETPY   (P15512    ), 
H33_TETTS   (P41353    ), H33_TOBAC   (Q76N23    ), H33_TRIPS   (Q8WSF1    ), 
H33_VITVI   (Q71H73    ), H33_XENLA   (Q6PI79    ), H33_XENTR   (Q6P823    ), 
H34_TETTS   (Q22RG7    ), H35_STYLE   (P81199    ), H36_STYLE   (P81200    ), 
H37_STYLE   (P81201    ), H38_STYLE   (P81202    ), H39_STYLE   (P81196    ), 
H3C_BOVIN   (A5PK61    ), H3C_CAIMO   (P06902    ), H3C_HUMAN   (Q6NXT2    ), 
H3C_MOUSE   (P02301    ), H3C_XENLA   (P02302    ), H3L2_LILLO  (Q9XG57    ), 
H3L3_LILLO  (Q2Z2F6    ), H3L5_ARATH  (Q9FKQ3    ), H3_ACRFO    (P22843    ), 
H3_AJECA    (Q9P427    ), H3_ASHGO    (Q757N1    ), H3_ASPCL    (A1CP80    ), 
H3_ASPFU    (P61832    ), H3_ASPNC    (A2QRR5    ), H3_ASPOR    (Q2UCQ0    ), 
H3_ASPTN    (Q0D0E8    ), H3_CAEEL    (P08898    ), H3_CANGA    (P61833    ), 
H3_CHAGB    (Q6DL03    ), H3_CHITH    (P84238    ), H3_COCIM    (Q1E225    ), 
H3_CRYNB    (P0CO05    ), H3_CRYNJ    (P0CO04    ), H3_DERIM    (P69071    ), 
H3_DROHY    (P84236    ), H3_DROME    (P02299    ), H3_EMENI    (P23753    ), 
H3_EUPCR    (P90543    ), H3_GIBZE    (Q4IER8    ), H3_GRIJA    (Q7XYZ0    ), 
H3_HYPJE    (P61835    ), H3_KLULA    (P61831    ), H3_LYTPI    (P69072    ), 
H3_MAGO7    (A4RCX7    ), H3_MARPO    (Q5DWI3    ), H3_MORAP    (Q9HDN1    ), 
H3_NEOFI    (A1D240    ), H3_NEUCR    (P07041    ), H3_PARLI    (P69073    ), 
H3_PHANO    (Q0UY45    ), H3_PISBR    (P69074    ), H3_PISOC    (P69075    ), 
H3_PLADU    (P84235    ), H3_PSAMI    (P69076    ), H3_PYCHE    (P69077    ), 
H3_SOLST    (P69078    ), H3_STRDR    (P69079    ), H3_STRPU    (P06352    ), 
H3_TALFU    (P61834    ), H3_TIGCA    (P84237    ), H3_URECA    (P84239    ), 
H3_VOLCA    (P08437    ), H3_YARLI    (Q6C0C4    ), H3_YEAST    (P61830    ), 
H3_ZYGBA    (P61836    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 13 sequences 

H31_STYLE   (P81195    ), H33B_DICDI  (Q55BN9    ), H33C_DICDI  (Q55BP0    ), 

H33L1_CAEEL (Q27490    ), H33L2_CAEEL (Q27532    ), H34_STYLE   (P81198    ), 
H3CL_BOVIN  (Q3SZB8    ), H3L_ENCCU   (Q8SQP3    ), H3V1_DICDI  (Q54F38    ), 
H3V2_DICDI  (Q54Z07    ), H3_ENTHI    (Q06196    ), H3_LEIIN    (P40285    ), 
H3_MASBA    (Q9U7D1    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 4 sequences 

H32_TETBO   (P17319    ), H33_HORVU   (P06353    ), H3_LITVA    (P83864    ), 

H3_NARPS    (P80553    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

ARHGF_MOUSE (Q5FWH6    ), RSMA_CAMJE  (Q9PLW7    ), RSMA_CAMJR  (Q5HS85    )


				
	

	

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			9 PDB
			


			1KX5; 1PU9; 1PUA; 2KWK; 4GU0; 4GUR; 4GUS; 5DX0; 5J3V
				
	





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