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Entry: PS00330

General information about the entry

Entry name [info] HEMOLYSIN_CALCIUM
Accession [info] PS00330
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-1990 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00293

Name and characterization of the entry

Description [info] Hemolysin-type calcium-binding region signature.
Pattern [info]
D-x-[LI]-x(4)-G-x-D-x-[LI]-x-G-G-x(3)-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 226 in 58 different sequences
Number of true positive hits 226 in 58 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.69 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 17
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
58 sequences

ALGE1_AZOVI (Q44494    ), ALGE2_AZOVI (Q44495    ), ALGE3_AZOVI (Q44496    ), 
ALGE4_AZOVI (Q44493    ), ALGE5_AZOVI (Q44492    ), ALGE6_AZOVI (Q9ZFH0    ), 
ALGE7_AZOVI (Q9ZFG9    ), APRA_PSEAE  (Q03023    ), APRA_PSEE4  (Q1ID47    ), 
APRA_PSEPA  (A0A0C5CJR8), CYAA_BORBR  (Q57506    ), CYAA_BORP1  (J7QLC0    ), 
CYAA_BORPE  (P0DKX7    ), FRPA_NEIMB  (Q9K0K9    ), FRPA_NEIMC  (P55126    ), 
FRPC_NEIMB  (Q9JYV5    ), FRPC_NEIMC  (P55127    ), HLYAC_ECOLX (P09983    ), 
HLYAP_ECOLX (P08715    ), HLYA_ACTSU  (Q00951    ), LIPA_PSEFL  (P26504    ), 
LIPB_PSEFL  (P41773    ), LKA11_MANHA (P55118    ), LKA13_MANHA (Q9EV31    ), 
LKA14_MANHA (Q9EV33    ), LKA16_MANHA (Q9EV32    ), LKA1A_MANHA (P16535    ), 
LKA1B_MANHA (Q7BHI8    ), LKA2A_MANHA (Q9EV30    ), LKA2B_MANHA (P0C081    ), 
LKA2C_MANHA (P0C082    ), LKA2D_MANHA (Q9EV29    ), LKA2E_MANHA (Q9EV27    ), 
LKA7A_MANHA (P0C084    ), LKA7B_MANHA (P0C085    ), LKTA6_MANHA (P0C083    ), 
LKTA8_MANHA (Q9EV34    ), LKTA_BIBTR  (P55117    ), LKTA_MANGL  (Q9ETX2    ), 
LKTA_PASSP  (P55123    ), LTXA_AGGAC  (P16462    ), NODO_RHILV  (P15728    ), 
PAXA_PASAE  (Q9RCG8    ), PRTA1_PHOLU (Q84F70    ), PRTA_DICCH  (Q07295    ), 
PRTA_PHOAZ  (P82115    ), PRTA_PHOLL  (Q7N8R3    ), PRTB_DICCH  (P16316    ), 
PRTC_DICCH  (P16317    ), PRTG_DICCH  (Q07162    ), PRTX_DICCH  (P19144    ), 
PRZN_SERMA  (P23694    ), PRZN_SERME  (P07268    ), RTX11_ACTPL (P55128    ), 
RTX12_ACTPL (P55129    ), RTX2A_ACTPL (P15377    ), RTX31_ACTPL (P55130    ), 
RTX32_ACTPL (P55131    )
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

EGLC_RHIME  (Q9Z3Q2    ), EXSH_RHIME  (O33680    ), ZAPA_PROMI  (Q11137    )

		
PDB
[Detailed view]
25 PDB

1AF0; 1AKL; 1GO7; 1GO8; 1JIW; 1K7G; 1K7I; 1K7Q; 1KAP; 1SAT; 1SMP; 1SRP; 2AGM; 2ML1; 2ML2; 2ML3; 3HB2; 3HBU; 3HBV; 3HDA; 3VI1; 4I35; 5CVW; 5CXL; 5D7W
» more

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