Entry: PS00332

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General information about the entry

Entry name [info] SOD_CU_ZN_2
Accession [info] PS00332
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00082

Name and characterization of the entry

Description [info] Copper/Zinc superoxide dismutase signature 2.
Pattern [info]
G-[GNHD]-[SGA]-[GR]-x-R-x-[SGAWRV]-C-x(2)-[IV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 161 in 161 different sequences
Number of true positive hits 159 in 159 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 9
Number of 'partial' sequences 18
Precision (true positives / (true positives + false positives)) 98.76 %
Recall (true positives / (true positives + false negatives)) 94.64 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] disulfide at position 9
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
159 sequences

ALL5B_OLEEU (Q8L5E0), CCS_HUMAN   (O14618), CCS_MOUSE   (Q9WU84), 
CCS_PIG     (Q6PWT7), CCS_RAT     (Q9JK72), SOD1A_XENLA (P13926), 
SOD1B_XENLA (P15107), SODC1_AQUAE (O67149), SODC1_ARATH (P24704), 
SODC1_BRAJU (Q42611), SODC1_DEBHA (O42724), SODC1_MESCR (P93258), 
SODC1_ORYSI (A2XGP6), SODC1_ORYSJ (Q0DRV6), SODC1_SALT4 (E8XDJ8), 
SODC1_SALTY (P0CW86), SODC1_SOLLC (P14830), SODC2_AQUAE (O66602), 
SODC2_ARATH (O78310), SODC2_BRAJU (Q42612), SODC2_MAIZE (P11428), 
SODC2_MESCR (O49044), SODC2_ORYSJ (P28757), SODC2_SOLLC (Q43779), 
SODC3_ARATH (Q9FK60), SODC4_MAIZE (P23345), SODC5_DICDI (Q54G70), 
SODC5_MAIZE (P23346), SODC6_DICDI (Q54TW8), SODCP_MEDSA (O65198), 
SODCP_ORYSJ (P93407), SODCP_PEA   (P11964), SODCP_PETHY (P10792), 
SODCP_PINSY (P24707), SODCP_POPTM (P36214), SODCP_SOLCS (O04997), 
SODCP_SOLLC (P14831), SODCP_SPIOL (P07505), SODCP_VITVI (O65199), 
SODCP_ZANAE (O65175), SODC_ACTPL  (P24702), SODC_ANACO  (Q9SQL5), 
SODC_ASHGO  (Q751L8), SODC_ASPFL  (Q8X1S6), SODC_ASPFU  (Q9Y8D9), 
SODC_ASPNC  (A2QMY6), SODC_ASPNG  (P85978), SODC_ASPOR  (Q877B5), 
SODC_BOMMO  (P82205), SODC_BOSMU  (Q52RN5), SODC_BOTFU  (Q70Q35), 
SODC_BOVIN  (P00442), SODC_BRAOC  (P09678), SODC_BRUAB  (P15453), 
SODC_BRUME  (P66826), SODC_BRUPA  (P41962), SODC_BRUSU  (P66827), 
SODC_CAEBR  (A8XCP3), SODC_CAEEL  (P34697), SODC_CALJA  (Q8HXP8), 
SODC_CANAX  (O59924), SODC_CANFA  (Q8WNN6), SODC_CANGA  (Q6FWL5), 
SODC_CAPAN  (O22373), SODC_CARCR  (P80174), SODC_CARPA  (O65768), 
SODC_CAUCR  (P20379), SODC_CAVPO  (P33431), SODC_CEBAP  (Q8HXP9), 
SODC_CERCA  (P28755), SODC_CEREL  (O46412), SODC_CHICK  (P80566), 
SODC_CHYAM  (Q07182), SODC_CLAP2  (Q96VL0), SODC_COLGL  (O94178), 
SODC_CORMI  (Q8J0N2), SODC_CRYGA  (Q9C0N4), SODC_DANRE  (O73872), 
SODC_DROBS  (P54407), SODC_DROER  (Q9U4X4), SODC_DROMA  (P61853), 
SODC_DROME  (P61851), SODC_DROOR  (Q9U4X5), SODC_DROPS  (Q95086), 
SODC_DROSE  (P61854), SODC_DROSI  (P61852), SODC_DROTE  (Q9U4X2), 
SODC_DROVI  (P10791), SODC_DROWI  (P41973), SODC_DROYA  (Q9U4X3), 
SODC_ECO57  (P0AGD2), SODC_ECOLI  (P0AGD1), SODC_EMENI  (Q9HEY7), 
SODC_FRATH  (Q59448), SODC_HAEDU  (Q59452), SODC_HAEIF  (P25841), 
SODC_HAEPA  (P25842), SODC_HALRO  (P81926), SODC_HORSE  (P00443), 
SODC_HUMAN  (P00441), SODC_HUMLT  (P83684), SODC_HYLLA  (Q8HXQ3), 
SODC_IPOBA  (Q07796), SODC_ISATE  (Q8J0N3), SODC_KLULA  (Q6CPE2), 
SODC_LEGPH  (Q5ZT17), SODC_LEGPN  (P69049), SODC_MACFA  (Q8HXQ1), 
SODC_MACFU  (Q8HXQ2), SODC_MACMU  (Q8HXQ0), SODC_MOUSE  (P08228), 
SODC_MYCBO  (P0A609), SODC_MYCLE  (Q9CBI6), SODC_MYCPA  (Q9AGW2), 
SODC_MYCTO  (P9WGE8), SODC_MYCTU  (P9WGE9), SODC_NEIMA  (P57005), 
SODC_NEIMB  (Q59623), SODC_NEUCR  (P07509), SODC_NICPL  (P27082), 
SODC_NPVAC  (P24705), SODC_NPVOP  (O12933), SODC_ONCVO  (P24706), 
SODC_PAESI  (Q6T3B0), SODC_PANGI  (O22668), SODC_PANTR  (P60052), 
SODC_PASMU  (Q59689), SODC_PBCV1  (Q90023), SODC_PEA    (Q02610), 
SODC_PHOLE  (P00446), SODC_PIG    (P04178), SODC_PINSY  (P24669), 
SODC_PODAS  (Q711T9), SODC_PONPY  (Q8HXQ4), SODC_PRIGL  (P11418), 
SODC_RABIT  (P09212), SODC_RAT    (P07632), SODC_SALTY  (O68901), 
SODC_SCHMA  (Q01137), SODC_SCHPO  (P28758), SODC_SHEEP  (P09670), 
SODC_SOLCS  (O04996), SODC_SOYBN  (Q7M1R5), SODC_SPIOL  (P22233), 
SODC_XENTR  (Q0IIW3), SODC_XIPGL  (P03946), SODC_YARLI  (Q6C662), 
SODC_YEAST  (P00445), SODC_ZANAE  (O65174), SODE_BRUPA  (P41963), 
SODE_CAEEL  (P34461), SODE_DIRIM  (P41974), SODE_HAECO  (P51547), 
SODE_HUMAN  (P08294), SODE_MOUSE  (O09164), SODE_ONCVO  (Q07449), 
SODE_RABIT  (P41975), SODE_RAT    (Q08420), SODE_SCHMA  (P16026)
» More

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

CCS1_DEBHA  (Q6BK66), CCS_DICDI   (Q54F73), SODC2_DICDI (Q54RN1), 
SODC3_DICDI (Q54RQ1), SODC_ASPJA  (Q12548), SODC_DEIRA  (Q9RU48), 
SODC_HAECO  (Q27666), SODC_PAUKA  (O49073), YOJM_BACSU  (O31851)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
18 sequences

ALL5A_OLEEU (P80740), SODC2_DEBHN (P82902), SODC2_PICAB (P29428), 
SODCP_PICAB (P29427), SODCP_PINPS (P81082), SODC_AGGAC  (Q59081), 
SODC_DROMD  (Q95081), SODC_DROMI  (Q95079), SODC_DROOB  (Q95085), 
SODC_DROPB  (Q95087), SODC_DROPE  (Q95088), SODC_DROTO  (Q95095), 
SODC_HORVU  (P34936), SODC_LAMCR  (P81036), SODC_LITCT  (P23417), 
SODC_PAROL  (P83129), SODC_PASHA  (Q51853), SODC_STRHE  (P81163)
» More

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

BURS_PERAM  (P84118), STT3A_ORYSJ (Q6F2Z1)

		
PDB
[Detailed view]
136 PDB

1AZV; 1B4L; 1B4T; 1BA9; 1BZO; 1CB4; 1CBJ; 1COB; 1DO5; 1DSW; 1E9O; 1E9P; 1E9Q; 1EQW; 1ESO; 1F18; 1F1A; 1F1D; 1F1G; 1FUN; 1HL4; 1HL5; 1IB5; 1IBB; 1IBD; 1IBF; 1IBH; 1JCV; 1JK9; 1KMG; 1L3N; 1MFM; 1N18; 1N19; 1OAJ; 1OAL; 1OZT; 1OZU; 1P1V; 1PTZ; 1PU0; 1PZS; 1Q0E; 1RK7; 1SDA; 1SDY; 1SOS; 1SPD; 1SRD; 1SXA; 1SXB; 1SXC; 1SXN; 1SXS; 1SXZ; 1TO4; 1TO5; 1UXL; 1UXM; 1XSO; 1YAI; 1YAZ; 1YSO; 1Z9N; 1Z9P; 2AEO; 2AF2; 2APS; 2AQN; 2AQP; 2AQQ; 2AQR; 2AQS; 2AQT; 2C9S; 2C9U; 2C9V; 2GBT; 2JCW; 2JLP; 2LU5; 2NNX; 2SOD; 2V0A; 2VR6; 2VR7; 2VR8; 2WKO; 2WYT; 2WYZ; 2WZ0; 2WZ5; 2WZ6; 2XJK; 2XJL; 2Z7U; 2Z7W; 2Z7Y; 2Z7Z; 2ZKW; 2ZKX; 2ZKY; 2ZOW; 3CQP; 3ECU; 3ECV; 3ECW; 3GQF; 3GTT; 3GTV; 3GZO; 3GZP; 3HW7; 3K91; 3KBE; 3KBF; 3KH3; 3KH4; 3KM2; 3L9E; 3L9Y; 3LTV; 3PU7; 3RE0; 3SOD; 3T5W; 4A7G; 4A7Q; 4A7S; 4A7T; 4A7U; 4A7V; 4B3E; 4BCY; 4FF9; 4L05
» More

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