Entry: PS00332

General information about the entry

Entry name [info] SOD_CU_ZN_2
Accession [info] PS00332
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00082

Name and characterization of the entry

Description [info] Copper/Zinc superoxide dismutase signature 2.
Pattern [info]
G-[GNHD]-[SGA]-[GR]-x-R-x-[SGAWRV]-C-x(2)-[IV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 161 in 161 different sequences
Number of true positive hits 159 in 159 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 9
Number of 'partial' sequences 18
Precision (true positives / (true positives + false positives)) 98.76 %
Recall (true positives / (true positives + false negatives)) 94.64 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] disulfide at position 9
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
159 sequences

ALL5B_OLEEU (Q8L5E0), CCS_HUMAN   (O14618), CCS_MOUSE   (Q9WU84), 
CCS_PIG     (Q6PWT7), CCS_RAT     (Q9JK72), SOD1A_XENLA (P13926), 
SOD1B_XENLA (P15107), SODC1_AQUAE (O67149), SODC1_ARATH (P24704), 
SODC1_BRAJU (Q42611), SODC1_DEBHA (O42724), SODC1_MESCR (P93258), 
SODC1_ORYSI (A2XGP6), SODC1_ORYSJ (Q0DRV6), SODC1_SALT4 (E8XDJ8), 
SODC1_SALTY (P0CW86), SODC1_SOLLC (P14830), SODC2_AQUAE (O66602), 
SODC2_ARATH (O78310), SODC2_BRAJU (Q42612), SODC2_MAIZE (P11428), 
SODC2_MESCR (O49044), SODC2_ORYSJ (P28757), SODC2_SOLLC (Q43779), 
SODC3_ARATH (Q9FK60), SODC4_MAIZE (P23345), SODC5_DICDI (Q54G70), 
SODC5_MAIZE (P23346), SODC6_DICDI (Q54TW8), SODCP_MEDSA (O65198), 
SODCP_ORYSJ (P93407), SODCP_PEA   (P11964), SODCP_PETHY (P10792), 
SODCP_PINSY (P24707), SODCP_POPTM (P36214), SODCP_SOLCS (O04997), 
SODCP_SOLLC (P14831), SODCP_SPIOL (P07505), SODCP_VITVI (O65199), 
SODCP_ZANAE (O65175), SODC_ACTPL  (P24702), SODC_ANACO  (Q9SQL5), 
SODC_ASHGO  (Q751L8), SODC_ASPFL  (Q8X1S6), SODC_ASPFU  (Q9Y8D9), 
SODC_ASPNC  (A2QMY6), SODC_ASPNG  (P85978), SODC_ASPOR  (Q877B5), 
SODC_BOMMO  (P82205), SODC_BOSMU  (Q52RN5), SODC_BOTFU  (Q70Q35), 
SODC_BOVIN  (P00442), SODC_BRAOC  (P09678), SODC_BRUAB  (P15453), 
SODC_BRUME  (P66826), SODC_BRUPA  (P41962), SODC_BRUSU  (P66827), 
SODC_CAEBR  (A8XCP3), SODC_CAEEL  (P34697), SODC_CALJA  (Q8HXP8), 
SODC_CANAX  (O59924), SODC_CANFA  (Q8WNN6), SODC_CANGA  (Q6FWL5), 
SODC_CAPAN  (O22373), SODC_CARCR  (P80174), SODC_CARPA  (O65768), 
SODC_CAUCR  (P20379), SODC_CAVPO  (P33431), SODC_CERCA  (P28755), 
SODC_CEREL  (O46412), SODC_CHICK  (P80566), SODC_CHYAM  (Q07182), 
SODC_CLAP2  (Q96VL0), SODC_COLGL  (O94178), SODC_CORMI  (Q8J0N2), 
SODC_CRYGA  (Q9C0N4), SODC_DANRE  (O73872), SODC_DROBS  (P54407), 
SODC_DROER  (Q9U4X4), SODC_DROMA  (P61853), SODC_DROME  (P61851), 
SODC_DROOR  (Q9U4X5), SODC_DROPS  (Q95086), SODC_DROSE  (P61854), 
SODC_DROSI  (P61852), SODC_DROTE  (Q9U4X2), SODC_DROVI  (P10791), 
SODC_DROWI  (P41973), SODC_DROYA  (Q9U4X3), SODC_ECO57  (P0AGD2), 
SODC_ECOLI  (P0AGD1), SODC_EMENI  (Q9HEY7), SODC_FRATH  (Q59448), 
SODC_HAEDU  (Q59452), SODC_HAEIF  (P25841), SODC_HAEPA  (P25842), 
SODC_HALRO  (P81926), SODC_HORSE  (P00443), SODC_HUMAN  (P00441), 
SODC_HUMLT  (P83684), SODC_HYLLA  (Q8HXQ3), SODC_IPOBA  (Q07796), 
SODC_ISATE  (Q8J0N3), SODC_KLULA  (Q6CPE2), SODC_LEGPH  (Q5ZT17), 
SODC_LEGPN  (P69049), SODC_MACFA  (Q8HXQ1), SODC_MACFU  (Q8HXQ2), 
SODC_MACMU  (Q8HXQ0), SODC_MOUSE  (P08228), SODC_MYCBO  (P0A609), 
SODC_MYCLE  (Q9CBI6), SODC_MYCPA  (Q9AGW2), SODC_MYCTO  (P9WGE8), 
SODC_MYCTU  (P9WGE9), SODC_NEIMA  (P57005), SODC_NEIMB  (Q59623), 
SODC_NEUCR  (P07509), SODC_NICPL  (P27082), SODC_NPVAC  (P24705), 
SODC_NPVOP  (O12933), SODC_ONCVO  (P24706), SODC_PAESI  (Q6T3B0), 
SODC_PANGI  (O22668), SODC_PANTR  (P60052), SODC_PASMU  (Q59689), 
SODC_PBCV1  (Q90023), SODC_PEA    (Q02610), SODC_PHOLE  (P00446), 
SODC_PIG    (P04178), SODC_PINSY  (P24669), SODC_PODAS  (Q711T9), 
SODC_PONPY  (Q8HXQ4), SODC_PRIGL  (P11418), SODC_RABIT  (P09212), 
SODC_RAT    (P07632), SODC_SALTY  (O68901), SODC_SAPAP  (Q8HXP9), 
SODC_SCHMA  (Q01137), SODC_SCHPO  (P28758), SODC_SHEEP  (P09670), 
SODC_SOLCS  (O04996), SODC_SOYBN  (Q7M1R5), SODC_SPIOL  (P22233), 
SODC_XENTR  (Q0IIW3), SODC_XIPGL  (P03946), SODC_YARLI  (Q6C662), 
SODC_YEAST  (P00445), SODC_ZANAE  (O65174), SODE_BRUPA  (P41963), 
SODE_CAEEL  (P34461), SODE_DIRIM  (P41974), SODE_HAECO  (P51547), 
SODE_HUMAN  (P08294), SODE_MOUSE  (O09164), SODE_ONCVO  (Q07449), 
SODE_RABIT  (P41975), SODE_RAT    (Q08420), SODE_SCHMA  (P16026)
» More

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

CCS1_DEBHA  (Q6BK66), CCS_DICDI   (Q54F73), SODC2_DICDI (Q54RN1), 
SODC3_DICDI (Q54RQ1), SODC_ASPJA  (Q12548), SODC_DEIRA  (Q9RU48), 
SODC_HAECO  (Q27666), SODC_PAUKA  (O49073), YOJM_BACSU  (O31851)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
18 sequences

ALL5A_OLEEU (P80740), SODC2_DEBHN (P82902), SODC2_PICAB (P29428), 
SODCP_PICAB (P29427), SODCP_PINPS (P81082), SODC_AGGAC  (Q59081), 
SODC_DROMD  (Q95081), SODC_DROMI  (Q95079), SODC_DROOB  (Q95085), 
SODC_DROPB  (Q95087), SODC_DROPE  (Q95088), SODC_DROTO  (Q95095), 
SODC_HORVU  (P34936), SODC_LAMCR  (P81036), SODC_LITCT  (P23417), 
SODC_MANHA  (Q51853), SODC_PAROL  (P83129), SODC_STRHE  (P81163)
» More

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

BURS_PERAM  (P84118), STT3A_ORYSJ (Q6F2Z1)

		
PDB
[Detailed view]
137 PDB

1AZV; 1B4L; 1B4T; 1BA9; 1BZO; 1CB4; 1CBJ; 1COB; 1DO5; 1DSW; 1E9O; 1E9P; 1E9Q; 1EQW; 1ESO; 1F18; 1F1A; 1F1D; 1F1G; 1FUN; 1HL4; 1HL5; 1IB5; 1IBB; 1IBD; 1IBF; 1IBH; 1JCV; 1JK9; 1KMG; 1L3N; 1MFM; 1N18; 1N19; 1OAJ; 1OAL; 1OZT; 1OZU; 1P1V; 1PTZ; 1PU0; 1PZS; 1Q0E; 1RK7; 1SDA; 1SDY; 1SOS; 1SPD; 1SRD; 1SXA; 1SXB; 1SXC; 1SXN; 1SXS; 1SXZ; 1TO4; 1TO5; 1UXL; 1UXM; 1XSO; 1YAI; 1YAZ; 1YSO; 1Z9N; 1Z9P; 2AEO; 2AF2; 2APS; 2AQN; 2AQP; 2AQQ; 2AQR; 2AQS; 2AQT; 2C9S; 2C9U; 2C9V; 2GBT; 2JCW; 2JLP; 2LU5; 2NNX; 2SOD; 2V0A; 2VR6; 2VR7; 2VR8; 2WKO; 2WYT; 2WYZ; 2WZ0; 2WZ5; 2WZ6; 2XJK; 2XJL; 2Z7U; 2Z7W; 2Z7Y; 2Z7Z; 2ZKW; 2ZKX; 2ZKY; 2ZOW; 3CQP; 3ECU; 3ECV; 3ECW; 3GQF; 3GTT; 3GTV; 3GZO; 3GZP; 3HW7; 3K91; 3KBE; 3KBF; 3KH3; 3KH4; 3KM2; 3L9E; 3L9Y; 3LTV; 3PU7; 3RE0; 3SOD; 3T5W; 4A7G; 4A7Q; 4A7S; 4A7T; 4A7U; 4A7V; 4B3E; 4BCY; 4FF9; 4L05; 4MCM
» More

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