PROSITE entry PS00347
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General information about the entry
Entry name [info] | ZF_PARP_1 |
Accession [info] | PS00347 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1990 CREATED;
01-APR-2006 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00360 |
Name and characterization of the entry
Description [info] | Zinc finger poly(ADP-ribose) polymerase (PARP)-type signature. |
Pattern [info] |
C-[KR]-x-C-x(3)-I-x-[KAL]-x(3)-[RG]-x(16,18)-W-[FYH]-H-x(2)-C. |
Numerical results [info]
Total number of hits | 21 in 13 different sequences |
Number of true positive hits | 21 in 13 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 6 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 77.78 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 2 |
Site [info] | zinc(?) at position 1 |
Site [info] | zinc(?) at position 4 |
Site [info] | zinc(?) at position 14 |
Site [info] | zinc(?) at position 16 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
13 sequences
DNLI3_HUMAN (P49916), DNLI3_MOUSE (P97386), PARP1_BOVIN (P18493), PARP1_CAEEL (Q9N4H4), PARP1_CHICK (P26446), PARP1_CRIGR (Q9R152), PARP1_DANRE (Q5RHR0), PARP1_HUMAN (P09874), PARP1_MOUSE (P11103), PARP1_RAT (P27008), PARP1_XENLA (P31669), PARP_DROME (P35875), PARP_SARPE (Q11208)» more
|
UniProtKB/Swiss-Prot False negative sequences |
6 sequences
PARP1_ARATH (Q9ZP54), PARP1_MAIZE (Q9ZSV1), PARP1_ORYSJ (Q7EYV7), YEU7_SCHPO (O13706), YGI7_SCHPO (Q9Y7K9), ZDP_ARATH (Q84JE8)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
PARP1_ONCMA (Q08824) |
PDB [Detailed view] |
19 PDB
1UW0; 2CS2; 2DMJ; 2L30; 2L31; 2N8A; 3OD8; 3ODA; 3ODC; 3ODE; 4AV1; 4DQY; 4OPX; 4OQA; 4OQB; 7S68; 7S6H; 7S6M; 7S81 » more |