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Entry: PS00347
General information about the entry
Entry namePARP_ZN_FINGER_1
Accession numberPS00347
Entry typePATTERN
DateNOV-1990 (CREATED); APR-2006 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00360
Name and characterization of the entry
DescriptionPoly(ADP-ribose) polymerase zinc finger domain signature.
PatternC-[KR]-x-C-x(3)-I-x-[KAL]-x(3)-[RG]-x(16,18)-W-[FYH]-H-x(2)-C.
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 19 hits in 12 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 19 hits in 12 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 2
  • `Interesting' site in the pattern: 1,zinc(?)
  • `Interesting' site in the pattern: 4,zinc(?)
  • `Interesting' site in the pattern: 14,zinc(?)
  • `Interesting' site in the pattern: 16,zinc(?)
  • VERSION: 2
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
DNLI3_HUMAN (P49916), DNLI3_MOUSE (P97386), PARP1_BOVIN (P18493), 
PARP1_CHICK (P26446), PARP1_CRIGR (Q9R152), PARP1_HUMAN (P09874), 
PARP1_MOUSE (P11103), PARP1_RAT   (P27008), PARP1_XENLA (P31669), 
PARP_DROME  (P35875), PARP_SARPE  (Q11208), PME1_CAEEL  (Q9N4H4)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
PARP1_ONCMA (Q08824)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		1UW0; 2CS2; 2DMJ; 2L30; 2L31; 3OD8; 3ODA; 3ODC; 3ODE;

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