Entry: PS00364

General information about the entry

Entry name [info] BACTERIAL_PQQ_2
Accession [info] PS00364
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED; 01-DEC-2004 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00375

Name and characterization of the entry

Description [info] Bacterial quinoprotein dehydrogenases signature 2.
Pattern [info] 
W-x(4)-[YF]-D-x(3)-[DN]-[LIVMFYT]-[LIVMFY](3)-x(2)-G-x(2)-[STAG]-[PVT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 18 in 18 different sequences
Number of true positive hits 18 in 18 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 81.82 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 18 sequences 

DHET_ACEAC  (P18278    ), DHET_GLUOX  (O05542    ), DHET_GLUPO  (P28036    ), 

DHET_KOMEU  (Q44002    ), DHGA_ACICA  (P05465    ), DHG_ECOLI   (P15877    ), 
DHG_GLUOX   (P27175    ), DHM1_METEA  (P16027    ), DHM1_METME  (P38539    ), 
DHM1_METOR  (P15279    ), DHM1_PARDE  (P12293    ), EXAA_PSEAE  (Q9Z4J7    ), 
QEDH_PSEPU  (A8R3S4    ), QHED_COMTE  (Q46444    ), QHED_PSEPU  (Q8GR64    ), 
QUIA_ACIAD  (Q59086    ), QUIA_XANCJ  (Q9XD78    ), XOXF_PARDE  (P29968    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 4 sequences 

PVADH_PSESP (P77931    ), QGDA_PSEPU  (Q4W6G0    ), SLDA_GLUOX  (Q70JN9    ), 

SLDA_GLUTH  (Q8KIL1    )
» more

PDB
[Detailed view]		 12 PDB

1FLG; 1G72; 1H4I; 1H4J; 1KB0; 1KV9; 1LRW; 1W6S; 2AD6; 2AD7; 2AD8; 4AAH

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