Entry: PS00364

Forthcoming changes to the profile format
General information about the entry

Entry name [info] BACTERIAL_PQQ_2
Accession [info] PS00364
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); DEC-2004 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00375

Name and characterization of the entry

Description [info] Bacterial quinoprotein dehydrogenases signature 2.
Pattern [info]
W-x(4)-[YF]-D-x(3)-[DN]-[LIVMFYT]-[LIVMFY](3)-x(2)-G-x(2)-[STAG]-[PVT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 18 in 18 different sequences
Number of true positive hits 18 in 18 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 81.82 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
18 sequences

DHET_ACEAC  (P18278), DHET_GLUOX  (O05542), DHET_GLUPO  (P28036), 
DHET_KOMEU  (Q44002), DHGA_ACICA  (P05465), DHG_ECOLI   (P15877), 
DHG_GLUOX   (P27175), DHM1_METEA  (P16027), DHM1_METME  (P38539), 
DHM1_METOR  (P15279), DHM1_PARDE  (P12293), EXAA_PSEAE  (Q9Z4J7), 
QEDH_PSEPU  (A8R3S4), QHED_COMTE  (Q46444), QHED_PSEPU  (Q8GR64), 
QUIA_ACIAD  (Q59086), QUIA_XANCJ  (Q9XD78), XOXF_PARDE  (P29968)
» More

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

PVADH_PSESP (P77931), QGDA_PSEPU  (Q4W6G0), SLDA_GLUOX  (Q70JN9), 
SLDA_GLUTH  (Q8KIL1)
» More

PDB
[Detailed view]
12 PDB

1FLG; 1G72; 1H4I; 1H4J; 1KB0; 1KV9; 1LRW; 1W6S; 2AD6; 2AD7; 2AD8; 4AAH

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission