Entry: PS00365

General information about the entry

Entry name [info] NIR_SIR
Accession [info] PS00365
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); APR-2006 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00314

Name and characterization of the entry

Description [info] Nitrite and sulfite reductases iron-sulfur/siroheme-binding site.
Pattern [info]
[STVN]-G-C-x(3)-C-x(6)-[DE]-[LIVMF]-[GAT]-[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 206 in 205 different sequences
Number of true positive hits 205 in 204 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 8
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.51 %
Recall (true positives / (true positives + false negatives)) 96.24 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] iron_sulfur at position 3
Site [info] iron_sulfur/siroheme at position 5
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
204 sequences

ASRC_SALTI  (P0A1Y3), ASRC_SALTY  (P0A1Y2), CBIH_BACME  (O87689), 
COBG_PSEDE  (P21637), CYSI1_KLEP3 (B5XV25), CYSI1_PECCP (C6DCZ7), 
CYSI2_KLEP3 (B5Y1B5), CYSI2_PECCP (C6DDH3), CYSI_ACIF2  (B7JAM6), 
CYSI_ACIF5  (B5EQW2), CYSI_ACTP2  (A3N3D8), CYSI_ACTP7  (B3GZ95), 
CYSI_ACTPJ  (B0BT17), CYSI_ACTPL  (Q8VSR0), CYSI_ACTSZ  (A6VPZ1), 
CYSI_AERHH  (A0KNL0), CYSI_ALISL  (B6ELM5), CYSI_ALTMD  (B4RYS6), 
CYSI_ANOFW  (B7GJU8), CYSI_BACA2  (A7Z8R5), CYSI_BACHD  (Q9KF75), 
CYSI_BACLD  (Q65L57), CYSI_BACP2  (A8FDY3), CYSI_BACSU  (O32213), 
CYSI_BAUCH  (Q1LTP2), CYSI_BLOFL  (Q7VQH1), CYSI_BLOPB  (Q493N3), 
CYSI_BORPD  (A9IT77), CYSI_BUCA5  (B8D9K5), CYSI_BUCAI  (P57502), 
CYSI_BUCAP  (P0C0B2), CYSI_BUCAT  (B8D7V7), CYSI_CHRSD  (Q1QU16), 
CYSI_CITK8  (A8ANX0), CYSI_COLP3  (Q47UW8), CYSI_CROS8  (A7MJ64), 
CYSI_DICDC  (C6CAW9), CYSI_DICZE  (C6CLS0), CYSI_ECO24  (A7ZQK6), 
CYSI_ECO27  (B7UHH5), CYSI_ECO45  (B7MKN0), CYSI_ECO55  (B7LEI2), 
CYSI_ECO57  (Q8X7U2), CYSI_ECO5E  (B5Z3C6), CYSI_ECO7I  (B7NTA0), 
CYSI_ECO81  (B7MYR1), CYSI_ECO8A  (B7LXH6), CYSI_ECOBD  (C5W865), 
CYSI_ECOBR  (C6UCN7), CYSI_ECOBW  (C4ZZR7), CYSI_ECOHS  (A8A3P4), 
CYSI_ECOK1  (A1AEU9), CYSI_ECOL5  (Q0TEA3), CYSI_ECOL6  (Q8FEI8), 
CYSI_ECOLC  (B1IU78), CYSI_ECOLI  (P17846), CYSI_ECOLU  (B7N6Z7), 
CYSI_ECOSE  (B6I6F7), CYSI_ECOSM  (B1LQ86), CYSI_ECOUT  (Q1R7T5), 
CYSI_ENT38  (A4WDW0), CYSI_ERWT9  (B2VG06), CYSI_ESCF3  (B7LWN9), 
CYSI_GEOKA  (Q5L041), CYSI_GEOTN  (A4IMT6), CYSI_KLEP7  (A6TD48), 
CYSI_LEPBA  (B0SF75), CYSI_LEPBP  (B0SNL6), CYSI_LYSSC  (B1HXC1), 
CYSI_MANSM  (Q65T54), CYSI_METC4  (B7L0Y4), CYSI_METEA  (C5APZ1), 
CYSI_METEP  (A9W4X6), CYSI_METNO  (B8IRY2), CYSI_METPB  (B1Z7C5), 
CYSI_METRJ  (B1LS97), CYSI_METS4  (B0U8Y9), CYSI_METSB  (B8EKI5), 
CYSI_MYXXD  (Q1D9W9), CYSI_NEIM0  (A9LZ72), CYSI_NEIMA  (Q9JUD9), 
CYSI_NEIMB  (Q9JS33), CYSI_NEIMF  (A1KU05), CYSI_NITEC  (Q0AGU3), 
CYSI_NITEU  (Q82W45), CYSI_NITHX  (Q1QQC7), CYSI_NITOC  (Q3JBJ1), 
CYSI_NITWN  (Q3SV33), CYSI_OCEIH  (Q8EQP0), CYSI_OLICO  (B6JCW3), 
CYSI_PECAS  (Q6D1A2), CYSI_PHOLL  (Q7N8L5), CYSI_PHOPR  (Q6LM59), 
CYSI_PROMH  (B4F234), CYSI_PSEA6  (Q15NK1), CYSI_PSYIN  (A1T054), 
CYSI_SALA4  (B5F430), CYSI_SALAR  (A9MF17), CYSI_SALCH  (Q57KH8), 
CYSI_SALDC  (B5FTU2), CYSI_SALEP  (B5QW35), CYSI_SALG2  (B5RDS0), 
CYSI_SALHS  (B4TFY4), CYSI_SALNS  (B4T474), CYSI_SALPA  (Q5PEH8), 
CYSI_SALPB  (A9N2E5), CYSI_SALPC  (C0PXC5), CYSI_SALPK  (B5BEZ8), 
CYSI_SALSV  (B4TTX8), CYSI_SALTI  (Q8Z459), CYSI_SALTY  (P17845), 
CYSI_SERP5  (A8G9X7), CYSI_SHEB2  (B8EE51), CYSI_SHEB5  (A3D829), 
CYSI_SHEB8  (A6WJT5), CYSI_SHEB9  (A9L2P8), CYSI_SHEDO  (Q12QQ5), 
CYSI_SHEFN  (Q07Y86), CYSI_SHEHH  (B0TTE4), CYSI_SHELP  (A3QAP0), 
CYSI_SHEON  (Q8EB00), CYSI_SHEPA  (A8H094), CYSI_SHEPC  (A4Y9Z3), 
CYSI_SHEPW  (B8CJV9), CYSI_SHESA  (A0KTH5), CYSI_SHESH  (A8FZY7), 
CYSI_SHESM  (Q0HFL7), CYSI_SHESR  (Q0HYB3), CYSI_SHESW  (A1RGD7), 
CYSI_SHEWM  (B1KE86), CYSI_SHIB3  (B2TZH1), CYSI_SHIBS  (Q31XM5), 
CYSI_SHIDS  (Q32CG4), CYSI_SHIF8  (Q0T1I7), CYSI_SHIFL  (Q83QE0), 
CYSI_SHISS  (Q3YY95), CYSI_SODGM  (Q2NVN3), CYSI_STAEQ  (Q5HKZ7), 
CYSI_STAES  (Q8CMX5), CYSI_STAHJ  (Q4L9F1), CYSI_STAS1  (Q49UL9), 
CYSI_THIRO  (P52673), CYSI_TOLAT  (C4L9J8), CYSI_VIBC3  (A5F3I5), 
CYSI_VIBCB  (A7MSZ7), CYSI_VIBCH  (Q9KUX3), CYSI_VIBCM  (C3LRB7), 
CYSI_VIBF1  (Q5E840), CYSI_VIBFM  (B5FGI9), CYSI_VIBPA  (Q87L91), 
CYSI_VIBTL  (B7VI85), CYSI_VIBVU  (Q8DCK1), CYSI_VIBVY  (Q7MHA6), 
CYSI_XANAC  (Q8PHC8), CYSI_XANC5  (Q3BPY4), CYSI_XANC8  (Q4UY08), 
CYSI_XANCB  (B0RPG6), CYSI_XANCP  (Q8P608), CYSI_XANOM  (Q2P0H2), 
CYSI_XANOP  (B2SI05), CYSI_XANOR  (Q8KQT8), CYSI_XYLF2  (B2IA31), 
CYSI_XYLFA  (Q9PD81), CYSI_XYLFM  (B0U6W0), CYSI_XYLFT  (Q87DH0), 
CYSI_YERE8  (A1JJS3), CYSI_YERP3  (A7FLY9), CYSI_YERPA  (Q1C3Z1), 
CYSI_YERPB  (B2K566), CYSI_YERPE  (Q8ZBN7), CYSI_YERPN  (Q1CLS7), 
CYSI_YERPP  (A4TPY6), CYSI_YERPS  (Q66ED3), CYSI_YERPY  (B1JK04), 
CYSI_ZYMMO  (Q5NRM2), MET5_YEAST  (P47169), NASD_HALMT  (I3R637), 
NIRB_ECOLI  (P08201), NIRB_KLEOX  (Q06458), NIR_ARATH   (Q39161), 
NIR_BETPN   (P38500), NIR_EMENI   (P22944), NIR_MAIZE   (P17847), 
NIR_NEUCR   (P38681), NIR_ORYSJ   (Q42997), NIR_PHOLA   (Q51879), 
NIR_PINSY   (Q43090), NIR_SPIOL   (P05314), NIR_SYNE7   (P39661), 
SIR1_MYCPA  (Q73YC1), SIR1_TOBAC  (O82802), SIR2_MYCPA  (Q73XV0), 
SIR_ARATH   (Q9LZ66), SIR_DESVH   (Q05805), SIR_MAIZE   (O23813), 
SIR_MYCBO   (Q7TYP6), SIR_MYCTO   (P9WJ02), SIR_MYCTU   (P9WJ03), 
SIR_PEA     (Q75NZ0), SIR_SOYBN   (Q9AWB2), SIR_SYNE7   (P30008), 
SIR_SYNY3   (P72854), Y551_METJA  (Q57971), Y870_METJA  (Q58280)
» More

UniProtKB/Swiss-Prot
False negative sequences
8 sequences

CYSI_BACSK  (Q5WKE7), CYSI_BREBN  (C0Z9X2), CYSI_PAESJ  (C6CXN6), 
CYSI_PSEHT  (Q3IFM1), CYSI_SHEAM  (A1S9I4), CYSI_STACT  (B9DLM4), 
MET5_SCHPO  (Q1K9C2), NASD_BACSU  (P42435)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

NIR_LEPMC   (P43504)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

ARGJ_DESPS  (Q6AJL0)

		
PDB
[Detailed view]
18 PDB

1AOP; 1ZJ8; 1ZJ9; 2AKJ; 2AOP; 2GEP; 3AOP; 3GEO; 4AOP; 4G38; 4G39; 4GEP; 4HTR; 5AOP; 5GEP; 6GEP; 7GEP; 8GEP
» More

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