Entry: PS00365

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General information about the entry

Entry name [info] NIR_SIR
Accession [info] PS00365
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00314

Name and characterization of the entry

Description [info] Nitrite and sulfite reductases iron-sulfur/siroheme-binding site.
Pattern [info]
[STVN]-G-C-x(3)-C-x(6)-[DE]-[LIVMF]-[GAT]-[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 206 in 205 different sequences
Number of true positive hits 205 in 204 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 8
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.51 %
Recall (true positives / (true positives + false negatives)) 96.24 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] iron_sulfur at position 3
Site [info] iron_sulfur/siroheme at position 5
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
204 sequences

ASRC_SALTI  (P0A1Y3), ASRC_SALTY  (P0A1Y2), CBIH_BACME  (O87689), 
COBG_PSEDE  (P21637), CYSI1_KLEP3 (B5XV25), CYSI1_PECCP (C6DCZ7), 
CYSI2_KLEP3 (B5Y1B5), CYSI2_PECCP (C6DDH3), CYSI_ACIF2  (B7JAM6), 
CYSI_ACIF5  (B5EQW2), CYSI_ACTP2  (A3N3D8), CYSI_ACTP7  (B3GZ95), 
CYSI_ACTPJ  (B0BT17), CYSI_ACTPL  (Q8VSR0), CYSI_ACTSZ  (A6VPZ1), 
CYSI_AERHH  (A0KNL0), CYSI_ALISL  (B6ELM5), CYSI_ALTMD  (B4RYS6), 
CYSI_ANOFW  (B7GJU8), CYSI_BACA2  (A7Z8R5), CYSI_BACHD  (Q9KF75), 
CYSI_BACLD  (Q65L57), CYSI_BACP2  (A8FDY3), CYSI_BACSU  (O32213), 
CYSI_BAUCH  (Q1LTP2), CYSI_BLOFL  (Q7VQH1), CYSI_BLOPB  (Q493N3), 
CYSI_BORPD  (A9IT77), CYSI_BUCA5  (B8D9K5), CYSI_BUCAI  (P57502), 
CYSI_BUCAP  (P0C0B2), CYSI_BUCAT  (B8D7V7), CYSI_CHRSD  (Q1QU16), 
CYSI_CITK8  (A8ANX0), CYSI_COLP3  (Q47UW8), CYSI_CROS8  (A7MJ64), 
CYSI_DICDC  (C6CAW9), CYSI_DICZE  (C6CLS0), CYSI_ECO24  (A7ZQK6), 
CYSI_ECO27  (B7UHH5), CYSI_ECO45  (B7MKN0), CYSI_ECO55  (B7LEI2), 
CYSI_ECO57  (Q8X7U2), CYSI_ECO5E  (B5Z3C6), CYSI_ECO7I  (B7NTA0), 
CYSI_ECO81  (B7MYR1), CYSI_ECO8A  (B7LXH6), CYSI_ECOBD  (C5W865), 
CYSI_ECOBR  (C6UCN7), CYSI_ECOBW  (C4ZZR7), CYSI_ECOHS  (A8A3P4), 
CYSI_ECOK1  (A1AEU9), CYSI_ECOL5  (Q0TEA3), CYSI_ECOL6  (Q8FEI8), 
CYSI_ECOLC  (B1IU78), CYSI_ECOLI  (P17846), CYSI_ECOLU  (B7N6Z7), 
CYSI_ECOSE  (B6I6F7), CYSI_ECOSM  (B1LQ86), CYSI_ECOUT  (Q1R7T5), 
CYSI_ENT38  (A4WDW0), CYSI_ERWT9  (B2VG06), CYSI_ESCF3  (B7LWN9), 
CYSI_GEOKA  (Q5L041), CYSI_GEOTN  (A4IMT6), CYSI_KLEP7  (A6TD48), 
CYSI_LEPBA  (B0SF75), CYSI_LEPBP  (B0SNL6), CYSI_LYSSC  (B1HXC1), 
CYSI_MANSM  (Q65T54), CYSI_METC4  (B7L0Y4), CYSI_METEA  (C5APZ1), 
CYSI_METEP  (A9W4X6), CYSI_METNO  (B8IRY2), CYSI_METPB  (B1Z7C5), 
CYSI_METRJ  (B1LS97), CYSI_METS4  (B0U8Y9), CYSI_METSB  (B8EKI5), 
CYSI_MYXXD  (Q1D9W9), CYSI_NEIM0  (A9LZ72), CYSI_NEIMA  (Q9JUD9), 
CYSI_NEIMB  (Q9JS33), CYSI_NEIMF  (A1KU05), CYSI_NITEC  (Q0AGU3), 
CYSI_NITEU  (Q82W45), CYSI_NITHX  (Q1QQC7), CYSI_NITOC  (Q3JBJ1), 
CYSI_NITWN  (Q3SV33), CYSI_OCEIH  (Q8EQP0), CYSI_OLICO  (B6JCW3), 
CYSI_PECAS  (Q6D1A2), CYSI_PHOLL  (Q7N8L5), CYSI_PHOPR  (Q6LM59), 
CYSI_PROMH  (B4F234), CYSI_PSEA6  (Q15NK1), CYSI_PSYIN  (A1T054), 
CYSI_SALA4  (B5F430), CYSI_SALAR  (A9MF17), CYSI_SALCH  (Q57KH8), 
CYSI_SALDC  (B5FTU2), CYSI_SALEP  (B5QW35), CYSI_SALG2  (B5RDS0), 
CYSI_SALHS  (B4TFY4), CYSI_SALNS  (B4T474), CYSI_SALPA  (Q5PEH8), 
CYSI_SALPB  (A9N2E5), CYSI_SALPC  (C0PXC5), CYSI_SALPK  (B5BEZ8), 
CYSI_SALSV  (B4TTX8), CYSI_SALTI  (Q8Z459), CYSI_SALTY  (P17845), 
CYSI_SERP5  (A8G9X7), CYSI_SHEB2  (B8EE51), CYSI_SHEB5  (A3D829), 
CYSI_SHEB8  (A6WJT5), CYSI_SHEB9  (A9L2P8), CYSI_SHEDO  (Q12QQ5), 
CYSI_SHEFN  (Q07Y86), CYSI_SHEHH  (B0TTE4), CYSI_SHELP  (A3QAP0), 
CYSI_SHEON  (Q8EB00), CYSI_SHEPA  (A8H094), CYSI_SHEPC  (A4Y9Z3), 
CYSI_SHEPW  (B8CJV9), CYSI_SHESA  (A0KTH5), CYSI_SHESH  (A8FZY7), 
CYSI_SHESM  (Q0HFL7), CYSI_SHESR  (Q0HYB3), CYSI_SHESW  (A1RGD7), 
CYSI_SHEWM  (B1KE86), CYSI_SHIB3  (B2TZH1), CYSI_SHIBS  (Q31XM5), 
CYSI_SHIDS  (Q32CG4), CYSI_SHIF8  (Q0T1I7), CYSI_SHIFL  (Q83QE0), 
CYSI_SHISS  (Q3YY95), CYSI_SODGM  (Q2NVN3), CYSI_STAEQ  (Q5HKZ7), 
CYSI_STAES  (Q8CMX5), CYSI_STAHJ  (Q4L9F1), CYSI_STAS1  (Q49UL9), 
CYSI_THIRO  (P52673), CYSI_TOLAT  (C4L9J8), CYSI_VIBC3  (A5F3I5), 
CYSI_VIBCB  (A7MSZ7), CYSI_VIBCH  (Q9KUX3), CYSI_VIBCM  (C3LRB7), 
CYSI_VIBF1  (Q5E840), CYSI_VIBFM  (B5FGI9), CYSI_VIBPA  (Q87L91), 
CYSI_VIBSL  (B7VI85), CYSI_VIBVU  (Q8DCK1), CYSI_VIBVY  (Q7MHA6), 
CYSI_XANAC  (Q8PHC8), CYSI_XANC5  (Q3BPY4), CYSI_XANC8  (Q4UY08), 
CYSI_XANCB  (B0RPG6), CYSI_XANCP  (Q8P608), CYSI_XANOM  (Q2P0H2), 
CYSI_XANOP  (B2SI05), CYSI_XANOR  (Q8KQT8), CYSI_XYLF2  (B2IA31), 
CYSI_XYLFA  (Q9PD81), CYSI_XYLFM  (B0U6W0), CYSI_XYLFT  (Q87DH0), 
CYSI_YERE8  (A1JJS3), CYSI_YERP3  (A7FLY9), CYSI_YERPA  (Q1C3Z1), 
CYSI_YERPB  (B2K566), CYSI_YERPE  (Q8ZBN7), CYSI_YERPN  (Q1CLS7), 
CYSI_YERPP  (A4TPY6), CYSI_YERPS  (Q66ED3), CYSI_YERPY  (B1JK04), 
CYSI_ZYMMO  (Q5NRM2), MET5_YEAST  (P47169), NASD_HALMT  (I3R637), 
NIRB_ECOLI  (P08201), NIRB_KLEOX  (Q06458), NIR_ARATH   (Q39161), 
NIR_BETPN   (P38500), NIR_EMENI   (P22944), NIR_MAIZE   (P17847), 
NIR_NEUCR   (P38681), NIR_ORYSJ   (Q42997), NIR_PHOLA   (Q51879), 
NIR_PINSY   (Q43090), NIR_SPIOL   (P05314), NIR_SYNE7   (P39661), 
SIR1_MYCPA  (Q73YC1), SIR1_TOBAC  (O82802), SIR2_MYCPA  (Q73XV0), 
SIR_ARATH   (Q9LZ66), SIR_DESVH   (Q05805), SIR_MAIZE   (O23813), 
SIR_MYCBO   (Q7TYP6), SIR_MYCTO   (P9WJ02), SIR_MYCTU   (P9WJ03), 
SIR_PEA     (Q75NZ0), SIR_SOYBN   (Q9AWB2), SIR_SYNE7   (P30008), 
SIR_SYNY3   (P72854), Y551_METJA  (Q57971), Y870_METJA  (Q58280)
» More

UniProtKB/Swiss-Prot
False negative sequences
8 sequences

CYSI_BACSK  (Q5WKE7), CYSI_BREBN  (C0Z9X2), CYSI_PAESJ  (C6CXN6), 
CYSI_PSEHT  (Q3IFM1), CYSI_SHEAM  (A1S9I4), CYSI_STACT  (B9DLM4), 
MET5_SCHPO  (Q1K9C2), NASD_BACSU  (P42435)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

NIR_LEPMC   (P43504)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

ARGJ_DESPS  (Q6AJL0)

		
PDB
[Detailed view]
18 PDB

1AOP; 1ZJ8; 1ZJ9; 2AKJ; 2AOP; 2GEP; 3AOP; 3GEO; 4AOP; 4G38; 4G39; 4GEP; 4HTR; 5AOP; 5GEP; 6GEP; 7GEP; 8GEP
» More

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