Entry: PS00370

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General information about the entry

Entry name [info] PEP_ENZYMES_PHOS_SITE
Accession [info] PS00370
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); DEC-2001 (DATA UPDATE); FEB-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00527

Name and characterization of the entry

Description [info] PEP-utilizing enzymes phosphorylation site signature.
Pattern [info]
G-[GA]-x-[STN]-x-H-[STA]-[STAV]-[LIVM](2)-[STAV]-[RG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_03 which contains 542'782 sequence entries.


Total number of hits 76 in 76 different sequences
Number of true positive hits 75 in 75 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 18
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 98.68 %
Recall (true positives / (true positives + false negatives)) 80.65 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] phosphorylation at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
75 sequences

PPDK1_ARATH (O23404), PPDK1_MAIZE (P11155), PPDK1_ORYSJ (Q6AVA8), 
PPDK2_ORYSJ (Q75KR1), PPDK_CLOSY  (P22983), PPDK_ENTHI  (P37213), 
PPDK_FLABI  (Q39735), PPDK_FLABR  (Q39734), PPDK_FLAPR  (Q42736), 
PPDK_FLATR  (P22221), PPDK_GIAIN  (P51776), PPDK_MESCR  (Q42910), 
PPDK_RHIME  (Q59754), PPDK_RICBR  (Q1RH78), PPDK_RICCN  (Q92HI8), 
PPDK_RICFE  (Q4ULI7), PPDK_RICPR  (Q9ZD55), PPDK_RICTY  (Q68WP2), 
PPDK_TREPA  (O83728), PPSA_AERPE  (Q9YEC5), PPSA_AQUAE  (O67899), 
PPSA_ARCFU  (O29548), PPSA_DEIRA  (O83026), PPSA_ECOLI  (P23538), 
PPSA_HELPJ  (Q9ZMV4), PPSA_HELPY  (P56070), PPSA_METTH  (O27190), 
PPSA_NEIMB  (Q9K0I2), PPSA_PYRAB  (Q9V2H7), PPSA_PYRFU  (P42850), 
PPSA_PYRHO  (O57830), PPSA_STAMF  (P46893), PPSA_SYNY3  (Q55905), 
PT1P_ECOLI  (P37177), PT1P_SALTY  (P37178), PT1_BACHD   (Q9K8D3), 
PT1_BACME   (O69251), PT1_BACSI   (O83018), PT1_BACSU   (P08838), 
PT1_BORBU   (O51508), PT1_BUCAP   (Q8KA50), PT1_BUCBP   (Q89B04), 
PT1_CHLPN   (Q9Z9E3), PT1_CUPNH   (P23536), PT1_ECOLI   (P08839), 
PT1_ENTFA   (P23530), PT1_GEOSE   (P42014), PT1_HAEIN   (P43922), 
PT1_LACLA   (Q9CJ82), PT1_LACLC   (Q9ZAD8), PT1_LACSK   (O07126), 
PT1_LISIN   (Q92D19), PT1_LISMO   (O31149), PT1_MYCCT   (P45617), 
PT1_MYCGE   (P47668), PT1_MYCPN   (P75168), PT1_SALTI   (P0A250), 
PT1_SALTY   (P0A249), PT1_STAAC   (Q5HH01), PT1_STAAM   (Q931U2), 
PT1_STAAN   (Q99V14), PT1_STAAR   (Q6GI01), PT1_STAAS   (Q6GAD0), 
PT1_STAAU   (P51183), PT1_STAAW   (Q8NX83), PT1_STACT   (P23533), 
PT1_STAEQ   (Q5HQ85), PT1_STAES   (Q8CT19), PT1_STRCO   (Q9KZP1), 
PT1_STREI   (Q9WXK9), PT1_STRMU   (P45595), PT1_STRSL   (P30299), 
PTFAX_RHOCA (P23388), PTFAX_XANCP (P45597), PTFX2_ECOLI (P32670)
» More

UniProtKB/Swiss-Prot
False negative sequences
18 sequences

DHAM_ECOLI  (P37349), GWD1_ARATH  (Q9SAC6), GWD1_CITRE  (Q8LPT9), 
GWD1_SOLTU  (Q9AWA5), GWD2_ARATH  (Q9STV0), PPSA_METJA  (Q57962), 
PPS_BACSU   (O34309), PT1_BUCAI   (Q9WXI6), PT1_CHLMU   (Q9PK57), 
PT1_CHLTR   (O84340), PT1_LYSSH   (Q84F83), PTFAX_ECO57 (Q8XBQ8), 
PTFAX_ECOL6 (Q8FFD8), PTFAX_SHIFL (Q83QP3), PTFX1_ECOLI (P77439), 
PWD_ARATH   (Q6ZY51), PWD_ORYSJ   (Q2QTC2), YVKC_BACSU  (O34796)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PPSA_ENTAG  (O54457)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

ISPD_CUPPJ  (Q472F2)

		
PDB
[Detailed view]
22 PDB

1DIK; 1EZA; 1EZB; 1EZC; 1EZD; 1JDE; 1KBL; 1KC7; 1VBG; 1ZYM; 2DIK; 2EZA; 2EZB; 2EZC; 2FM4; 2KX9; 2OLS; 2R82; 2XDF; 3EZA; 3EZB; 3EZE
» More

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