Entry: PS00409

General information about the entry
Entry name PROKAR_NTER_METHYL
Accession number PS00409
Entry type PATTERN
Date NOV-1990 (CREATED); JUN-1994 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00342
Name and characterization of the entry
DescriptionProkaryotic N-terminal methylation site.
Pattern [KRHEQSTAG]-G-[FYLIVM]-[ST]-[LT]-[LIVP]-E-[LIVMFWSTAG](14).
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 89 hits in 89 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 88 hits in 88 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 1 hits in 1 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 98.88 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 3,methylation
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
BFPA_ECO11  (P58997), BFPA_ECO27  (P33553), COMGC_BACHD (Q9K923), 
COMGC_BACLD (Q8VQ71), COMGC_BACSU (P25955), COMGD_BACSU (P25956), 
COMGE_BACSU (P25957), ECPA_EIKCO  (P35645), ECPB_EIKCO  (P35646), 
ECPC_EIKCO  (Q07564), ECPD_EIKCO  (Q07565), FM12_PSEAI  (P18774), 
FMA0_DICNO  (P27688), FMA1_DICNO  (P17823), FMA2_DICNO  (P17824), 
FMA3_DICNO  (P27689), FMA6_DICNO  (P27690), FMA7_DICNO  (P27691), 
FMAA_DICNO  (P02975), FMAB_DICNO  (P17822), FMAD_DICNO  (P13253), 
FMAE_DICNO  (P17825), FMAF_DICNO  (P17826), FMAG_DICNO  (P11933), 
FMAH_DICNO  (P04953), FMAI_DICNO  (P17827), FMAJ_DICNO  (P19528), 
FMAX_DICNO  (P27906), FMCD_PSEAI  (P17837), FMD1_NEIGO  (Q00045), 
FMD3_NEIGO  (Q00046), FMI_MORBO   (P20657), FMK1_PSEAI  (P17836), 
FMM1_NEIGO  (P02974), FMM1_NEIMA  (P57039), FMM1_NEIMB  (P05431), 
FMM2_NEIGO  (P11764), FMM_MORNO   (P09829), FMP1_PSEAI  (P17838), 
FMP3_PSEAI  (P08015), FMPA_PSEAI  (P02973), FMPO_PSEAE  (P04739), 
FMQ_MORBO   (P07640), FMWC_PSEPU  (P36643), FMZD_DICNO  (P17416), 
FMZH_DICNO  (P17417), GSPG_AERHY  (P31733), GSPG_ECOLI  (P41442), 
GSPG_ERWCH  (P31585), GSPG_KLEPN  (P15746), GSPG_PECCC  (P31586), 
GSPG_PSEAE  (Q00514), GSPG_VIBCH  (P45773), GSPG_XANCP  (P31734), 
GSPH_AERHY  (P31735), GSPH_ECOLI  (P41443), GSPH_ERWCH  (P24687), 
GSPH_KLEPN  (P15747), GSPH_PECCC  (P31587), GSPH_PSEAE  (Q00515), 
GSPH_VIBCH  (P45774), GSPI_AERHY  (P31737), GSPI_ECOLI  (P45760), 
GSPI_ERWCH  (P24688), GSPI_KLEPN  (P15748), GSPI_PECCC  (P31588), 
GSPI_PSEAE  (Q00516), GSPI_VIBCH  (P45775), GSPI_XANCP  (P31738), 
GSPJ_AERHY  (P31739), GSPJ_ECOLI  (P45761), GSPJ_ERWCH  (P24689), 
GSPJ_KLEPN  (P15749), GSPJ_PECCC  (P31589), GSPJ_PSEAE  (Q00517), 
GSPJ_VIBCH  (P45776), GSPJ_XANCP  (P31740), PILA_MYXXD  (Q59589), 
PPDA_CLOPE  (P33555), PPDA_ECOLI  (P33554), PPDB_ECOLI  (P08371), 
PPDC_ECOLI  (P08372), PPDD_ECOLI  (P36647), PPDD_HAEIN  (P44623), 
TAPA_AERHY  (P45791), TCPA_VIBCH  (Q60153), TCPA_VIBCL  (P23024), 
Y1436_AQUAE (O67427)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
GSPH_XANCP  (P31736)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
FMK7_PSEAI  (Q53391)
Sequences which could potentially belong to the set under consideration:
Y2118_AQUAE (O67882)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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