Entry: PS00417

General information about the entry

Entry name [info] SYNAPTOBREVIN
Accession [info] PS00417
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); APR-2006 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00368

Name and characterization of the entry

Description [info] Synaptobrevin signature.
Pattern [info]
[NT]-[LIVMF]-[DENSTG]-[KLNRGS]-[VAI]-x-[DEQA]-R-x(2)-[KRN]-[LIVM]-
[STDEA]-x-[LIVM]-x-[DEQGN]-[KR]-[TAS]-[DEAS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 61 in 61 different sequences
Number of true positive hits 61 in 61 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 22
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 73.49 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
61 sequences

SNC1_YEAST  (P31109), SNC2_YEAST  (P33328), SYB1_CAEBR  (Q60WU2), 
SYB1_CAEEL  (O02495), SYB1_SCHPO  (Q92356), SYBL_SCHMA  (Q27236), 
SYB_APLCA   (P35589), SYB_DORPE   (P47194), SYB_DROME   (P18489), 
SYB_TORCA   (P13701), VA711_ARATH (O49377), VA712_ARATH (Q9SIQ9), 
VA713_ARATH (Q9LFP1), VA714_ARATH (Q9FMR5), VA721_ARATH (Q9ZTW3), 
VA722_ARATH (P47192), VA724_ARATH (O23429), VA725_ARATH (O48850), 
VA726_ARATH (Q9MAS5), VA727_ARATH (Q9M376), VAMP1_BOVIN (Q0V7N0), 
VAMP1_HUMAN (P23763), VAMP1_MOUSE (Q62442), VAMP1_RAT   (Q63666), 
VAMP2_BOVIN (P63026), VAMP2_HUMAN (P63027), VAMP2_MACMU (Q9N0Y0), 
VAMP2_MOUSE (P63044), VAMP2_RAT   (P63045), VAMP2_XENLA (P47193), 
VAMP3_BOVIN (Q2KJD2), VAMP3_HUMAN (Q15836), VAMP3_MACFA (Q4R8T0), 
VAMP3_MOUSE (P63024), VAMP3_RAT   (P63025), VAMP4_BOVIN (Q32L97), 
VAMP4_HUMAN (O75379), VAMP4_MOUSE (O70480), VAMP5_BOVIN (Q2KHY2), 
VAMP5_HUMAN (O95183), VAMP5_MOUSE (Q9Z2P8), VAMP5_RAT   (Q9Z2J5), 
VAMP7_BOVIN (Q17QI5), VAMP7_CHICK (Q5ZL74), VAMP7_HUMAN (P51809), 
VAMP7_MOUSE (P70280), VAMP7_PONAB (Q5RF94), VAMP7_RAT   (Q9JHW5), 
VAMP8_BOVIN (Q3T0Y8), VAMP8_HUMAN (Q9BV40), VAMP8_PONAB (Q5REQ5), 
VAMP8_RAT   (Q9WUF4), YKT61_ARATH (Q9ZRD6), YKT62_ARATH (Q9LVM9), 
YKT6_ASHGO  (Q757A4), YKT6_CANGA  (Q6FW27), YKT6_DEBHA  (Q6BSL0), 
YKT6_KLULA  (Q6CSA2), YKT6_SCHPO  (O60073), YKT6_YARLI  (Q6C537), 
YKT6_YEAST  (P36015)
» More

UniProtKB/Swiss-Prot
False negative sequences
22 sequences

SEC22_ARATH (Q94AU2), SEC22_ASHGO (Q74ZD2), SEC22_CANGA (Q6FWT0), 
SEC22_KLULA (Q6CJA0), SEC22_SCHPO (Q9Y7L0), SEC22_YARLI (Q6C880), 
SEC22_YEAST (P22214), SYBA_DICDI  (Q6TMJ9), SYBB_DICDI  (Q54GB3), 
VA723_ARATH (Q8VY69), VAM7A_DICDI (Q54NW7), VAM7B_DICDI (Q86AQ7), 
VAMP8_MOUSE (O70404), YKT6A_XENLA (Q6DDU7), YKT6B_XENLA (Q32N70), 
YKT6_BOVIN  (Q3T000), YKT6_DANRE  (Q7ZUN8), YKT6_DICDI  (Q54ES8), 
YKT6_HUMAN  (O15498), YKT6_MOUSE  (Q9CQW1), YKT6_RAT    (Q5EGY4), 
YKT6_XENTR  (Q6P816)
» More

PDB
[Detailed view]
16 PDB

1GL2; 1KIL; 1L4A; 1N7S; 1SFC; 2KOG; 2NPS; 3B5N; 3HD7; 3IPD; 3J96; 3J97; 3J98; 3J99; 4B93; 4WY4
» More

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