Entry: PS00417

General information about the entry

Entry name [info] SYNAPTOBREVIN
Accession [info] PS00417
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); APR-2006 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00368

Name and characterization of the entry

Description [info] Synaptobrevin signature.
Pattern [info]
[NT]-[LIVMF]-[DENSTG]-[KLNRGS]-[VAI]-x-[DEQA]-R-x(2)-[KRN]-[LIVM]-
[STDEA]-x-[LIVM]-x-[DEQGN]-[KR]-[TAS]-[DEAS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 61 in 61 different sequences
Number of true positive hits 61 in 61 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 22
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 73.49 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
61 sequences

SNC1_YEAST  (P31109    ), SNC2_YEAST  (P33328    ), SYB1_CAEBR  (Q60WU2    ), 
SYB1_CAEEL  (O02495    ), SYB1_SCHPO  (Q92356    ), SYBL_SCHMA  (Q27236    ), 
SYB_APLCA   (P35589    ), SYB_DORPE   (P47194    ), SYB_DROME   (P18489    ), 
SYB_TETCF   (P13701    ), VA711_ARATH (O49377    ), VA712_ARATH (Q9SIQ9    ), 
VA713_ARATH (Q9LFP1    ), VA714_ARATH (Q9FMR5    ), VA721_ARATH (Q9ZTW3    ), 
VA722_ARATH (P47192    ), VA724_ARATH (O23429    ), VA725_ARATH (O48850    ), 
VA726_ARATH (Q9MAS5    ), VA727_ARATH (Q9M376    ), VAMP1_BOVIN (Q0V7N0    ), 
VAMP1_HUMAN (P23763    ), VAMP1_MOUSE (Q62442    ), VAMP1_RAT   (Q63666    ), 
VAMP2_BOVIN (P63026    ), VAMP2_HUMAN (P63027    ), VAMP2_MACMU (Q9N0Y0    ), 
VAMP2_MOUSE (P63044    ), VAMP2_RAT   (P63045    ), VAMP2_XENLA (P47193    ), 
VAMP3_BOVIN (Q2KJD2    ), VAMP3_HUMAN (Q15836    ), VAMP3_MACFA (Q4R8T0    ), 
VAMP3_MOUSE (P63024    ), VAMP3_RAT   (P63025    ), VAMP4_BOVIN (Q32L97    ), 
VAMP4_HUMAN (O75379    ), VAMP4_MOUSE (O70480    ), VAMP5_BOVIN (Q2KHY2    ), 
VAMP5_HUMAN (O95183    ), VAMP5_MOUSE (Q9Z2P8    ), VAMP5_RAT   (Q9Z2J5    ), 
VAMP7_BOVIN (Q17QI5    ), VAMP7_CHICK (Q5ZL74    ), VAMP7_HUMAN (P51809    ), 
VAMP7_MOUSE (P70280    ), VAMP7_PONAB (Q5RF94    ), VAMP7_RAT   (Q9JHW5    ), 
VAMP8_BOVIN (Q3T0Y8    ), VAMP8_HUMAN (Q9BV40    ), VAMP8_PONAB (Q5REQ5    ), 
VAMP8_RAT   (Q9WUF4    ), YKT61_ARATH (Q9ZRD6    ), YKT62_ARATH (Q9LVM9    ), 
YKT6_ASHGO  (Q757A4    ), YKT6_CANGA  (Q6FW27    ), YKT6_DEBHA  (Q6BSL0    ), 
YKT6_KLULA  (Q6CSA2    ), YKT6_SCHPO  (O60073    ), YKT6_YARLI  (Q6C537    ), 
YKT6_YEAST  (P36015    )
» more

UniProtKB/Swiss-Prot
False negative sequences
22 sequences

SEC22_ARATH (Q94AU2    ), SEC22_ASHGO (Q74ZD2    ), SEC22_CANGA (Q6FWT0    ), 
SEC22_KLULA (Q6CJA0    ), SEC22_SCHPO (Q9Y7L0    ), SEC22_YARLI (Q6C880    ), 
SEC22_YEAST (P22214    ), SYBA_DICDI  (Q6TMJ9    ), SYBB_DICDI  (Q54GB3    ), 
VA723_ARATH (Q8VY69    ), VAM7A_DICDI (Q54NW7    ), VAM7B_DICDI (Q86AQ7    ), 
VAMP8_MOUSE (O70404    ), YKT6A_XENLA (Q6DDU7    ), YKT6B_XENLA (Q32N70    ), 
YKT6_BOVIN  (Q3T000    ), YKT6_DANRE  (Q7ZUN8    ), YKT6_DICDI  (Q54ES8    ), 
YKT6_HUMAN  (O15498    ), YKT6_MOUSE  (Q9CQW1    ), YKT6_RAT    (Q5EGY4    ), 
YKT6_XENTR  (Q6P816    )
» more

PDB
[Detailed view]
20 PDB

1GL2; 1KIL; 1L4A; 1N7S; 1SFC; 2KOG; 2N1T; 2NPS; 3B5N; 3HD7; 3IPD; 3J96; 3J97; 3J98; 3J99; 4B93; 4WY4; 5CCG; 5CCH; 5CCI
» more

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