Entry: PS00417

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General information about the entry

Entry name [info] SYNAPTOBREVIN
Accession [info] PS00417
Entry type [info] PATTERN
Date [info] NOV-1990 (CREATED); APR-2006 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00368

Name and characterization of the entry

Description [info] Synaptobrevin signature.
Pattern [info]
[NT]-[LIVMF]-[DENSTG]-[KLNRGS]-[VAI]-x-[DEQA]-R-x(2)-[KRN]-[LIVM]-
[STDEA]-x-[LIVM]-x-[DEQGN]-[KR]-[TAS]-[DEAS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 61 in 61 different sequences
Number of true positive hits 61 in 61 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 22
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 73.49 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
61 sequences

SNC1_YEAST  (P31109), SNC2_YEAST  (P33328), SYB1_CAEBR  (Q60WU2), 
SYB1_CAEEL  (O02495), SYB1_SCHPO  (Q92356), SYBL_SCHMA  (Q27236), 
SYB_APLCA   (P35589), SYB_DORPE   (P47194), SYB_DROME   (P18489), 
SYB_TORCA   (P13701), VA711_ARATH (O49377), VA712_ARATH (Q9SIQ9), 
VA713_ARATH (Q9LFP1), VA714_ARATH (Q9FMR5), VA721_ARATH (Q9ZTW3), 
VA722_ARATH (P47192), VA724_ARATH (O23429), VA725_ARATH (O48850), 
VA726_ARATH (Q9MAS5), VA727_ARATH (Q9M376), VAMP1_BOVIN (Q0V7N0), 
VAMP1_HUMAN (P23763), VAMP1_MOUSE (Q62442), VAMP1_RAT   (Q63666), 
VAMP2_BOVIN (P63026), VAMP2_HUMAN (P63027), VAMP2_MACMU (Q9N0Y0), 
VAMP2_MOUSE (P63044), VAMP2_RAT   (P63045), VAMP2_XENLA (P47193), 
VAMP3_BOVIN (Q2KJD2), VAMP3_HUMAN (Q15836), VAMP3_MACFA (Q4R8T0), 
VAMP3_MOUSE (P63024), VAMP3_RAT   (P63025), VAMP4_BOVIN (Q32L97), 
VAMP4_HUMAN (O75379), VAMP4_MOUSE (O70480), VAMP5_BOVIN (Q2KHY2), 
VAMP5_HUMAN (O95183), VAMP5_MOUSE (Q9Z2P8), VAMP5_RAT   (Q9Z2J5), 
VAMP7_BOVIN (Q17QI5), VAMP7_CHICK (Q5ZL74), VAMP7_HUMAN (P51809), 
VAMP7_MOUSE (P70280), VAMP7_PONAB (Q5RF94), VAMP7_RAT   (Q9JHW5), 
VAMP8_BOVIN (Q3T0Y8), VAMP8_HUMAN (Q9BV40), VAMP8_PONAB (Q5REQ5), 
VAMP8_RAT   (Q9WUF4), YKT61_ARATH (Q9ZRD6), YKT62_ARATH (Q9LVM9), 
YKT6_ASHGO  (Q757A4), YKT6_CANGA  (Q6FW27), YKT6_DEBHA  (Q6BSL0), 
YKT6_KLULA  (Q6CSA2), YKT6_SCHPO  (O60073), YKT6_YARLI  (Q6C537), 
YKT6_YEAST  (P36015)
» More

UniProtKB/Swiss-Prot
False negative sequences
22 sequences

SEC22_ARATH (Q94AU2), SEC22_ASHGO (Q74ZD2), SEC22_CANGA (Q6FWT0), 
SEC22_KLULA (Q6CJA0), SEC22_SCHPO (Q9Y7L0), SEC22_YARLI (Q6C880), 
SEC22_YEAST (P22214), SYBA_DICDI  (Q6TMJ9), SYBB_DICDI  (Q54GB3), 
VA723_ARATH (Q8VY69), VAM7A_DICDI (Q54NW7), VAM7B_DICDI (Q86AQ7), 
VAMP8_MOUSE (O70404), YKT6A_XENLA (Q6DDU7), YKT6B_XENLA (Q32N70), 
YKT6_BOVIN  (Q3T000), YKT6_DANRE  (Q7ZUN8), YKT6_DICDI  (Q54ES8), 
YKT6_HUMAN  (O15498), YKT6_MOUSE  (Q9CQW1), YKT6_RAT    (Q5EGY4), 
YKT6_XENTR  (Q6P816)
» More

PDB
[Detailed view]
11 PDB

1GL2; 1KIL; 1L4A; 1N7S; 1SFC; 2KOG; 2NPS; 3B5N; 3HD7; 3IPD; 4B93

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