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| Entry: PS00417 |
| General information about the entry | |
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| Entry name | SYNAPTOBREVIN |
| Accession number | PS00417 |
| Entry type | PATTERN |
| Date | NOV-1990 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC00368 |
| Name and characterization of the entry | |
| Description | Synaptobrevin signature. |
| Pattern | [NT]-[LIVMF]-[DENSTG]-[KLNRGS]-[VAI]-x-[DEQA]-R-x(2)-[KRN]-[LIVM]- [STDEA]-x-[LIVM]-x-[DEQGN]-[KR]-[TAS]-[DEAS]. |
| Numerical results | |
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| Comments | |
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| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:SNC1_YEAST (P31109), SNC2_YEAST (P33328), SYB1_CAEBR (Q60WU2), SYB1_CAEEL (O02495), SYB1_SCHPO (Q92356), SYBL_SCHMA (Q27236), SYB_APLCA (P35589), SYB_DORPE (P47194), SYB_DROME (P18489), SYB_TORCA (P13701), VA711_ARATH (O49377), VA712_ARATH (Q9SIQ9), VA713_ARATH (Q9LFP1), VA714_ARATH (Q9FMR5), VA721_ARATH (Q9ZTW3), VA722_ARATH (P47192), VA724_ARATH (O23429), VA725_ARATH (O48850), VA726_ARATH (Q9MAS5), VA727_ARATH (Q9M376), VAMP1_BOVIN (Q0V7N0), VAMP1_HUMAN (P23763), VAMP1_MOUSE (Q62442), VAMP1_RAT (Q63666), VAMP2_BOVIN (P63026), VAMP2_HUMAN (P63027), VAMP2_MACMU (Q9N0Y0), VAMP2_MOUSE (P63044), VAMP2_RAT (P63045), VAMP2_XENLA (P47193), VAMP3_BOVIN (Q2KJD2), VAMP3_HUMAN (Q15836), VAMP3_MACFA (Q4R8T0), VAMP3_MOUSE (P63024), VAMP3_RAT (P63025), VAMP4_BOVIN (Q32L97), VAMP4_HUMAN (O75379), VAMP4_MOUSE (O70480), VAMP5_BOVIN (Q2KHY2), VAMP5_HUMAN (O95183), VAMP5_MOUSE (Q9Z2P8), VAMP5_RAT (Q9Z2J5), VAMP7_BOVIN (Q17QI5), VAMP7_CHICK (Q5ZL74), VAMP7_HUMAN (P51809), VAMP7_MOUSE (P70280), VAMP7_PONAB (Q5RF94), VAMP7_RAT (Q9JHW5), VAMP8_BOVIN (Q3T0Y8), VAMP8_HUMAN (Q9BV40), VAMP8_PONAB (Q5REQ5), VAMP8_RAT (Q9WUF4), YKT61_ARATH (Q9ZRD6), YKT62_ARATH (Q9LVM9), YKT6_ASHGO (Q757A4), YKT6_CANGA (Q6FW27), YKT6_DEBHA (Q6BSL0), YKT6_KLULA (Q6CSA2), YKT6_SCHPO (O60073), YKT6_YARLI (Q6C537), YKT6_YEAST (P36015)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): SEC22_ARATH (Q94AU2), SEC22_ASHGO (Q74ZD2), SEC22_CANGA (Q6FWT0), SEC22_KLULA (Q6CJA0), SEC22_SCHPO (Q9Y7L0), SEC22_YARLI (Q6C880), SEC22_YEAST (P22214), SYBA_DICDI (Q6TMJ9), SYBB_DICDI (Q54GB3), VA723_ARATH (Q8VY69), VAM7A_DICDI (Q54NW7), VAM7B_DICDI (Q86AQ7), VAMP8_MOUSE (O70404), YKT6A_XENLA (Q6DDU7), YKT6B_XENLA (Q32N70), YKT6_BOVIN (Q3T000), YKT6_DANRE (Q7ZUN8), YKT6_DICDI (Q54ES8), YKT6_HUMAN (O15498), YKT6_MOUSE (Q9CQW1), YKT6_RAT (Q5EGY4), YKT6_XENTR (Q6P816)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
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| PDB [Detailed view] |
1GL2; 1KIL; 1L4A; 1N7S; 1SFC; 2BU0; 2KOG; 2NPS; 3B5N; 3HD7; 3IPD; 4B93; |
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