Entry: PS00426

General information about the entry

Entry name [info] CEREAL_TRYP_AMYL_INH
Accession [info] PS00426
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED; 01-JUL-1999 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00350

Name and characterization of the entry

Description [info] Cereal trypsin/alpha-amylase inhibitors family signature.
Pattern [info] 
C-x(4)-[SAGDV]-x(4)-[SPAL]-[LF]-x(2)-C-[RH]-x-[LIVMFYA](2)-x(3,4)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 26 in 26 different sequences
Number of true positive hits 26 in 26 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 5
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 83.87 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 8
Site [info] disulfide at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 26 sequences 

IAA1_HORVU  (P16968    ), IAA1_WHEAT  (P01085    ), IAA2_HORVU  (P13691    ), 

IAA2_WHEAT  (P01083    ), IAA3_WHEAT  (P10846    ), IAA4_SORBI  (P81367    ), 
IAA5_SORBI  (P81368    ), IAA5_WHEAT  (P01084    ), IAAA_HORVU  (P28041    ), 
IAAB_HORVU  (P32936    ), IAAC1_WHEAT (P16850    ), IAAC2_WHEAT (P16851    ), 
IAAC3_WHEAT (P17314    ), IAAC_HORVU  (P34951    ), IAAD_HORVU  (P11643    ), 
IAAE_HORVU  (P01086    ), IAAT_ELECO  (P01087    ), IAA_HORVU   (P16969    ), 
IAC16_WHEAT (P16159    ), IAC17_WHEAT (P16852    ), ICIW2_WHEAT (P83207    ), 
ITRF_MAIZE  (P01088    ), RA05_ORYSJ  (Q01881    ), RA16_ORYSJ  (Q8H4L8    ), 
RAG1_ORYSJ  (Q01883    ), RAG2_ORYSJ  (Q01882    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 5 sequences 

AI171_ORYSJ (Q7X7E6    ), AI172_ORYSJ (Q7X8H9    ), ALCC_WHEAT  (P81496    ), 

IACX1_WHEAT (Q43723    ), IACX2_WHEAT (Q43691    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

IAA_SECCE   (P83048    )


				
	

	

		PDB
[Detailed view]		
		
			6 PDB
			


			1B1U; 1BEA; 1BFA; 1BIP; 1HSS; 1TMQ
				
	





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