PROSITE entry PS00426

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General information about the entry

Entry name [info]	CEREAL_TRYP_AMYL_INH
Accession [info]	PS00426
Entry type [info]	PATTERN
Date [info]	01-NOV-1990 CREATED; 01-JUL-1999 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00350

Name and characterization of the entry

Description [info]	Cereal trypsin/alpha-amylase inhibitors family signature.
Pattern [info]	C-x(4)-[SAGDV]-x(4)-[SPAL]-[LF]-x(2)-C-[RH]-x-[LIVMFYA](2)-x(3,4)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.

Total number of hits	26 in 26 different sequences
Number of true positive hits	26 in 26 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	5
Number of 'partial' sequences	1

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	83.87 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Site [info]	disulfide at position 1
Site [info]	disulfide at position 8
Site [info]	disulfide at position 13
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	26 sequences IAA1_HORVU (P16968), IAA1_WHEAT (P01085), IAA2_HORVU (P13691), IAA2_WHEAT (P01083), IAA3_WHEAT (P10846), IAA4_SORBI (P81367), IAA5_SORBI (P81368), IAA5_WHEAT (P01084), IAAA_HORVU (P28041), IAAB_HORVU (P32936), IAAC1_WHEAT (P16850), IAAC2_WHEAT (P16851), IAAC3_WHEAT (P17314), IAAC_HORVU (P34951), IAAD_HORVU (P11643), IAAE_HORVU (P01086), IAAT_ELECO (P01087), IAA_HORVU (P16969), IAC16_WHEAT (P16159), IAC17_WHEAT (P16852), ICIW2_WHEAT (P83207), ITRF_MAIZE (P01088), RA05_ORYSJ (Q01881), RA16_ORYSJ (Q8H4L8), RAG1_ORYSJ (Q01883), RAG2_ORYSJ (Q01882) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	5 sequences AI171_ORYSJ (Q7X7E6), AI172_ORYSJ (Q7X8H9), ALCC_WHEAT (P81496), IACX1_WHEAT (Q43723), IACX2_WHEAT (Q43691) » more
UniProtKB/Swiss-Prot 'Partial' sequences	1 sequence IAA_SECCE (P83048)
PDB [Detailed view]	6 PDB 1B1U; 1BEA; 1BFA; 1BIP; 1HSS; 1TMQ