Entry: PS00446

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General information about the entry

Entry name [info] RNA_POL_D_30KD
Accession [info] PS00446
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); DEC-2004 (DATA UPDATE); OCT-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00411

Name and characterization of the entry

Description [info] RNA polymerases D / 30 to 40 Kd subunits signature.
Pattern [info]
N-[SGAT]-[LIVMF]-R-R-x(9)-[SAR]-x(3)-[VA]-x(4)-N-x-[STA]-x(3)-[DN]-E-x-
[LIV]-[GSA]-x-R-[LI]-[GAS]-[LIVM](2)-[PV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_11 which contains 547'085 sequence entries.


Total number of hits 43 in 43 different sequences
Number of true positive hits 43 in 43 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.76 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
43 sequences

CNJC_TETTH  (P16925), NRPB3_ARATH (Q39211), RPAC1_BOVIN (Q32L22), 
RPAC1_DICDI (Q54SN4), RPAC1_HUMAN (O15160), RPAC1_MOUSE (P52432), 
RPAC1_SCHPO (O94616), RPAC1_YEAST (P07703), RPB3_BOVIN  (Q3T0Q3), 
RPB3_HUMAN  (P19387), RPB3_MOUSE  (P97760), RPB3_SCHPO  (P37382), 
RPB3_YEAST  (P16370), RPD3B_ARATH (Q39212), RPOD_AERPE  (Q9YB53), 
RPOD_ARCFU  (O28002), RPOD_HALMA  (Q00813), RPOD_HALS3  (B0R4Y2), 
RPOD_HALSA  (Q9HQJ4), RPOD_METAC  (P0CG28), RPOD_METJA  (Q57648), 
RPOD_METKA  (Q8TVB8), RPOD_METMA  (Q8PV16), RPOD_METST  (Q2NFZ6), 
RPOD_METTH  (O26144), RPOD_PYRAB  (Q9V198), RPOD_PYRAE  (Q8ZYQ3), 
RPOD_PYRAR  (A4WNA4), RPOD_PYRCJ  (A3MXZ5), RPOD_PYRFU  (Q8U0E4), 
RPOD_PYRHO  (O59303), RPOD_PYRIL  (A1RSE3), RPOD_PYRNV  (B1YC30), 
RPOD_SULAC  (P39471), RPOD_SULIA  (C3N054), RPOD_SULIK  (C4KJ93), 
RPOD_SULIL  (C3MJP7), RPOD_SULIM  (C3MZ05), RPOD_SULIN  (C3NMQ0), 
RPOD_SULIY  (C3N8R8), RPOD_SULSO  (P95989), RPOD_SULTO  (Q96YW0), 
RPOD_THEKO  (Q5JJF4)
» More

UniProtKB/Swiss-Prot
False negative sequences
6 sequences

RPB3_DICDI  (Q54DH7), RPOD_METS3  (A5UN55), RPOD_NATPD  (Q3IQT6), 
RPOD_PICTO  (Q6KZP5), RPOD_THEAC  (Q9HJD9), RPOD_THEVO  (Q97B93)
» More


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