Entry: PS00456

General information about the entry
Entry name NA_SOLUT_SYMP_1
Accession number PS00456
Entry type PATTERN
Date MAY-1991 (CREATED); DEC-2001 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00429
Name and characterization of the entry
DescriptionSodium:solute symporter family signature 1.
Pattern [GS]-x(2)-[LIY]-x(3)-[LIVMFYWSTAG](7)-x(3)-[LIY]-[STAV]-x(2)-G-G-[LMF]- x-[SAP].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 97 hits in 97 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 95 hits in 95 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 2 hits in 2 different sequences
  • Number of known missed hits: 46
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 97.94 %
  • Recall (true hits / (true hits + false negatives)): 67.38 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ACTP_CITK8  (A8AN31), ACTP_ECO24  (A7ZUU1), ACTP_ECO27  (B7UPN5), 
ACTP_ECO45  (B7MJT5), ACTP_ECO55  (B7LB16), ACTP_ECO57  (Q8X5T7), 
ACTP_ECO5E  (B5Z1C8), ACTP_ECO7I  (B7NSM7), ACTP_ECO81  (B7MSH6), 
ACTP_ECO8A  (B7M7Y0), ACTP_ECOBW  (C5A160), ACTP_ECODH  (B1XCV3), 
ACTP_ECOHS  (A8A7G7), ACTP_ECOK1  (A1AIQ8), ACTP_ECOL5  (Q0T9Y2), 
ACTP_ECOL6  (Q8FAZ0), ACTP_ECOLC  (B1IUI4), ACTP_ECOLI  (P32705), 
ACTP_ECOLU  (B7NG10), ACTP_ECOSE  (B6I5T5), ACTP_ECOSM  (B1LPN2), 
ACTP_ECOUT  (Q1R3J9), ACTP_ENT38  (A4W5I3), ACTP_ERWCT  (Q6D913), 
ACTP_ERWT9  (B2VKE4), ACTP_ESCF3  (B7LMN9), ACTP_KLEP3  (B5XXT7), 
ACTP_KLEP7  (A6TGZ7), ACTP_PECCP  (C6D930), ACTP_PHOLL  (Q7NA72), 
ACTP_SALA4  (B5F2E9), ACTP_SALAR  (A9MGK8), ACTP_SALCH  (Q57GV4), 
ACTP_SALDC  (B5FRF0), ACTP_SALEP  (B5QZ97), ACTP_SALG2  (B5R937), 
ACTP_SALHS  (B4TEB2), ACTP_SALNS  (B4T1W9), ACTP_SALPA  (Q5PJ05), 
ACTP_SALPB  (A9N1R2), ACTP_SALPC  (C0Q552), ACTP_SALPK  (B5BJZ5), 
ACTP_SALSV  (B4TRK2), ACTP_SALTI  (Q8Z1R2), ACTP_SALTY  (Q8ZKF8), 
ACTP_SHIB3  (B2TXA0), ACTP_SHIBS  (Q31TS7), ACTP_SHIFL  (Q83P94), 
ACTP_SHISS  (Q3YUR7), ACTP_YERE8  (A1JIK1), ACTP_YERP3  (A7FNG3), 
ACTP_YERPA  (Q1C0M8), ACTP_YERPB  (B2K137), ACTP_YERPE  (Q8ZJ73), 
ACTP_YERPG  (A9R563), ACTP_YERPN  (Q1CE35), ACTP_YERPP  (A4TS08), 
ACTP_YERPS  (Q66FN0), ACTP_YERPY  (B1JNK6), OPUE_BACSU  (O06493), 
PANF_ECOLI  (P16256), PANF_HAEIN  (P44963), PUTP_ECOLI  (P07117), 
PUTP_HAEIN  (P45174), PUTP_SALTY  (P10502), SC5A1_HUMAN (P13866), 
SC5A1_MOUSE (Q8C3K6), SC5A1_PIG   (P26429), SC5A1_RABIT (P11170), 
SC5A1_RAT   (P53790), SC5A1_SHEEP (P53791), SC5A2_HUMAN (P31639), 
SC5A2_MOUSE (Q923I7), SC5A2_RABIT (P26430), SC5A2_RAT   (P53792), 
SC5A3_BOVIN (P53793), SC5A3_CANFA (P31637), SC5A3_HUMAN (P53794), 
SC5A3_MOUSE (Q9JKZ2), SC5A4_HUMAN (Q9NY91), SC5A4_PIG   (P31636), 
SC5A5_HUMAN (Q92911), SC5A5_MOUSE (Q99PN0), SC5A5_RAT   (Q63008), 
SC5A6_HUMAN (Q9Y289), SC5A6_MOUSE (Q5U4D8), SC5A6_RABIT (Q9XT77), 
SC5A6_RAT   (O70247), SC5A9_DANRE (A8WHP3), SC5A9_HUMAN (Q2M3M2), 
SC5A9_MOUSE (Q8VDT1), SGLT_VIBPH  (P96169), YCGO_BACSU  (P94392), 
YIDK_ECOLI  (P31448), YWCA_BACSU  (P39599)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
DUR3_YEAST  (P33413), PUTP1_STAS1 (Q4A070), PUTP2_STAS1 (Q49YU6), 
PUTP_STAA1  (A7X430), PUTP_STAA2  (A6U307), PUTP_STAA3  (Q2FFJ3), 
PUTP_STAA8  (Q2FWY7), PUTP_STAA9  (A5IU69), PUTP_STAAB  (Q2YU74), 
PUTP_STAAC  (Q5HEM0), PUTP_STAAE  (A6QID0), PUTP_STAAM  (Q99SY5), 
PUTP_STAAN  (Q7A4Q7), PUTP_STAAR  (Q6GFF5), PUTP_STAAS  (Q6G831), 
PUTP_STAAT  (A8Z2R6), PUTP_STAAU  (Q53584), PUTP_STAAW  (Q7A0H2), 
PUTP_STAEQ  (Q5HN32), PUTP_STAES  (Q8CNP2), PUTP_STAHJ  (Q4L7L6), 
SC5A4_MOUSE (Q9ET37), SC5A6_DROME (P83740), SC5A7_CAEEL (O02228), 
SC5A7_DROME (Q9VE46), SC5A7_HUMAN (Q9GZV3), SC5A7_MOUSE (Q8BGY9), 
SC5A7_RAT   (Q9JMD7), SC5A7_TORMA (Q8UWF0), SC5A8_DANRE (Q3ZMH1), 
SC5A8_HUMAN (Q8N695), SC5A8_MOUSE (Q8BYF6), SC5A8_XENLA (Q7SYH5), 
SC5A8_XENTR (Q5BL81), SC5AB_BOVIN (Q3ZC26), SC5AB_HUMAN (Q8WWX8), 
SC5AB_MOUSE (Q8K0E3), SC5AB_PIG   (A8I1B9), SC5AB_RABIT (Q28728), 
SC5AB_RAT   (Q9Z1F2), SC5AC_BOVIN (A7MBD8), SC5AC_DANRE (Q7T384), 
SC5AC_HUMAN (Q1EHB4), SC5AC_MOUSE (Q49B93), Y1315_HAEIN (P71375), 
Y2524_CUPNH (P31640)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
PUTP_KLEOX  (P23723)
False positive hits (sequences which do not belong to the set under consideration):
K1C4_XENLA  (P05781), NUOH_NOCSJ  (A1SE34)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

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