Entry: PS00468

General information about the entry
Entry name COBALAMIN_BINDING
Accession number PS00468
Entry type PATTERN
Date MAY-1991 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00428
Name and characterization of the entry
DescriptionEukaryotic cobalamin-binding proteins signature.
Pattern [SN]-[VT]-D-T-[GAME]-A-[LIVM]-[AV]-x-[LM]-A-[LIVMF]-[ST]-C.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 11 hits in 11 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 11 hits in 11 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
IF_CANFA    (Q5XWD5), IF_HUMAN    (P27352), IF_MOUSE    (P52787), 
IF_RAT      (P17267), TCO1_HUMAN  (P20061), TCO1_PIG    (P17630), 
TCO2_BOVIN  (Q9XSC9), TCO2_HUMAN  (P20062), TCO2_MOUSE  (O88968), 
TCO2_PONAB  (Q5REL7), TCO2_RAT    (Q9R0D6)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 2BB5; 2BB6; 2BBC; 2CKT; 2CKV; 2PMV; 2V3N; 2V3P; 3KQ4;

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