Entry: PS00471

General information about the entry

Entry name [info] SMALL_CYTOKINES_CXC
Accession [info] PS00471
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); APR-2006 (DATA UPDATE); APR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00434

Name and characterization of the entry

Description [info] Small cytokines (intercrine/chemokine) C-x-C subfamily signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_06 which contains 548'586 sequence entries.

Total number of hits 64 in 64 different sequences
Number of true positive hits 64 in 64 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 15
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 81.01 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 3
Site [info] disulfide at position 16
Site [info] disulfide at position 21
Version [info] 2

Cross-references [info]

True positive sequences
64 sequences

AMC2_PIG    (P22952), AMC_RABIT   (P82535), CXCL2_HUMAN (P19875), 
CXCL2_MOUSE (P10889), CXCL2_RAT   (P30348), CXCL3_HUMAN (P19876), 
CXCL3_MOUSE (Q6W5C0), CXCL3_RAT   (Q10746), CXCL5_HUMAN (P42830), 
CXCL5_MOUSE (P50228), CXCL5_RAT   (P97885), CXCL6_BOVIN (P80221), 
CXCL6_HORSE (Q8MIN2), CXCL6_HUMAN (P80162), CXCL7_HUMAN (P02775), 
CXCL7_PIG   (P43030), CXCL9_BOVIN (A9QWP9), CXCL9_HUMAN (Q07325), 
CXL10_HUMAN (P02778), CXL10_MACMU (Q8MIZ1), CXL10_MACNE (Q865F5), 
CXL10_MOUSE (P17515), CXL10_RAT   (P48973), CXL11_BOVIN (A9QWQ1), 
CXL11_HUMAN (O14625), CXL11_MOUSE (Q9JHH5), CXL13_HUMAN (O43927), 
CXL13_MOUSE (O55038), CXL15_MOUSE (Q9WVL7), GRO2_RABIT  (P47854), 
GROA_BOVIN  (O46676), GROA_CAVPO  (O55235), GROA_CRIGR  (P09340), 
GROA_HUMAN  (P09341), GROA_MOUSE  (P12850), GROA_RAT    (P14095), 
GROA_SHEEP  (O46678), GROB_BOVIN  (O46677), GROG_BOVIN  (O46675), 
IL8_BOVIN   (P79255), IL8_CANFA   (P41324), IL8_CAVPO   (P49113), 
IL8_CERAT   (P46653), IL8_CHICK   (P08317), IL8_DASNO   (Q102R3), 
IL8_FELCA   (Q9XSX5), IL8_HORSE   (O62812), IL8_HUMAN   (P10145), 
IL8_MACMU   (P67813), IL8_MACNE   (P67814), IL8_PIG     (P26894), 
IL8_RABIT   (P19874), IL8_SHEEP   (P36925), IL8_TURTR   (Q7YRB5), 
PF4V_HUMAN  (P10720), PLF4_BOVIN  (P02777), PLF4_HUMAN  (P02776), 
PLF4_MOUSE  (Q9Z126), PLF4_PIG    (P30034), PLF4_RAT    (P06765), 
PLF4_SHEEP  (P30035)
» More

False negative sequences
15 sequences

CXL14_HUMAN (O95715), CXL14_MOUSE (Q9WUQ5), CXL16_BOVIN (Q29RT9), 
CXL16_HUMAN (Q9H2A7), CXL16_MOUSE (Q8BSU2), CXL16_PIG   (Q9GKE2), 
CXL16_RAT   (Q6AXU5), SDF1_FELCA  (O62657), SDF1_HUMAN  (P48061), 
SDF1_MOUSE  (P40224), SDF1_XENLA  (Q8UUJ9), SDF1_XENTR  (Q5EBF6), 
» More

'Partial' sequences
2 sequences

GRO1_RABIT  (P30782), PLF4_RABIT  (P83470)

[Detailed view]
30 PDB

1F9P; 1F9Q; 1F9R; 1F9S; 1IL8; 1ILP; 1ILQ; 1MGS; 1MI2; 1MSG; 1MSH; 1NAP; 1O7Y; 1O7Z; 1O80; 1PFM; 1PFN; 1PLF; 1QE6; 1QNK; 1RHP; 1RJT; 1ROD; 1TVX; 2IL8; 2MGS; 2R3Z; 3IL8; 3N52; 4HSV
» More

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