Entry: PS00476

General information about the entry
Entry name FATTY_ACID_DESATUR_1
Accession number PS00476
Entry type PATTERN
Date MAY-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00399
Name and characterization of the entry
DescriptionFatty acid desaturases family 1 signature.
Pattern G-E-x-[FYN]-H-N-[FY]-H-H-x-F-P-x-D-Y.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 19 hits in 19 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 19 hits in 19 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 6
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 76.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ACO11_CHORO (Q8ISS3), ACO11_SPOLI (Q6US81), ACO11_TRINI (O44390), 
ACO1_AJECA  (Q12618), ACO1_SCHPO  (O94523), ACO1_YEAST  (P21147), 
ACOD1_MOUSE (P13516), ACOD1_RAT   (P07308), ACOD2_MOUSE (P13011), 
ACOD2_RAT   (Q6P7B9), ACOD_BOVIN  (Q9TT94), ACOD_CAPHI  (Q95MI7), 
ACOD_CYPCA  (Q92038), ACOD_HUMAN  (O00767), ACOD_MESAU  (Q64420), 
ACOD_PIG    (O02858), ACOD_SHEEP  (O62849), SCD5_BOVIN  (Q2KIA4), 
SCD5_HUMAN  (Q86SK9)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
SLD1_BOROF  (Q9FR82), SLD1_EUGGR  (Q9SWQ9), SLD1_HELAN  (Q43469), 
SLD1_KLULA  (Q6CMK7), SLD1_KLULC  (Q8NKG8), SLD1_LACK1  (Q8NKG9)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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