Entry: PS00482

General information about the entry
Entry name DIHYDROOROTASE_1
Accession number PS00482
Entry type PATTERN
Date MAY-1991 (CREATED); JUL-1999 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00401
Name and characterization of the entry
DescriptionDihydroorotase signature 1.
Pattern D-[LIVMFYWSAP]-H-[LIVA]-H-[LIVF]-[RN]-x-[PGANF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 293 hits in 293 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 279 hits in 279 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 14 hits in 14 different sequences
  • Number of known missed hits: 63
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 95.22 %
  • Recall (true hits / (true hits + false negatives)): 81.58 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 3,zinc(?)
  • `Interesting' site in the pattern: 5,zinc(?)
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ALN1_DICDI  (Q54SV3), ALN2_DICDI  (Q55C91), ALN_LITCT   (P40757), 
ALN_YEAST   (P32375), PYR1_DICDI  (P20054), PYR1_DROME  (P05990), 
PYR1_HUMAN  (P27708), PYR1_MESAU  (P08955), PYR1_SQUAC  (Q91437), 
PYRC_ACAM1  (B0CF78), PYRC_ACIAD  (Q6FD29), PYRC_ACIB3  (B7GX48), 
PYRC_ACIB5  (B7I9G6), PYRC_ACIBC  (B2HWF6), PYRC_ACIBS  (B0VKW9), 
PYRC_ACIBT  (A3M3K3), PYRC_ACIBY  (B0VAC1), PYRC_ACISJ  (A1WC79), 
PYRC_AGRRK  (B9J8H5), PYRC_AGRT5  (Q8UI99), PYRC_AGRVS  (B9JQV9), 
PYRC_ALCBS  (Q0VNK6), PYRC_ALHEH  (Q0AB36), PYRC_ALISL  (B6ER91), 
PYRC_ANAD2  (B8JAE8), PYRC_ANADE  (Q2IIB0), PYRC_ANAPZ  (Q2GL89), 
PYRC_ANASK  (B4UDQ2), PYRC_ANOFW  (B7GFA5), PYRC_AQUAE  (O66990), 
PYRC_ARATH  (O04904), PYRC_ARCFU  (O28034), PYRC_AROAE  (Q5P6Y5), 
PYRC_AZOSB  (A1K3T5), PYRC_AZOVD  (C1DQV1), PYRC_BACAA  (C3P658), 
PYRC_BACAC  (C3L738), PYRC_BACAH  (A0RHR0), PYRC_BACAN  (Q81WF0), 
PYRC_BACC0  (B7JJX5), PYRC_BACC1  (Q732I1), PYRC_BACC2  (B7IUP8), 
PYRC_BACC3  (C1EPQ2), PYRC_BACC4  (B7H6M4), PYRC_BACC7  (B7HLM2), 
PYRC_BACCL  (P46538), PYRC_BACCN  (A7GRL3), PYRC_BACCQ  (B9IVW5), 
PYRC_BACCR  (Q819S1), PYRC_BACCZ  (Q636D8), PYRC_BACHD  (Q9K9V7), 
PYRC_BACHK  (Q6HES6), PYRC_BACLD  (Q65JU9), PYRC_BACP2  (A8FD15), 
PYRC_BACSK  (Q5WFJ0), PYRC_BACSU  (P25995), PYRC_BACWK  (A9VTC8), 
PYRC_BREBN  (C0ZG41), PYRC_BUCA5  (B8D9C1), PYRC_BUCAI  (P57416), 
PYRC_BUCAP  (Q8K9L2), PYRC_BUCAT  (B8D7M3), PYRC_CARHZ  (Q3AC01), 
PYRC_CITK8  (A8AI14), PYRC_CLOD6  (Q18C47), PYRC_CORGL  (Q8NQ39), 
PYRC_CROS8  (A7MG30), PYRC_CUPNH  (Q0KEE2), PYRC_CUPPJ  (Q475T7), 
PYRC_CUPTR  (B2AH54), PYRC_DELAS  (A9BSM4), PYRC_DESAH  (C0QJ54), 
PYRC_DESPS  (Q6AS41), PYRC_DESRM  (A4J556), PYRC_ECO24  (A7ZKG7), 
PYRC_ECO27  (B7UP76), PYRC_ECO45  (B7MIK3), PYRC_ECO55  (B7LFZ6), 
PYRC_ECO57  (Q8X8N8), PYRC_ECO5E  (B5YVT2), PYRC_ECO7I  (B7NL72), 
PYRC_ECO81  (B7MTJ3), PYRC_ECO8A  (B7M937), PYRC_ECOBW  (C4ZS02), 
PYRC_ECODH  (B1X9H5), PYRC_ECOHS  (A7ZZ20), PYRC_ECOK1  (A1A9V7), 
PYRC_ECOL5  (Q0TJ12), PYRC_ECOL6  (Q8FIR2), PYRC_ECOLC  (B1IV40), 
PYRC_ECOLI  (P05020), PYRC_ECOLU  (B7NAT7), PYRC_ECOSE  (B6I9D9), 
PYRC_ECOSM  (B1LIU8), PYRC_ECOUT  (Q1RD95), PYRC_EHRCJ  (Q3YRI2), 
PYRC_EHRCR  (Q2GH90), PYRC_ENT38  (A4W975), PYRC_ENTFA  (Q834E0), 
PYRC_ERWT9  (B2VDJ8), PYRC_ERYLH  (Q2NCC9), PYRC_ESCF3  (B7LT74), 
PYRC_GEOBB  (B5EB50), PYRC_GEOKA  (Q5L0U5), PYRC_GEOLS  (B3E3I1), 
PYRC_GEOMG  (Q39US3), PYRC_GEOSF  (B9M4S4), PYRC_GEOSL  (Q74DP4), 
PYRC_GEOSM  (C6DZ51), PYRC_GEOSW  (C5D8P8), PYRC_GEOTN  (A4IM31), 
PYRC_GEOUR  (A5GF42), PYRC_HAHCH  (Q2SCE3), PYRC_HALHL  (A1WV00), 
PYRC_HALSA  (Q9HMH9), PYRC_HELAH  (Q17W17), PYRC_HELHP  (Q7VIJ1), 
PYRC_HELP2  (B6JLG3), PYRC_HELPH  (Q1CTU5), PYRC_HELPJ  (Q9ZLQ0), 
PYRC_HELPS  (B2UTP7), PYRC_HELPY  (P56465), PYRC_IDILO  (Q5QWC6), 
PYRC_JANSC  (Q28RK3), PYRC_LACLA  (Q9CGM7), PYRC_LACPL  (P77884), 
PYRC_LARHH  (C1D672), PYRC_LEPCP  (B1XWS5), PYRC_LISIN  (Q92AH1), 
PYRC_LISMC  (C1KWD6), PYRC_LISMF  (Q71YH9), PYRC_LISMH  (B8DDR5), 
PYRC_LISMO  (Q8Y663), PYRC_LISW6  (A0AJU2), PYRC_MACCJ  (B9EB67), 
PYRC_MARAV  (A1U3L1), PYRC_MESSB  (Q11IA4), PYRC_METAC  (Q8TSA6), 
PYRC_METFK  (Q1GYZ0), PYRC_METJA  (Q58885), PYRC_METMA  (Q8PVF4), 
PYRC_METTH  (O27199), PYRC_MICAN  (B0JQJ1), PYRC_NEIG1  (Q5F9Y1), 
PYRC_NEIG2  (B4RJT2), PYRC_NEIM0  (A9M2W6), PYRC_NEIMA  (Q9JVD6), 
PYRC_NEIMB  (Q9K0D1), PYRC_NEIMF  (A1KSU5), PYRC_NITEC  (Q0AFI1), 
PYRC_NITEU  (Q82WF3), PYRC_NITOC  (Q3J872), PYRC_PEDPA  (Q03HB2), 
PYRC_PELCD  (Q3A449), PYRC_PELPD  (A1AS12), PYRC_PELTS  (A5D1A4), 
PYRC_PHOLL  (Q7N5W0), PYRC_PHOPR  (Q6LPI7), PYRC_PSE14  (Q48F12), 
PYRC_PSEA6  (Q15YC5), PYRC_PSEA7  (A6V1R9), PYRC_PSEA8  (B7UVV3), 
PYRC_PSEAB  (Q02QZ8), PYRC_PSEAE  (P72170), PYRC_PSEE4  (Q1IE05), 
PYRC_PSEF5  (Q4K747), PYRC_PSEFS  (C3KBZ0), PYRC_PSEMY  (A4XS41), 
PYRC_PSEP1  (A5VZH8), PYRC_PSEPF  (Q3K7J8), PYRC_PSEPG  (B0KUE9), 
PYRC_PSEPK  (Q88NW7), PYRC_PSEPW  (B1J4I2), PYRC_PSESM  (Q87XM1), 
PYRC_PSEU2  (Q4ZPJ8), PYRC_PSEU5  (A4VIU5), PYRC_PSYIN  (A1SX20), 
PYRC_PYRAB  (Q9UXV6), PYRC_PYRFU  (Q8U4A0), PYRC_PYRHO  (O57740), 
PYRC_RALME  (Q1LRD4), PYRC_RALPJ  (B2UFJ8), PYRC_RALSO  (Q8Y249), 
PYRC_RHIE6  (B3Q0A1), PYRC_RHIEC  (Q2KCZ6), PYRC_RHIL3  (Q1MM16), 
PYRC_RHILW  (B5ZNS1), PYRC_RHIME  (Q92SC7), PYRC_RHISN  (C3MF80), 
PYRC_RHOS5  (A4WPB7), PYRC_ROSDO  (Q163V6), PYRC_RUEPO  (Q5LQ43), 
PYRC_RUEST  (Q1GFQ7), PYRC_SALA4  (B5F944), PYRC_SALAR  (A9MH00), 
PYRC_SALCH  (Q57QJ4), PYRC_SALDC  (B5FL01), PYRC_SALEP  (B5QY02), 
PYRC_SALG2  (B5RBD7), PYRC_SALHS  (B4TET5), PYRC_SALNS  (B4T2Z5), 
PYRC_SALPA  (Q5PGW5), PYRC_SALPB  (A9N5P9), PYRC_SALPC  (C0Q845), 
PYRC_SALPK  (B5BBC6), PYRC_SALSV  (B4TSS5), PYRC_SALTI  (Q8Z7L2), 
PYRC_SALTY  (P06204), PYRC_SHEAM  (A1S9L6), PYRC_SHEB2  (B8E4P5), 
PYRC_SHEB5  (A3D7V9), PYRC_SHEB8  (A6WK08), PYRC_SHEB9  (A9L3F5), 
PYRC_SHEDO  (Q12NL3), PYRC_SHEFN  (Q087W5), PYRC_SHEHH  (B0TRS6), 
PYRC_SHELP  (A3QAV2), PYRC_SHEON  (Q8EB40), PYRC_SHEPA  (A8H7J4), 
PYRC_SHEPC  (A4Y9S5), PYRC_SHEPW  (B8CT15), PYRC_SHESA  (A0L0B8), 
PYRC_SHESH  (A8FZC6), PYRC_SHESM  (Q0HLX7), PYRC_SHESR  (Q0HRV9), 
PYRC_SHESW  (A1RGK8), PYRC_SHEWM  (B1KEK5), PYRC_SHIB3  (B2TTK9), 
PYRC_SHIBS  (Q31ZB7), PYRC_SHIDS  (Q32ES3), PYRC_SHIF8  (Q0T5X0), 
PYRC_SHIFL  (Q83RT8), PYRC_SHISS  (Q3Z354), PYRC_SINMW  (A6U5N6), 
PYRC_SOLUE  (Q01V55), PYRC_SPHAL  (Q1GT81), PYRC_STAAC  (Q5HGN1), 
PYRC_STAAM  (P65905), PYRC_STAAN  (P65906), PYRC_STAAR  (Q6GHN4), 
PYRC_STAAS  (Q6GA12), PYRC_STAAW  (P65907), PYRC_STAEQ  (Q5HPZ0), 
PYRC_STAES  (Q8CPJ6), PYRC_STRP1  (Q9A071), PYRC_STRP3  (P0DD64), 
PYRC_STRP6  (Q5XCK2), PYRC_STRP8  (Q7CNB0), PYRC_STRPN  (Q97QN4), 
PYRC_STRPQ  (P0DD65), PYRC_STRR6  (Q8DPQ5), PYRC_STRT1  (Q5LZQ6), 
PYRC_STRT2  (Q5M4C1), PYRC_SULAC  (O08357), PYRC_SULSY  (B2V5I6), 
PYRC_SULTO  (Q970X5), PYRC_SYNFM  (A0LK22), PYRC_SYNP2  (B1XI96), 
PYRC_SYNS9  (Q3AYG9), PYRC_SYNSC  (Q3AKY8), PYRC_SYNY3  (P74438), 
PYRC_TERTT  (C5BNK6), PYRC_THEAC  (Q9HIM0), PYRC_THEAQ  (P96081), 
PYRC_THEMA  (Q9WYH0), PYRC_THEVO  (Q97C35), PYRC_USTMA  (P31301), 
PYRC_VARPS  (C5CMK6), PYRC_VIBCH  (Q9KL24), PYRC_VIBF1  (Q5E0G4), 
PYRC_VIBFM  (B5ETI9), PYRC_VIBHB  (A7N655), PYRC_VIBPA  (Q87J46), 
PYRC_VIBSL  (B7VQP0), PYRC_VIBVU  (Q8D3T9), PYRC_VIBVY  (Q7MFB3), 
PYRC_WOLTR  (Q5GSJ0), PYRC_WOLWR  (C0R5K8), PYRC_YEAST  (P20051)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
PYRC_AERPE  (Q9YFI5), PYRC_CALBD  (B9MS22), PYRC_CALS8  (A4XKT2), 
PYRC_CHLTE  (Q8KDK5), PYRC_CLOAB  (Q97LN7), PYRC_CLOBA  (B2UW91), 
PYRC_CLOBB  (B2TNG1), PYRC_CLOCE  (B8I770), PYRC_CLOTH  (A3DE07), 
PYRC_COXBR  (A9NA67), PYRC_DEIRA  (Q9RVC3), PYRC_EDWI9  (C5BA73), 
PYRC_ELUMP  (B2KCN5), PYRC_ERWCT  (Q6D698), PYRC_FUSNN  (Q8RG88), 
PYRC_HELPG  (B5Z6V2), PYRC_KLEP3  (B5XXJ5), PYRC_KLEP7  (A6T7D6), 
PYRC_LACAC  (Q5FJB8), PYRC_LACDA  (Q1G867), PYRC_LACDB  (Q047M6), 
PYRC_LACF3  (B2GD08), PYRC_LACGA  (Q043B0), PYRC_LACH4  (A8YVZ5), 
PYRC_LACJO  (Q74J32), PYRC_LACLE  (P48795), PYRC_LACS1  (Q1WVB1), 
PYRC_LACSS  (Q38X26), PYRC_LEIXX  (Q6AF87), PYRC_LYSSC  (B1HQB9), 
PYRC_MARMS  (A6VXW9), PYRC_METKA  (Q8TXX9), PYRC_METST  (Q2NHZ6), 
PYRC_MYCBO  (Q7U057), PYRC_MYCLE  (Q9CCR4), PYRC_MYCTU  (P71809), 
PYRC_NOVAD  (Q2G9U3), PYRC_PECCP  (C6DKU3), PYRC_PYRAE  (Q8ZZC7), 
PYRC_PYRKO  (Q5JJ91), PYRC_RHOBA  (Q7UNR2), PYRC_RUBXD  (Q1AVY7), 
PYRC_SCHPO  (Q9UTI0), PYRC_SERP5  (A8GD09), PYRC_STRCO  (Q9KXR3), 
PYRC_SULSO  (Q9UX05), PYRC_SYNAS  (Q2LVI3), PYRC_SYNPX  (Q7U618), 
PYRC_SYNR3  (A5GR03), PYRC_THEP3  (B0KA35), PYRC_THEPX  (B0K2E8), 
PYRC_THETN  (Q8R9R6), PYRC_UNCTG  (B1GYY7), PYRC_YERE8  (A1JN45), 
PYRC_YERP3  (A7FH16), PYRC_YERPA  (Q1C6L6), PYRC_YERPB  (B2K767), 
PYRC_YERPE  (Q8ZFU4), PYRC_YERPG  (A9R7Y6), PYRC_YERPN  (Q1CI09), 
PYRC_YERPP  (A4TLT2), PYRC_YERPS  (Q669K2), PYRC_YERPY  (B1JHH4)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
PYRC_SERMA  (Q9S3S1)
False positive hits (sequences which do not belong to the set under consideration):
ALLB_BACHD  (Q9KAH8), ALLB_DEIGD  (Q1J391), ALLB_RUBXD  (Q1AS71), 
GROU_DROME  (P16371), IGA_NEIGO   (P09790), IGSF2_HUMAN (Q93033), 
LEVR_BACSU  (P23914), SPA11_HUMAN (Q86U17), UGPC_CUPNH  (Q0K998), 
URE1_HALMA  (Q75ZQ5), URE1_NATPD  (Q3IRZ5), VPS10_ASPFC (B0YA89), 
VPS10_ASPFU (Q4WBM1), VPS10_NEOFI (A1DAY6)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1J79; 1XGE; 1XRF; 1XRT; 2E25; 2EG6; 2EG7; 2EG8; 2Z24; 2Z25; 2Z26; 2Z27; 2Z28; 2Z29; 2Z2A; 2Z2B; 3D6N; 3GRI; 3JZE; 3MJM; 3MPG;

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission


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