Entry: PS00482

Forthcoming changes to the profile format
General information about the entry

Entry name [info] DIHYDROOROTASE_1
Accession [info] PS00482
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); JUL-1999 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00401

Name and characterization of the entry

Description [info] Dihydroorotase signature 1.
Pattern [info]
D-[LIVMFYWSAP]-H-[LIVA]-H-[LIVF]-[RN]-x-[PGANF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 295 in 295 different sequences
Number of true positive hits 281 in 281 different sequences
Number of 'unknown' hits
Number of false positive hits 14 in 14 different sequences
Number of false negative sequences 64
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 95.25 %
Recall (true positives / (true positives + false negatives)) 81.45 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] zinc(?) at position 3
Site [info] zinc(?) at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
281 sequences

ALN1_DICDI  (Q54SV3), ALN2_DICDI  (Q55C91), ALN_LITCT   (P40757), 
ALN_YEAST   (P32375), PYR1_DICDI  (P20054), PYR1_DROME  (P05990), 
PYR1_HUMAN  (P27708), PYR1_MESAU  (P08955), PYR1_MOUSE  (B2RQC6), 
PYR1_SQUAC  (Q91437), PYRC_ACAM1  (B0CF78), PYRC_ACIAD  (Q6FD29), 
PYRC_ACIB3  (B7GX48), PYRC_ACIB5  (B7I9G6), PYRC_ACIBC  (B2HWF6), 
PYRC_ACIBS  (B0VKW9), PYRC_ACIBT  (A3M3K3), PYRC_ACIBY  (B0VAC1), 
PYRC_ACISJ  (A1WC79), PYRC_AGRRK  (B9J8H5), PYRC_AGRT5  (Q8UI99), 
PYRC_AGRVS  (B9JQV9), PYRC_ALCBS  (Q0VNK6), PYRC_ALISL  (B6ER91), 
PYRC_ALKEH  (Q0AB36), PYRC_ANAD2  (B8JAE8), PYRC_ANADE  (Q2IIB0), 
PYRC_ANAPZ  (Q2GL89), PYRC_ANASK  (B4UDQ2), PYRC_ANOFW  (B7GFA5), 
PYRC_AQUAE  (O66990), PYRC_ARATH  (O04904), PYRC_ARCFU  (O28034), 
PYRC_AROAE  (Q5P6Y5), PYRC_AZOSB  (A1K3T5), PYRC_AZOVD  (C1DQV1), 
PYRC_BACAA  (C3P658), PYRC_BACAC  (C3L738), PYRC_BACAH  (A0RHR0), 
PYRC_BACAN  (Q81WF0), PYRC_BACC0  (B7JJX5), PYRC_BACC1  (Q732I1), 
PYRC_BACC2  (B7IUP8), PYRC_BACC3  (C1EPQ2), PYRC_BACC4  (B7H6M4), 
PYRC_BACC7  (B7HLM2), PYRC_BACCL  (P46538), PYRC_BACCN  (A7GRL3), 
PYRC_BACCQ  (B9IVW5), PYRC_BACCR  (Q819S1), PYRC_BACCZ  (Q636D8), 
PYRC_BACHD  (Q9K9V7), PYRC_BACHK  (Q6HES6), PYRC_BACLD  (Q65JU9), 
PYRC_BACP2  (A8FD15), PYRC_BACSK  (Q5WFJ0), PYRC_BACSU  (P25995), 
PYRC_BACWK  (A9VTC8), PYRC_BREBN  (C0ZG41), PYRC_BUCA5  (B8D9C1), 
PYRC_BUCAI  (P57416), PYRC_BUCAP  (Q8K9L2), PYRC_BUCAT  (B8D7M3), 
PYRC_CARHZ  (Q3AC01), PYRC_CITK8  (A8AI14), PYRC_CLOD6  (Q18C47), 
PYRC_CORGL  (Q8NQ39), PYRC_CROS8  (A7MG30), PYRC_CUPNH  (Q0KEE2), 
PYRC_CUPPJ  (Q475T7), PYRC_CUPTR  (B2AH54), PYRC_DELAS  (A9BSM4), 
PYRC_DESAH  (C0QJ54), PYRC_DESPS  (Q6AS41), PYRC_DESRM  (A4J556), 
PYRC_ECO24  (A7ZKG7), PYRC_ECO27  (B7UP76), PYRC_ECO45  (B7MIK3), 
PYRC_ECO55  (B7LFZ6), PYRC_ECO57  (Q8X8N8), PYRC_ECO5E  (B5YVT2), 
PYRC_ECO7I  (B7NL72), PYRC_ECO81  (B7MTJ3), PYRC_ECO8A  (B7M937), 
PYRC_ECOBW  (C4ZS02), PYRC_ECODH  (B1X9H5), PYRC_ECOHS  (A7ZZ20), 
PYRC_ECOK1  (A1A9V7), PYRC_ECOL5  (Q0TJ12), PYRC_ECOL6  (Q8FIR2), 
PYRC_ECOLC  (B1IV40), PYRC_ECOLI  (P05020), PYRC_ECOLU  (B7NAT7), 
PYRC_ECOSE  (B6I9D9), PYRC_ECOSM  (B1LIU8), PYRC_ECOUT  (Q1RD95), 
PYRC_EHRCJ  (Q3YRI2), PYRC_EHRCR  (Q2GH90), PYRC_ENT38  (A4W975), 
PYRC_ENTFA  (Q834E0), PYRC_ERWT9  (B2VDJ8), PYRC_ERYLH  (Q2NCC9), 
PYRC_ESCF3  (B7LT74), PYRC_GEOBB  (B5EB50), PYRC_GEODF  (B9M4S4), 
PYRC_GEOKA  (Q5L0U5), PYRC_GEOLS  (B3E3I1), PYRC_GEOMG  (Q39US3), 
PYRC_GEOSL  (Q74DP4), PYRC_GEOSM  (C6DZ51), PYRC_GEOSW  (C5D8P8), 
PYRC_GEOTN  (A4IM31), PYRC_GEOUR  (A5GF42), PYRC_HAHCH  (Q2SCE3), 
PYRC_HALHL  (A1WV00), PYRC_HALSA  (Q9HMH9), PYRC_HELAH  (Q17W17), 
PYRC_HELHP  (Q7VIJ1), PYRC_HELP2  (B6JLG3), PYRC_HELPH  (Q1CTU5), 
PYRC_HELPJ  (Q9ZLQ0), PYRC_HELPS  (B2UTP7), PYRC_HELPY  (P56465), 
PYRC_IDILO  (Q5QWC6), PYRC_JANSC  (Q28RK3), PYRC_LACLA  (Q9CGM7), 
PYRC_LACPL  (P77884), PYRC_LARHH  (C1D672), PYRC_LEPCP  (B1XWS5), 
PYRC_LISIN  (Q92AH1), PYRC_LISMC  (C1KWD6), PYRC_LISMF  (Q71YH9), 
PYRC_LISMH  (B8DDR5), PYRC_LISMO  (Q8Y663), PYRC_LISW6  (A0AJU2), 
PYRC_MACCJ  (B9EB67), PYRC_MARAV  (A1U3L1), PYRC_MESSB  (Q11IA4), 
PYRC_METAC  (Q8TSA6), PYRC_METFK  (Q1GYZ0), PYRC_METJA  (Q58885), 
PYRC_METMA  (Q8PVF4), PYRC_METTH  (O27199), PYRC_MICAN  (B0JQJ1), 
PYRC_NEIG1  (Q5F9Y1), PYRC_NEIG2  (B4RJT2), PYRC_NEIM0  (A9M2W6), 
PYRC_NEIMA  (Q9JVD6), PYRC_NEIMB  (Q9K0D1), PYRC_NEIMF  (A1KSU5), 
PYRC_NITEC  (Q0AFI1), PYRC_NITEU  (Q82WF3), PYRC_NITOC  (Q3J872), 
PYRC_ORYSJ  (Q0JJD1), PYRC_PEDPA  (Q03HB2), PYRC_PELCD  (Q3A449), 
PYRC_PELPD  (A1AS12), PYRC_PELTS  (A5D1A4), PYRC_PHOLL  (Q7N5W0), 
PYRC_PHOPR  (Q6LPI7), PYRC_PSE14  (Q48F12), PYRC_PSEA6  (Q15YC5), 
PYRC_PSEA7  (A6V1R9), PYRC_PSEA8  (B7UVV3), PYRC_PSEAB  (Q02QZ8), 
PYRC_PSEAE  (P72170), PYRC_PSEE4  (Q1IE05), PYRC_PSEF5  (Q4K747), 
PYRC_PSEFS  (C3KBZ0), PYRC_PSEMY  (A4XS41), PYRC_PSEP1  (A5VZH8), 
PYRC_PSEPF  (Q3K7J8), PYRC_PSEPG  (B0KUE9), PYRC_PSEPK  (Q88NW7), 
PYRC_PSEPW  (B1J4I2), PYRC_PSESM  (Q87XM1), PYRC_PSEU2  (Q4ZPJ8), 
PYRC_PSEU5  (A4VIU5), PYRC_PSYIN  (A1SX20), PYRC_PYRAB  (Q9UXV6), 
PYRC_PYRFU  (Q8U4A0), PYRC_PYRHO  (O57740), PYRC_RALME  (Q1LRD4), 
PYRC_RALPJ  (B2UFJ8), PYRC_RALSO  (Q8Y249), PYRC_RHIE6  (B3Q0A1), 
PYRC_RHIEC  (Q2KCZ6), PYRC_RHIL3  (Q1MM16), PYRC_RHILW  (B5ZNS1), 
PYRC_RHIME  (Q92SC7), PYRC_RHISN  (C3MF80), PYRC_RHOS5  (A4WPB7), 
PYRC_ROSDO  (Q163V6), PYRC_RUEPO  (Q5LQ43), PYRC_RUEST  (Q1GFQ7), 
PYRC_SALA4  (B5F944), PYRC_SALAR  (A9MH00), PYRC_SALCH  (Q57QJ4), 
PYRC_SALDC  (B5FL01), PYRC_SALEP  (B5QY02), PYRC_SALG2  (B5RBD7), 
PYRC_SALHS  (B4TET5), PYRC_SALNS  (B4T2Z5), PYRC_SALPA  (Q5PGW5), 
PYRC_SALPB  (A9N5P9), PYRC_SALPC  (C0Q845), PYRC_SALPK  (B5BBC6), 
PYRC_SALSV  (B4TSS5), PYRC_SALTI  (Q8Z7L2), PYRC_SALTY  (P06204), 
PYRC_SHEAM  (A1S9L6), PYRC_SHEB2  (B8E4P5), PYRC_SHEB5  (A3D7V9), 
PYRC_SHEB8  (A6WK08), PYRC_SHEB9  (A9L3F5), PYRC_SHEDO  (Q12NL3), 
PYRC_SHEFN  (Q087W5), PYRC_SHEHH  (B0TRS6), PYRC_SHELP  (A3QAV2), 
PYRC_SHEON  (Q8EB40), PYRC_SHEPA  (A8H7J4), PYRC_SHEPC  (A4Y9S5), 
PYRC_SHEPW  (B8CT15), PYRC_SHESA  (A0L0B8), PYRC_SHESH  (A8FZC6), 
PYRC_SHESM  (Q0HLX7), PYRC_SHESR  (Q0HRV9), PYRC_SHESW  (A1RGK8), 
PYRC_SHEWM  (B1KEK5), PYRC_SHIB3  (B2TTK9), PYRC_SHIBS  (Q31ZB7), 
PYRC_SHIDS  (Q32ES3), PYRC_SHIF8  (Q0T5X0), PYRC_SHIFL  (Q83RT8), 
PYRC_SHISS  (Q3Z354), PYRC_SINMW  (A6U5N6), PYRC_SOLUE  (Q01V55), 
PYRC_SPHAL  (Q1GT81), PYRC_STAAC  (Q5HGN1), PYRC_STAAM  (P65905), 
PYRC_STAAN  (P65906), PYRC_STAAR  (Q6GHN4), PYRC_STAAS  (Q6GA12), 
PYRC_STAAW  (P65907), PYRC_STAEQ  (Q5HPZ0), PYRC_STAES  (Q8CPJ6), 
PYRC_STRP1  (Q9A071), PYRC_STRP3  (P0DD64), PYRC_STRP6  (Q5XCK2), 
PYRC_STRP8  (Q7CNB0), PYRC_STRPN  (Q97QN4), PYRC_STRPQ  (P0DD65), 
PYRC_STRR6  (Q8DPQ5), PYRC_STRT1  (Q5LZQ6), PYRC_STRT2  (Q5M4C1), 
PYRC_SULAC  (O08357), PYRC_SULSY  (B2V5I6), PYRC_SULTO  (Q970X5), 
PYRC_SYNFM  (A0LK22), PYRC_SYNP2  (B1XI96), PYRC_SYNS9  (Q3AYG9), 
PYRC_SYNSC  (Q3AKY8), PYRC_SYNY3  (P74438), PYRC_TERTT  (C5BNK6), 
PYRC_THEAC  (Q9HIM0), PYRC_THEAQ  (P96081), PYRC_THEMA  (Q9WYH0), 
PYRC_THEVO  (Q97C35), PYRC_USTMA  (P31301), PYRC_VARPS  (C5CMK6), 
PYRC_VIBCB  (A7N655), PYRC_VIBCH  (Q9KL24), PYRC_VIBF1  (Q5E0G4), 
PYRC_VIBFM  (B5ETI9), PYRC_VIBPA  (Q87J46), PYRC_VIBSL  (B7VQP0), 
PYRC_VIBVU  (Q8D3T9), PYRC_VIBVY  (Q7MFB3), PYRC_WOLTR  (Q5GSJ0), 
PYRC_WOLWR  (C0R5K8), PYRC_YEAST  (P20051)
» More

UniProtKB/Swiss-Prot
False negative sequences
64 sequences

PYRC_AERPE  (Q9YFI5), PYRC_CALBD  (B9MS22), PYRC_CALS8  (A4XKT2), 
PYRC_CHLTE  (Q8KDK5), PYRC_CLOAB  (Q97LN7), PYRC_CLOBA  (B2UW91), 
PYRC_CLOBB  (B2TNG1), PYRC_CLOCE  (B8I770), PYRC_CLOTH  (A3DE07), 
PYRC_COXBR  (A9NA67), PYRC_DEIRA  (Q9RVC3), PYRC_EDWI9  (C5BA73), 
PYRC_ELUMP  (B2KCN5), PYRC_FUSNN  (Q8RG88), PYRC_HELPG  (B5Z6V2), 
PYRC_KLEP3  (B5XXJ5), PYRC_KLEP7  (A6T7D6), PYRC_LACAC  (Q5FJB8), 
PYRC_LACDA  (Q1G867), PYRC_LACDB  (Q047M6), PYRC_LACF3  (B2GD08), 
PYRC_LACGA  (Q043B0), PYRC_LACH4  (A8YVZ5), PYRC_LACJO  (Q74J32), 
PYRC_LACLE  (P48795), PYRC_LACS1  (Q1WVB1), PYRC_LACSS  (Q38X26), 
PYRC_LEIXX  (Q6AF87), PYRC_LYSSC  (B1HQB9), PYRC_MARMS  (A6VXW9), 
PYRC_METKA  (Q8TXX9), PYRC_METST  (Q2NHZ6), PYRC_MYCBO  (Q7U057), 
PYRC_MYCLE  (Q9CCR4), PYRC_MYCTO  (P9WHL2), PYRC_MYCTU  (P9WHL3), 
PYRC_NOVAD  (Q2G9U3), PYRC_PECAS  (Q6D698), PYRC_PECCP  (C6DKU3), 
PYRC_PYRAE  (Q8ZZC7), PYRC_RHOBA  (Q7UNR2), PYRC_RUBXD  (Q1AVY7), 
PYRC_SCHPO  (Q9UTI0), PYRC_SERP5  (A8GD09), PYRC_STRCO  (Q9KXR3), 
PYRC_SULSO  (Q9UX05), PYRC_SYNAS  (Q2LVI3), PYRC_SYNPX  (Q7U618), 
PYRC_SYNR3  (A5GR03), PYRC_THEKO  (Q5JJ91), PYRC_THEP3  (B0KA35), 
PYRC_THEPX  (B0K2E8), PYRC_THETN  (Q8R9R6), PYRC_UNCTG  (B1GYY7), 
PYRC_YERE8  (A1JN45), PYRC_YERP3  (A7FH16), PYRC_YERPA  (Q1C6L6), 
PYRC_YERPB  (B2K767), PYRC_YERPE  (Q8ZFU4), PYRC_YERPG  (A9R7Y6), 
PYRC_YERPN  (Q1CI09), PYRC_YERPP  (A4TLT2), PYRC_YERPS  (Q669K2), 
PYRC_YERPY  (B1JHH4)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PYRC_SERMA  (Q9S3S1)

		
UniProtKB/Swiss-Prot
False positive sequences
14 sequences

ALLB_BACHD  (Q9KAH8), ALLB_DEIGD  (Q1J391), ALLB_RUBXD  (Q1AS71), 
GROU_DROME  (P16371), IGA_NEIGO   (P09790), IGSF2_HUMAN (Q93033), 
LEVR_BACSU  (P23914), SPA11_HUMAN (Q86U17), UGPC_CUPNH  (Q0K998), 
URE1_HALMA  (Q75ZQ5), URE1_NATPD  (Q3IRZ5), VPS10_ASPFC (B0YA89), 
VPS10_ASPFU (Q4WBM1), VPS10_NEOFI (A1DAY6)
» More

PDB
[Detailed view]
35 PDB

1J79; 1XGE; 1XRF; 1XRT; 2E25; 2EG6; 2EG7; 2EG8; 2Z24; 2Z25; 2Z26; 2Z27; 2Z28; 2Z29; 2Z2A; 2Z2B; 3D6N; 3GRI; 3JZE; 3MJM; 3MPG; 4BJH; 4C6C; 4C6D; 4C6E; 4C6F; 4C6I; 4C6J; 4C6K; 4C6L; 4C6M; 4C6N; 4C6O; 4C6P; 4C6Q
» More

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