Entry: PS00501

General information about the entry
Entry name SPASE_I_1
Accession number PS00501
Entry type PATTERN
Date MAY-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00418
Associated ProRule PRU10097
Name and characterization of the entry
DescriptionSignal peptidases I serine active site.
Pattern [GS]-{PR}-S-M-{RS}-[PS]-[AT]-[LF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 181 hits in 181 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 120 hits in 120 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 61 hits in 61 different sequences
  • Number of known missed hits: 21
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 66.30 %
  • Recall (true hits / (true hits + false negatives)): 85.11 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 3,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
IMP1_YEAST  (P28627), IMP2_YEAST  (P46972), LEP1_BACAM  (P41026), 
LEP1_SYNY3  (P72660), LEP2_BACAM  (P41025), LEP2_SYNY3  (P73157), 
LEPP_BACNA  (P37943), LEPQ_BACNA  (Q57350), LEPS_BACSU  (P28628), 
LEPT_BACSU  (P71013), LEPU_BACSU  (P42959), LEPV_BACSU  (O07560), 
LEP_AQUAE   (O67088), LEP_BACCL   (P41027), LEP_BACLI   (P42668), 
LEP_BUCAI   (P57347), LEP_BUCAP   (Q8K9R0), LEP_BUCBP   (Q89AM6), 
LEP_ECOLI   (P00803), LEP_HAEIN   (P44454), LEP_MYCLE   (O33021), 
LEP_MYCTU   (Q10789), LEP_PHOLA   (Q51876), LEP_PSEAE   (Q9I5G7), 
LEP_PSEFL   (P26844), LEP_SALTI   (P0A1W3), LEP_SALTY   (P0A1W2), 
LEP_STAAC   (Q5HHB9), LEP_STAAM   (P0A067), LEP_STAAN   (P0A068), 
LEP_STAAR   (Q6GIC3), LEP_STAAS   (Q6GAW1), LEP_STAAU   (P0A070), 
LEP_STAAW   (P0A069), LEP_STRPN   (O07344), LEP_STRR6   (P59662), 
PLSP1_ARATH (Q8H0W1), SC11A_BOVIN (P67810), SC11A_CANFA (P67811), 
SC11A_HUMAN (P67812), SC11A_MOUSE (Q9R0P6), SC11A_PONAB (Q5R9C7), 
SC11A_RAT   (P42667), SC11B_HUMAN (P0C7V7), SC11C_CANFA (P13679), 
SC11C_HUMAN (Q9BY50), SC11C_MOUSE (Q9D8V7), SC11C_PONAB (Q5RC30), 
SC11C_RAT   (Q9WTR7), SEC11_AJEC8 (F0UDD2), SEC11_AJECG (C0NKT8), 
SEC11_AJECH (C6HB29), SEC11_AJECN (A6QX24), SEC11_AJEDR (C5G8L5), 
SEC11_AJEDS (C5JJG5), SEC11_ARTBC (D4ALL0), SEC11_ARTGP (E4V4X0), 
SEC11_ARTOC (C5FQ45), SEC11_ASHGO (Q759W4), SEC11_ASPCL (A1CL29), 
SEC11_ASPFC (B0XWT3), SEC11_ASPFU (Q4WYF4), SEC11_ASPOR (Q2UBW3), 
SEC11_ASPTN (Q0CQC5), SEC11_CANAL (Q5A869), SEC11_CANAW (C4YNJ0), 
SEC11_CANDC (B9WKT4), SEC11_CANTT (C5M4J6), SEC11_CHAGB (Q2H1P3), 
SEC11_CLAL4 (C4Y3D4), SEC11_COCP7 (C5PA33), SEC11_COCPS (E9CXH2), 
SEC11_COLGM (E3QXY4), SEC11_DEBHA (Q6BP15), SEC11_DICDI (Q86JD4), 
SEC11_EMENI (Q5B8K4), SEC11_GROCL (F0XJH4), SEC11_KLULA (Q6CMR5), 
SEC11_LACBS (B0D4L0), SEC11_LACTC (C5DDH1), SEC11_LEPMJ (E5A8D2), 
SEC11_LODEL (A5DS09), SEC11_MAGO7 (A4RGA1), SEC11_METAQ (E9E796), 
SEC11_METAR (E9F8V9), SEC11_NECH7 (C7ZHK5), SEC11_NEOFI (A1D6D8), 
SEC11_NEUCR (Q7RY44), SEC11_PARBA (C1GU90), SEC11_PARBD (C1FYD2), 
SEC11_PARBP (C0S3S0), SEC11_PENCW (B6HC89), SEC11_PENMQ (B6Q5G0), 
SEC11_PICAD (E7R7C4), SEC11_PICGU (A5DIZ8), SEC11_PICPG (C4QXP7), 
SEC11_PICST (A3LXS1), SEC11_PODAN (B2B3T2), SEC11_PYRTR (B2WEL2), 
SEC11_PYRTT (E3RR70), SEC11_SCHCM (D8Q7Q5), SEC11_SCLS1 (A7E716), 
SEC11_TALSN (B8M5K5), SEC11_TRIVH (D4D5I1), SEC11_TUBMM (D5GNC3), 
SEC11_UNCRE (C4JYM4), SEC11_VERA1 (C9S8G0), SEC11_YEAS1 (B3LTI7), 
SEC11_YEAS2 (C7GLT4), SEC11_YEAS7 (A6ZVU2), SEC11_YEAS8 (C8ZAS4), 
SEC11_YEASA (E7KDY6), SEC11_YEASB (E7Q587), SEC11_YEASL (E7KQ01), 
SEC11_YEAST (P15367), SEC11_YEASV (E7LVX4), SEC11_YEASZ (E7QG89), 
SEC11_ZYGRC (C5E3W1), TPP1_ARATH  (O04348), TPP2_ARATH  (Q9M9Z2)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
IMP1L_HUMAN (Q96LU5), IMP1L_MOUSE (Q9CQU8), IMP1L_XENTR (Q28I39), 
IMP2L_BOVIN (Q2KI92), IMP2L_DANRE (Q6AZD4), IMP2L_HUMAN (Q96T52), 
IMP2L_MOUSE (Q8BPT6), IMP2L_SCHPO (Q9UST2), IMP2L_XENLA (Q5PQ63), 
LEPH_STAAC  (Q5HHC0), LEPH_STAAM  (P0A063), LEPH_STAAN  (P0A064), 
LEPH_STAAR  (Q6GIC4), LEPH_STAAS  (Q6GAW2), LEPH_STAAU  (P0A066), 
LEPH_STAAW  (P0A065), LEP_HELPJ   (Q9ZLQ5), LEP_HELPY   (O25300), 
LEP_RICCN   (Q92JB1), LEP_RICPR   (Q9ZE32), SEC11_YARLI (Q6CAG9)
False positive hits (sequences which do not belong to the set under consideration):
ALDO1_ARATH (Q7G193), AQPZ_ECO57  (Q8X6K6), AQPZ_ECOL6  (P60845), 
AQPZ_ECOLI  (P60844), AQPZ_SHIFL  (O68874), ATG12_ASPCL (A1CTJ1), 
ATG12_ASPFU (A4D9P4), ATG12_ASPOR (Q2UMW6), ATG12_COCIM (Q1E8C2), 
ATG12_MAGO7 (Q51P78), ATG12_NEOFI (A1DMW6), CDKL5_HUMAN (O76039), 
DDL_SYNPW   (A5GML7), ERF1_CAEEL  (O16520), FREM1_HUMAN (Q5H8C1), 
GNL3L_BOVIN (Q3T0J9), GNL3L_HUMAN (Q9NVN8), LVSD_DICDI  (Q55AV3), 
L_CHAVB     (B2C4J3), NAGA_HUMAN  (Q9Y303), NFAA_DICDI  (Q55AR6), 
O51S1_HUMAN (Q8NGJ8), PEPF1_LACLC (P54124), PEPF_LACLA  (Q9CEV7), 
PLSX_PARDP  (A1B363), PLSX_RUEST  (Q1GI68), POC1A_MOUSE (Q8JZX3), 
PPE19_MYCTU (Q11031), PR2_DROME   (Q9I7F7), RIMB2_MOUSE (Q80U40), 
RIMB2_RAT   (Q9JIR1), RS9_STRCO   (Q53875), SNL4_ARATH  (O04539), 
SNT2_YEAST  (P53127), STU1_SCHPO  (O42874), TBB1_AVESA  (P25862), 
TBB1_ORYSJ  (Q43594), TBB1_WHEAT  (Q9ZRB2), TBB2_ELEIN  (Q9ZPN9), 
TBB2_WHEAT  (Q9ZRB1), TBB3_GOSHI  (Q6VAF8), TBB3_PEA    (P29502), 
TBB4_ELEIN  (Q9ZPN7), TBB4_ORYSJ  (P45960), TBB5_MAIZE  (Q43697), 
TBB5_WHEAT  (Q9ZRA8), TBB6_ARATH  (P29514), TBB6_MAIZE  (Q41783), 
TBB6_ORYSJ  (Q76FS3), TBB8_MAIZE  (Q41785), TBB8_ORYSJ  (Q76FS2), 
TBB_HORVU   (P93176), TDA7_CANGA  (Q6FNJ6), TPIS_GRAGA  (P48492), 
TPO5_YEAST  (P36029), TRM51_VITVI (F6H2F8), UPP3_SCHPO  (Q9US43), 
VPS10_NECH7 (C7YGZ0), Y017_OSHVF  (Q6R7K6), ZF69B_HUMAN (Q9UJL9), 
ZN598_DANRE (Q6PFK1)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1B12; 1KN9; 1T7D; 3IIQ; 3S04;

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View entry in raw text format (no links)
Direct ScanProsite submission


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