Due to maintenance work, this service will not be available on Monday December 12th between 07.00 am and 9.00 am CEST.
Entry: PS00504

General information about the entry

Entry name [info] FRD_SDH_FAD_BINDING
Accession [info] PS00504
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); NOV-1995 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00393

Name and characterization of the entry

Description [info] Fumarate reductase / succinate dehydrogenase FAD-binding site.
Pattern [info]
R-[ST]-H-[ST]-x(2)-A-x-G-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 43 in 43 different sequences
Number of true positive hits 43 in 43 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.73 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] FAD_binding at position 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
43 sequences

FRDA_ECOLI  (P00363    ), FRDA_HAEIN  (P44894    ), FRDA_HELPJ  (Q9ZMP0    ), 
FRDA_HELPY  (O06913    ), FRDA_MYCBO  (P64175    ), FRDA_MYCTO  (P9WN90    ), 
FRDA_MYCTU  (P9WN91    ), FRDA_PROVU  (P20922    ), FRDA_WOLSU  (P17412    ), 
SDHA1_ARATH (O82663    ), SDHA2_ARATH (Q9ZPX5    ), SDHAA_XENLA (Q6PA58    ), 
SDHAB_XENLA (Q801S2    ), SDHA_BACSU  (P08065    ), SDHA_BOVIN  (P31039    ), 
SDHA_CAEEL  (Q09508    ), SDHA_CHICK  (Q9YHT1    ), SDHA_COXBU  (P51054    ), 
SDHA_DANRE  (Q7ZVF3    ), SDHA_DICDI  (Q9U3X4    ), SDHA_DROME  (Q94523    ), 
SDHA_ECO57  (P0AC43    ), SDHA_ECOL6  (P0AC42    ), SDHA_ECOLI  (P0AC41    ), 
SDHA_HUMAN  (P31040    ), SDHA_MACFA  (Q8HXW3    ), SDHA_MESAU  (Q0QF17    ), 
SDHA_MOUSE  (Q8K2B3    ), SDHA_ORYSJ  (Q6ZDY8    ), SDHA_PARDE  (Q59661    ), 
SDHA_PIG    (Q0QF01    ), SDHA_PONAB  (Q5R616    ), SDHA_RAT    (Q920L2    ), 
SDHA_RICBR  (Q1RHB9    ), SDHA_RICCN  (Q92J97    ), SDHA_RICFE  (Q4UJM1    ), 
SDHA_RICPR  (P31038    ), SDHA_RICTY  (Q68XN9    ), SDHA_SALTY  (Q8ZQU3    ), 
SDHA_SCHPO  (Q9UTJ7    ), SDHA_XENTR  (Q28ED0    ), SDHA_YEAST  (Q00711    ), 
SDHX_YEAST  (P47052    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

MFRA_WOLSU  (Q7M827    )

		
PDB
[Detailed view]
54 PDB

1E7P; 1KF6; 1KFY; 1L0V; 1NEK; 1NEN; 1QLB; 1YQ3; 1YQ4; 1ZOY; 1ZP0; 2ACZ; 2B76; 2BS2; 2BS3; 2BS4; 2FBW; 2H88; 2H89; 2WDQ; 2WDR; 2WDV; 2WP9; 2WQY; 2WS3; 2WU2; 2WU5; 3ABV; 3AE1; 3AE2; 3AE3; 3AE4; 3AE5; 3AE6; 3AE7; 3AE8; 3AE9; 3AEA; 3AEB; 3AEC; 3AED; 3AEE; 3AEF; 3AEG; 3CIR; 3P4P; 3P4Q; 3P4R; 3P4S; 3SFD; 3SFE; 4KX6; 4YTP; 4YXD
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission