Entry: PS00504

General information about the entry
Entry name FRD_SDH_FAD_BINDING
Accession number PS00504
Entry type PATTERN
Date MAY-1991 (CREATED); NOV-1995 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00393
Name and characterization of the entry
DescriptionFumarate reductase / succinate dehydrogenase FAD-binding site.
Pattern R-[ST]-H-[ST]-x(2)-A-x-G-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 42 hits in 42 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 42 hits in 42 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 3,FAD_binding
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
DHSA1_ARATH (O82663), DHSA2_ARATH (Q9ZPX5), DHSAA_XENLA (Q6PA58), 
DHSAB_XENLA (Q801S2), DHSA_BACSU  (P08065), DHSA_BOVIN  (P31039), 
DHSA_CAEEL  (Q09508), DHSA_CHICK  (Q9YHT1), DHSA_COXBU  (P51054), 
DHSA_DANRE  (Q7ZVF3), DHSA_DICDI  (Q9U3X4), DHSA_DROME  (Q94523), 
DHSA_ECO57  (P0AC43), DHSA_ECOL6  (P0AC42), DHSA_ECOLI  (P0AC41), 
DHSA_HUMAN  (P31040), DHSA_MACFA  (Q8HXW3), DHSA_MESAU  (Q0QF17), 
DHSA_MOUSE  (Q8K2B3), DHSA_ORYSJ  (Q6ZDY8), DHSA_PARDE  (Q59661), 
DHSA_PIG    (Q0QF01), DHSA_PONAB  (Q5R616), DHSA_RAT    (Q920L2), 
DHSA_RICBR  (Q1RHB9), DHSA_RICCN  (Q92J97), DHSA_RICFE  (Q4UJM1), 
DHSA_RICPR  (P31038), DHSA_RICTY  (Q68XN9), DHSA_SALTY  (Q8ZQU3), 
DHSA_SCHPO  (Q9UTJ7), DHSA_XENTR  (Q28ED0), DHSA_YEAST  (Q00711), 
DHSX_YEAST  (P47052), FRDA_ECOLI  (P00363), FRDA_HAEIN  (P44894), 
FRDA_HELPJ  (Q9ZMP0), FRDA_HELPY  (O06913), FRDA_MYCBO  (P64175), 
FRDA_MYCTU  (P64174), FRDA_PROVU  (P20922), FRDA_WOLSU  (P17412)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1E7P; 1KF6; 1KFY; 1L0V; 1NEK; 1NEN; 1ORZ; 1PB4; 1QLB; 1YQ3; 1YQ4; 1ZOY; 1ZP0; 2ACZ; 2AD0; 2B76; 2BS2; 2BS3; 2BS4; 2FBW; 2H88; 2H89; 2WDQ; 2WDR; 2WDV; 2WP9; 2WQY; 2WS3; 2WU2; 2WU5; 3ABV; 3AE1; 3AE2; 3AE3; 3AE4; 3AE5; 3AE6; 3AE7; 3AE8; 3AE9; 3AEA; 3AEB; 3AEC; 3AED; 3AEE; 3AEF; 3AEG; 3CIR; 3P4P; 3P4Q; 3P4R; 3P4S; 3SFD; 3SFE;

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