Entry: PS00506

General information about the entry

Entry name [info] BETA_AMYLASE_1
Accession [info] PS00506
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); MAY-1991 (DATA UPDATE); OCT-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00414

Name and characterization of the entry

Description [info] Beta-amylase active site 1.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_11 which contains 549'832 sequence entries.

Total number of hits 19 in 19 different sequences
Number of true positive hits 19 in 19 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.61 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 9
Version [info] 1

Cross-references [info]

True positive sequences
19 sequences

AMYB_BACCE  (P36924), AMYB_BACCI  (P06547), AMYB_BACFI  (P96513), 
AMYB_HORVS  (P82993), AMYB_HORVU  (P16098), AMYB_IPOBA  (P10537), 
AMYB_MAIZE  (P55005), AMYB_MEDSA  (O22585), AMYB_PAEPO  (P21543), 
AMYB_SOYBN  (P10538), AMYB_THETU  (P19584), AMYB_TRIRP  (O65015), 
AMYB_VIGUN  (O64407), AMYB_WHEAT  (P93594), BAM1_ARATH  (Q9LIR6), 
BAM2_ARATH  (O65258), BAM3_ARATH  (O23553), BAM5_ARATH  (P25853), 
BAM7_ARATH  (O80831)
» more

False negative sequences
4 sequences

BAM4_ARATH  (Q9FM68), BAM6_ARATH  (Q8L762), BAM8_ARATH  (Q9FH80), 
» more

'Partial' sequences
1 sequence

AMYB_SECCE  (P30271)

[Detailed view]
42 PDB

1B1Y; 1B90; 1B9Z; 1BFN; 1BTC; 1BYA; 1BYB; 1BYC; 1BYD; 1FA2; 1ITC; 1J0Y; 1J0Z; 1J10; 1J11; 1J12; 1J18; 1Q6C; 1Q6D; 1Q6E; 1Q6F; 1Q6G; 1UKO; 1UKP; 1V3H; 1V3I; 1VEM; 1VEN; 1VEO; 1VEP; 1WDP; 1WDQ; 1WDR; 1WDS; 2XFF; 2XFR; 2XFY; 2XG9; 2XGB; 2XGI; 3VOC; 5BCA
» more

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