Entry: PS00507

General information about the entry

Entry name [info] NI_HGENASE_L_1
Accession [info] PS00507
Entry type [info] PATTERN
Date [info] MAY-1991 (CREATED); DEC-2004 (DATA UPDATE); OCT-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00400

Name and characterization of the entry

Description [info] Nickel-dependent hydrogenases large subunit signature 1.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_11 which contains 549'832 sequence entries.

Total number of hits 33 in 33 different sequences
Number of true positive hits 33 in 33 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] nickel at position 9
Site [info] nickel at position 12
Version [info] 1

Cross-references [info]

True positive sequences
33 sequences

FRHA_METBF  (P80489), FRHA_METJA  (Q60338), FRHA_METTH  (P19496), 
FRHA_METVO  (Q00390), HOXH_CUPNH  (P22320), MBHL_ALCHY  (P33374), 
MBHL_AZOCH  (P18191), MBHL_AZOVI  (P21949), MBHL_BRADU  (P12636), 
MBHL_CITFR  (Q46046), MBHL_CUPNH  (P31891), MBHL_ECOLI  (P0ACD8), 
MBHL_OLICO  (O33406), MBHL_RHILV  (P18636), MBHL_RHOCA  (P15284), 
MBHL_RUBGE  (P17632), MBHL_SHIFL  (P0ACD9), MBHL_WOLSU  (P31883), 
MVHA_METFE  (Q49179), MVHA_METTH  (Q50783), MVHA_METTM  (P60227), 
PHNL_DESFR  (P18188), PHNL_DESGI  (P12944), PHNL_DESVM  (P21852), 
PHSL_DESBA  (P13065), VHCA_METVO  (Q00404), VHUA_METJA  (Q58592), 
VHUA_METVO  (Q00407), Y1027_METJA (Q58433), Y515_METJA  (Q57935)
» more

False negative sequences
3 sequences


'Partial' sequences
2 sequences

HOXH_RHOOP  (P22661), PHSL_DESNO  (P13066)

[Detailed view]
39 PDB

1CC1; 1FRF; 1FRV; 1H2A; 1H2R; 1UBH; 1UBJ; 1UBK; 1UBL; 1UBM; 1UBO; 1UBR; 1UBT; 1UBU; 1WUJ; 1WUK; 1WUL; 1YQ9; 1YQW; 1YRQ; 2FRV; 3CUR; 3CUS; 3H3X; 3RGW; 3UQY; 3USC; 3USE; 4GD3; 4IUB; 4IUC; 4IUD; 4TTT; 4U9H; 4U9I; 4UE2; 4UE3; 4UE6; 4UEW
» more

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