Entry: PS00516

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General information about the entry

Entry name [info] ALKYLBASE_DNA_GLYCOS
Accession [info] PS00516
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00447

Name and characterization of the entry

Description [info] Alkylbase DNA glycosidases alkA family signature.
Pattern [info]
G-[IV]-[GK]-x-W-[ST]-[AVI]-x-[LIVMFY](2)-x-[LIVM]-x(8)-[MF]-x(2)-[ED]-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 5 in 5 different sequences
Number of true positive hits 5 in 5 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 83.33 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
5 sequences

3MG2_ECOLI  (P04395), 3MGA_BACSU  (P37878), MAG1_SCHPO  (Q92383), 
MAG2_SCHPO  (O94468), MAG_YEAST   (P22134)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

YFJP_BACSU  (O31544)

		
PDB
[Detailed view]
20 PDB

1DIZ; 1MPG; 1PVS; 3CVS; 3CVT; 3CW7; 3CWA; 3CWS; 3CWT; 3CWU; 3D4V; 3OGD; 3OH6; 3OH9; 3S6I; 4B21; 4B22; 4B23; 4B24; 4HSB
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