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Entry: PS00516

General information about the entry

Entry name [info] ALKYLBASE_DNA_GLYCOS
Accession [info] PS00516
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED; 01-DEC-2004 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00447

Name and characterization of the entry

Description [info] Alkylbase DNA glycosidases alkA family signature.
Pattern [info]
G-[IV]-[GK]-x-W-[ST]-[AVI]-x-[LIVMFY](2)-x-[LIVM]-x(8)-[MF]-x(2)-[ED]-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 5 in 5 different sequences
Number of true positive hits 5 in 5 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 83.33 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
5 sequences

3MG2_ECOLI  (P04395    ), 3MGA_BACSU  (P37878    ), MAG1_SCHPO  (Q92383    ), 
MAG2_SCHPO  (O94468    ), MAG_YEAST   (P22134    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

YFJP_BACSU  (O31544    )

		
PDB
[Detailed view]
20 PDB

1DIZ; 1MPG; 1PVS; 3CVS; 3CVT; 3CW7; 3CWA; 3CWS; 3CWT; 3CWU; 3D4V; 3OGD; 3OH6; 3OH9; 3S6I; 4B21; 4B22; 4B23; 4B24; 4HSB
» more

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