Entry: PS00531

General information about the entry
Entry name RNASE_T2_2
Accession number PS00531
Entry type PATTERN
Date DEC-1991 (CREATED); APR-2006 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00459
Associated ProRule PRU10046
Name and characterization of the entry
DescriptionRibonuclease T2 family histidine active site 2.
Pattern [LIVMF]-x(2)-[HDGTY]-[EQ]-[FYW]-x-[KRT]-H-[GA]-x-C.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 43 hits in 43 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 43 hits in 43 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 95.56 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 8,active_site
  • `Interesting' site in the pattern: 11,disulfide
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
POLG_BVDVC  (Q96662), POLG_BVDVN  (P19711), POLG_BVDVS  (Q01499), 
POLG_CSFVA  (P19712), POLG_CSFVB  (P21530), RN26_HAEIN  (P44012), 
RN28_PANGI  (P83618), RNDI_DICDI  (Q7M438), RNI_AERHY   (Q07465), 
RNI_ECOLI   (P21338), RNL2_LENED  (P81296), RNLE_SOLLC  (P80022), 
RNLX_SOLLC  (P80196), RNMC_MOMCH  (P23540), RNM_ASPSA   (P19791), 
RNOY_CRAGI  (Q7M456), RNPB_PHYPO  (P81477), RNRH_RHINI  (P08056), 
RNS1_ARATH  (P42813), RNS2_ANTHI  (Q38716), RNS2_ARATH  (P42814), 
RNS2_NICAL  (P04007), RNS2_SOLTU  (Q01796), RNS3_ARATH  (P42815), 
RNS3_PETHY  (Q40875), RNS4_ANTHI  (Q38717), RNS7_NICAL  (Q40381), 
RNT2_ASPOR  (P10281), RNT2_DANRE  (B8XY56), RNT2_HUMAN  (O00584), 
RNT2_MOUSE  (Q9CQ01), RNT2_PIG    (Q7M329), RNTR_HYPRU  (P24657), 
RNY1A_CANAL (Q5AK94), RNY1B_CANAL (Q5AKB1), RNY1_ASHGO  (Q75BW5), 
RNY1_ASPFU  (Q4WXZ5), RNY1_CANGA  (Q6FP42), RNY1_DEBHA  (Q6BHB1), 
RNY1_EMENI  (Q5B3K6), RNY1_KLULA  (Q6CRT6), RNY1_YARLI  (Q6CAV7), 
RNY1_YEAST  (Q02933)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
RNS11_NICAL (Q7SID5), RNS6_NICAL  (Q40379)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1BK7; 1BOL; 1DIX; 1J1F; 1J1G; 1UCA; 1UCC; 1UCD; 1UCG; 1V9H; 2EA1; 2PQX; 2PQY; 2Z70; 3T0O; 4DVK; 4DVL; 4DVN; 4DW3; 4DW4; 4DW5; 4DW7; 4DWA; 4DWC;

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