Entry: PS00538

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General information about the entry

Entry name [info] CHEMOTAXIS_TRANSDUC_1
Accession [info] PS00538
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); DEC-1991 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00465

Name and characterization of the entry

Description [info] Bacterial chemotaxis sensory transducers signature.
Pattern [info]
R-T-E-[EQ]-Q-x(2)-[SA]-[LIVM]-x-[EQ]-T-A-A-S-M-E-Q-L-T-A-T-V.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 8 in 8 different sequences
Number of true positive hits 8 in 8 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 43
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 15.69 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] methylation at position 4
Site [info] methylation at position 10
Site [info] methylation at position 17
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
8 sequences

MCP1_ECOLI  (P02942), MCP2_ECOLI  (P07017), MCP2_SALTY  (P02941), 
MCP3_ECOLI  (P05704), MCP4_ECOLI  (P07018), MCPC_SALTY  (Q02755), 
MCPD_ENTAK  (P21823), MCPS_ENTAK  (P21822)
» More

UniProtKB/Swiss-Prot
False negative sequences
43 sequences

ALKN_ALCBS  (Q0VTI9), ALKN_PSEOL  (Q9R9U8), BAST_HALS3  (B0R6I4), 
BDLA_PSEAE  (Q9I3S1), CAR_HALS3   (B0R9Z1), COST_HALS3  (B0R6A7), 
COST_HALSA  (Q9HP84), CTPH_PSEAE  (G3XDA3), CTPL_PSEAE  (Q9HUW6), 
HLYB_VIBCH  (P15492), HTR13_HALS3 (B0R4N9), HTR18_HALS3 (B0R474), 
HTR1_HALS3  (B0R632), HTR1_HALSA  (P0DMI3), HTR2_HALS3  (B0R6B1), 
HTR2_HALSA  (Q9HP81), HTR4_HALS3  (B0R470), HTR4_HALSA  (P0DMI4), 
HTR6_HALS3  (B0R461), HTR7_HALS3  (B0R6A6), HTR7_HALSA  (P0DMI5), 
HTR8_HALS3  (B0R5T0), MALCR_PSEAE (Q9I0I6), MCP1_THEMA  (Q9WYR0), 
MCP2_THEMA  (Q9X0M7), MCP3_THEMA  (Q9X0N0), MCPA_BACSU  (P39214), 
MCPB_BACSU  (P39215), MCPC_BACSU  (P54576), MCPS_PSEPK  (Q88E10), 
MPCT_HALS3  (B0R367), NAHY_PSEPU  (Q9Z429), PCTA_PSEAE  (G3XD24), 
PCTB_PSEAE  (Q9HW91), PCTC_PSEAE  (Q9HW93), TLPA_BACSU  (P39216), 
TLPB_BACSU  (P39217), TLPC_BACSU  (P39209), Y355_BACHK  (Q6HP15), 
Y469_BACHK  (Q6HNQ4), YFMS_BACSU  (O06477), YOAH_BACSU  (C0SP89), 
YVAQ_BACSU  (O32239)
» More

PDB
[Detailed view]
2 PDB

1QU7; 3ZX6

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