Entry: PS00538

General information about the entry

Entry name [info] CHEMOTAXIS_TRANSDUC_1
Accession [info] PS00538
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); DEC-1991 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00465

Name and characterization of the entry

Description [info] Bacterial chemotaxis sensory transducers signature.
Pattern [info]
R-T-E-[EQ]-Q-x(2)-[SA]-[LIVM]-x-[EQ]-T-A-A-S-M-E-Q-L-T-A-T-V.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 8 in 8 different sequences
Number of true positive hits 8 in 8 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 43
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 15.69 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] methylation at position 4
Site [info] methylation at position 10
Site [info] methylation at position 17
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
8 sequences

MCP1_ECOLI  (P02942    ), MCP2_ECOLI  (P07017    ), MCP2_SALTY  (P02941    ), 
MCP3_ECOLI  (P05704    ), MCP4_ECOLI  (P07018    ), MCPC_SALTY  (Q02755    ), 
MCPD_ENTAK  (P21823    ), MCPS_ENTAK  (P21822    )
» more

UniProtKB/Swiss-Prot
False negative sequences
43 sequences

ALKN_ALCBS  (Q0VTI9    ), ALKN_PSEOL  (Q9R9U8    ), BAST_HALS3  (B0R6I4    ), 
BDLA_PSEAE  (Q9I3S1    ), CAR_HALS3   (B0R9Z1    ), COST_HALS3  (B0R6A7    ), 
COST_HALSA  (Q9HP84    ), CTPH_PSEAE  (G3XDA3    ), CTPL_PSEAE  (Q9HUW6    ), 
HLYB_VIBCH  (P15492    ), HTR13_HALS3 (B0R4N9    ), HTR18_HALS3 (B0R474    ), 
HTR1_HALS3  (B0R632    ), HTR1_HALSA  (P0DMI3    ), HTR2_HALS3  (B0R6B1    ), 
HTR2_HALSA  (Q9HP81    ), HTR4_HALS3  (B0R470    ), HTR4_HALSA  (P0DMI4    ), 
HTR6_HALS3  (B0R461    ), HTR7_HALS3  (B0R6A6    ), HTR7_HALSA  (P0DMI5    ), 
HTR8_HALS3  (B0R5T0    ), MALCR_PSEAE (Q9I0I6    ), MCP1_THEMA  (Q9WYR0    ), 
MCP2_THEMA  (Q9X0M7    ), MCP3_THEMA  (Q9X0N0    ), MCPA_BACSU  (P39214    ), 
MCPB_BACSU  (P39215    ), MCPC_BACSU  (P54576    ), MCPS_PSEPK  (Q88E10    ), 
MPCT_HALS3  (B0R367    ), NAHY_PSEPU  (Q9Z429    ), PCTA_PSEAE  (G3XD24    ), 
PCTB_PSEAE  (Q9HW91    ), PCTC_PSEAE  (Q9HW93    ), TLPA_BACSU  (P39216    ), 
TLPB_BACSU  (P39217    ), TLPC_BACSU  (P39209    ), Y355_BACHK  (Q6HP15    ), 
Y469_BACHK  (Q6HNQ4    ), YFMS_BACSU  (O06477    ), YOAH_BACSU  (C0SP89    ), 
YVAQ_BACSU  (O32239    )
» more

PDB
[Detailed view]
2 PDB

1QU7; 3ZX6

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