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Entry: PS00540

General information about the entry

Entry name [info] FERRITIN_1
Accession [info] PS00540
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED; 01-JUN-1992 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00181

Name and characterization of the entry

Description [info] Ferritin iron-binding regions signature 1.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.

Total number of hits 44 in 44 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 24
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 64.71 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] metal(?) at position 1
Site [info] metal(?) at position 4
Site [info] metal(?) at position 6
Version [info] 1

Cross-references [info]

True positive sequences
44 sequences

FRI1_BRANA  (Q96540    ), FRI1_LITCT  (P07229    ), FRI1_MAIZE  (P29036    ), 
FRI1_PEA    (P19975    ), FRI1_SOYBN  (P19976    ), FRI1_TOBAC  (Q8RX97    ), 
FRI2_LITCT  (P07798    ), FRI2_MAIZE  (P29390    ), FRI3_LITCT  (P07797    ), 
FRI3_VIGUN  (O65100    ), FRI4_ARATH  (Q9S756    ), FRIH2_SCHMA (P25320    ), 
FRIH3_XENLA (Q7SXA6    ), FRIHA_XENLA (P49948    ), FRIHB_XENLA (P17663    ), 
FRIH_BOVIN  (O46414    ), FRIH_CANLF  (Q95MP7    ), FRIH_CHICK  (P08267    ), 
FRIH_CRIGR  (P29389    ), FRIH_FELCA  (Q2MHN2    ), FRIH_HORSE  (Q8MIP0    ), 
FRIH_HUMAN  (P02794    ), FRIH_MOUSE  (P09528    ), FRIH_PONAB  (Q5R8J7    ), 
FRIH_PSEBE  (P85838    ), FRIH_RABIT  (P25915    ), FRIH_RAT    (P19132    ), 
FRIH_SALSA  (P49946    ), FRIH_TRENE  (P85837    ), FRIH_TRIVU  (Q9XT73    ), 
FRIL1_MOUSE (P29391    ), FRIL1_RAT   (P02793    ), FRIL2_MOUSE (P49945    ), 
FRIL_BOVIN  (O46415    ), FRIL_CANLF  (Q53VB8    ), FRIL_FELCA  (Q2MHN1    ), 
FRIL_HORSE  (P02791    ), FRIL_HUMAN  (P02792    ), FRIL_PONAB  (Q5R538    ), 
FRIL_RABIT  (P09451    ), FRIS_LYMST  (P42577    ), FRI_MALBX   (Q94FY2    ), 
FRI_PHAVU   (P25699    ), FTMT_MOUSE  (Q9D5H4    )
» more

False negative sequences
24 sequences

FHL17_HUMAN (Q9BXU8    ), FHL17_MOUSE (Q99MX2    ), FHL19_HUMAN (P0C7X4    ), 
FRI1_ARATH  (Q39101    ), FRI2_ARATH  (Q9SRL5    ), FRI2_SOYBN  (Q94IC4    ), 
FRI2_TOBAC  (Q8H1T3    ), FRI2_VIGUN  (Q41709    ), FRI3_ARATH  (Q9LYN2    ), 
FRI3_SOYBN  (Q948P6    ), FRI4_SOYBN  (Q948P5    ), FRIH1_SCHMA (P25319    ), 
FRIH_ECHGR  (O46119    ), FRIH_PIG    (P19130    ), FRIH_SHEEP  (P18685    ), 
FRIL_XENLA  (Q7SXA5    ), FRIML_PSEBE (P85836    ), FRIMS_PSEBE (P85839    ), 
FRIM_TRENE  (P85835    ), FRIY_LYMST  (P42578    ), FRI_AEDAE   (P41822    ), 
FRI_PACLE   (Q26061    ), FTMT_BOVIN  (Q2YDI9    ), FTMT_HUMAN  (Q8N4E7    )
» more

'Partial' sequences
4 sequences

FRI2_PEA    (P83445    ), FRIH_ANAPL  (P80145    ), FRIL_PIG    (P19133    ), 
FRIL_SHEEP  (P18686    )
» more

[Detailed view]
116 PDB

1AEW; 1BG7; 1DAT; 1FHA; 1GWG; 1H96; 1HRS; 1IER; 1IES; 1LB3; 1MFR; 1RCD; 1RCG; 1RCI; 1XZ1; 1XZ3; 2CEI; 2CHI; 2CIH; 2CLU; 2CN6; 2CN7; 2FFX; 2FG4; 2FG8; 2FHA; 2G4H; 2GYD; 2IU2; 2V2I; 2V2J; 2W0O; 2Z5P; 2Z5Q; 2Z5R; 2ZA6; 2ZA7; 2ZA8; 2ZG7; 2ZG8; 2ZG9; 2ZUR; 3AF7; 3AF8; 3AF9; 3AJO; 3AJP; 3AJQ; 3F32; 3F33; 3F34; 3F35; 3F36; 3F37; 3F38; 3F39; 3FI6; 3H7G; 3KA3; 3KA4; 3KA6; 3KA8; 3KA9; 3KXU; 3NOZ; 3NP0; 3NP2; 3O7R; 3O7S; 3RAV; 3RBC; 3RD0; 3RE7; 3RGD; 3SH6; 3SHX; 3U90; 3WNW; 3WVU; 3WVV; 3WVW; 4DAS; 4DE6; 4LPJ; 4LPM; 4LPN; 4LQH; 4LQJ; 4LQN; 4LQV; 4LYU; 4LYX; 4MJY; 4MKU; 4ML5; 4MN9; 4MY7; 4OYN; 4P18; 4V1W; 4Y08; 4YKH; 4Z3B; 4ZJK; 5AXS; 5CMQ; 5CMR; 5CZU; 5E1U; 5E2D; 5ERJ; 5ERK; 5HQO; 5IX6; 5JKL; 5JKM
» more

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