Entry: PS00540

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General information about the entry

Entry name [info] FERRITIN_1
Accession [info] PS00540
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); JUN-1992 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00181

Name and characterization of the entry

Description [info] Ferritin iron-binding regions signature 1.
Pattern [info]
E-x-[KR]-E-x(2)-E-[KR]-[LF]-[LIVMA]-x(2)-Q-N-x-R-x-G-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 44 in 44 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 24
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 64.71 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] metal(?) at position 1
Site [info] metal(?) at position 4
Site [info] metal(?) at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
44 sequences

FRI1_BRANA  (Q96540), FRI1_LITCT  (P07229), FRI1_MAIZE  (P29036), 
FRI1_PEA    (P19975), FRI1_SOYBN  (P19976), FRI1_TOBAC  (Q8RX97), 
FRI2_LITCT  (P07798), FRI2_MAIZE  (P29390), FRI3_LITCT  (P07797), 
FRI3_VIGUN  (O65100), FRI4_ARATH  (Q9S756), FRIH2_SCHMA (P25320), 
FRIH3_XENLA (Q7SXA6), FRIHA_XENLA (P49948), FRIHB_XENLA (P17663), 
FRIH_BOVIN  (O46414), FRIH_CANFA  (Q95MP7), FRIH_CHICK  (P08267), 
FRIH_CRIGR  (P29389), FRIH_FELCA  (Q2MHN2), FRIH_HORSE  (Q8MIP0), 
FRIH_HUMAN  (P02794), FRIH_MOUSE  (P09528), FRIH_PONAB  (Q5R8J7), 
FRIH_RABIT  (P25915), FRIH_RAT    (P19132), FRIH_SALSA  (P49946), 
FRIH_TREBE  (P85838), FRIH_TRENE  (P85837), FRIH_TRIVU  (Q9XT73), 
FRIL1_MOUSE (P29391), FRIL1_RAT   (P02793), FRIL2_MOUSE (P49945), 
FRIL_BOVIN  (O46415), FRIL_CANFA  (Q53VB8), FRIL_FELCA  (Q2MHN1), 
FRIL_HORSE  (P02791), FRIL_HUMAN  (P02792), FRIL_PONAB  (Q5R538), 
FRIL_RABIT  (P09451), FRIS_LYMST  (P42577), FRI_MALBX   (Q94FY2), 
FRI_PHAVU   (P25699), FTMT_MOUSE  (Q9D5H4)
» More

UniProtKB/Swiss-Prot
False negative sequences
24 sequences

FHL17_HUMAN (Q9BXU8), FHL17_MOUSE (Q99MX2), FHL19_HUMAN (P0C7X4), 
FRI1_ARATH  (Q39101), FRI2_ARATH  (Q9SRL5), FRI2_SOYBN  (Q94IC4), 
FRI2_TOBAC  (Q8H1T3), FRI2_VIGUN  (Q41709), FRI3_ARATH  (Q9LYN2), 
FRI3_SOYBN  (Q948P6), FRI4_SOYBN  (Q948P5), FRIH1_SCHMA (P25319), 
FRIH_ECHGR  (O46119), FRIH_PIG    (P19130), FRIH_SHEEP  (P18685), 
FRIL_XENLA  (Q7SXA5), FRIML_TREBE (P85836), FRIMS_TREBE (P85839), 
FRIM_TRENE  (P85835), FRIY_LYMST  (P42578), FRI_AEDAE   (P41822), 
FRI_PACLE   (Q26061), FTMT_BOVIN  (Q2YDI9), FTMT_HUMAN  (Q8N4E7)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

FRI2_PEA    (P83445), FRIH_ANAPL  (P80145), FRIL_PIG    (P19133), 
FRIL_SHEEP  (P18686)
» More

PDB
[Detailed view]
82 PDB

1AEW; 1BG7; 1DAT; 1FHA; 1GWG; 1H96; 1HRS; 1IER; 1IES; 1LB3; 1MFR; 1RCD; 1RCG; 1RCI; 1XZ1; 1XZ3; 2CEI; 2CHI; 2CIH; 2CLU; 2CN6; 2CN7; 2FFX; 2FG4; 2FG8; 2FHA; 2G4H; 2GYD; 2IU2; 2V2I; 2V2J; 2W0O; 2Z5P; 2Z5Q; 2Z5R; 2ZA6; 2ZA7; 2ZA8; 2ZG7; 2ZG8; 2ZG9; 2ZUR; 3AF7; 3AF8; 3AF9; 3AJO; 3AJP; 3AJQ; 3F32; 3F33; 3F34; 3F35; 3F36; 3F37; 3F38; 3F39; 3FI6; 3H7G; 3HX2; 3HX5; 3HX7; 3KA3; 3KA4; 3KA6; 3KA8; 3KA9; 3KXU; 3NOZ; 3NP0; 3NP2; 3O7R; 3O7S; 3RAV; 3RBC; 3RD0; 3RE7; 3RGD; 3SH6; 3SHX; 3U90; 4DAS; 4DE6
» More

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