Entry: PS00549

General information about the entry
Entry name BACTERIOFERRITIN
Accession number PS00549
Entry type PATTERN
Date DEC-1991 (CREATED); DEC-2001 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00475
Name and characterization of the entry
DescriptionBacterioferritin signature.
Pattern <M-x-G-x(3)-[IV]-[LIV]-x(2)-[LM]-x(3)-L-x(3)-L.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 30 hits in 30 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 27 hits in 27 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 3 hits in 3 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 90.00 %
  • Recall (true hits / (true hits + false negatives)): 96.43 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
BFR1_MAGMG  (O50171), BFR2_MAGMG  (O50172), BFRA_NEIGO  (P0A0R2), 
BFRA_NEIMA  (P56998), BFRA_NEIMB  (P0A0R1), BFRB_NEIGO  (P77914), 
BFRB_NEIMA  (P63699), BFRB_NEIMB  (P63700), BFRL_ABSSP  (Q10986), 
BFR_AZOVI   (P22759), BFR_BRUME   (P49944), BFR_BRUSU   (Q8FW95), 
BFR_ECOL6   (P0ABD4), BFR_ECOLI   (P0ABD3), BFR_MYCAV   (P43314), 
BFR_MYCBO   (P63698), BFR_MYCLE   (P43315), BFR_MYCPA   (P45430), 
BFR_MYCTU   (P63697), BFR_NITWI   (P13570), BFR_PSEAE   (Q9HWF9), 
BFR_PSEPU   (P77930), BFR_RHOCA   (Q59738), BFR_SALTY   (O68926), 
BFR_SERMA   (O68935), BFR_STRCO   (Q9S2N0), BFR_SYNY3   (P24602)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
BFR_DESDA   (Q93PP9)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
BFRH_ABSSP  (Q10985)
False positive hits (sequences which do not belong to the set under consideration):
C724B_ORYSJ (Q6F4F5), XYND_ASPFN  (B8MYV0), XYND_ASPOR  (Q2UR38)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1BCF; 1BFR; 1JGC; 1SOF; 2FKZ; 2FL0; 2HTN; 2VXI; 2Y3Q; 3E1J; 3E1L; 3E1M; 3E1N; 3E1O; 3E1P; 3E1Q; 3E2C; 3GHQ; 3QB9; 3R2H; 3R2K; 3R2L; 3R2M; 3R2O; 3R2R; 3R2S; 3UOF; 3UOI;

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