![]() |
|
|||||||
| Entry: PS00552 |
| General information about the entry | |
|---|---|
| Entry name | HTH_MERR_1 |
| Accession number | PS00552 |
| Entry type | PATTERN |
| Date | DEC-1991 (CREATED); NOV-1995 (DATA UPDATE); DEC-2011 (INFO UPDATE). |
| PROSITE Documentation | PDOC00477 |
| Name and characterization of the entry | |
| Description | MerR-type HTH domain signature. |
| Pattern | [GSA]-x-[LIVMFA]-[ASM]-x(2)-[STACLIV]-[GSDENQR]-[LIVC]-[STANHK]-x(3)- [LIVM]-[RHF]-x-[YW]-[DEQ]-x(2,3)-[GHDNQ]-[LIVMF](2). |
| Numerical results | |
| |
| Comments | |
| |
| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:BLTR_BACSU (P39842), BMRR_BACSU (P39075), CUER_ECO57 (Q8XD09), CUER_ECOL6 (Q8FK74), CUER_ECOLI (P0A9G4), CUER_SALTI (Q8Z8S3), CUER_SALTY (Q93CH6), CUER_SHIFL (P0A9G5), CUER_VIBC3 (A5F2W6), CUER_VIBCH (P0C6D2), GLNR_BACAN (P62172), GLNR_BACCE (P62173), GLNR_BACCR (P62174), GLNR_BACSU (P37582), HMRR2_RHIME (P58379), HMRR_SINMW (Q9X5X4), HSPR_STRCO (P40183), MERR_BACCE (P22853), MERR_PSEAI (P0A183), MERR_PSEFL (P0A184), MERR_PSESP (P69413), MERR_SALTI (P0A2Q8), MERR_SERMA (P13111), MERR_SHIFL (P0A2Q9), MERR_STAAU (P22874), MERR_THIFE (P22896), MLRA_ECOLI (P33358), MLRA_SALTS (E1WH94), MLRA_SALTY (P0CL12), NOLA_BRAEL (P50329), NOLA_BRAJA (P22537), NOLA_BRASN (P50330), SOXR_CHRVO (Q9ZHI4), SOXR_ECO57 (P0ACS3), SOXR_ECOLI (P0ACS2), SOXR_PSEAE (Q51506), SOXR_SALTI (P0A2R1), SOXR_SALTY (P0A2R0), SOXR_SHIFL (P0ACS4), TIPA_STRCO (P0A4T8), TIPA_STRLI (P0A4T9), Y186_HAEIN (P44558), Y293_HAEIN (P44617), YCGE_ECOLI (P75989), YYAN_BACSU (P37510), ZNTR_ECO57 (P0ACS6), ZNTR_ECOLI (P0ACS5), ZNTR_HAEIN (P45277)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): ADHR_BACSU (O06008), CUER_BACSU (O07586), CUER_YERPE (Q8ZCA8), HMMR_RHILV (Q9X5V4), HMRR1_RHIME (P58378), MERD_ACICA (Q52110), MERD_ENTAG (P0A2Q7), MERD_PSEAI (P06689), MERD_PSEFL (Q51773), MERD_SALTI (P0A2Q6), MERD_SERMA (P08654), MERD_SHIFL (P20102), MTA_BACSU (P71039), SKGA_CAUCN (B8H172), SKGA_CAUCR (P0CAV4), TNRA_BACSU (Q45666), Y1828_MYCTU (P67669), Y1830_MYCTU (P67671), Y1859_MYCBO (P67670), Y1861_MYCBO (P67672), Y4778_PSEAE (Q9HV30), Y603_AQUAE (O66861), Y701_SYNY3 (Q55963), YDFL_BACSU (P96690), YFMP_BACSU (O06474), YHI4_RHOCA (P30791)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
|
| PDB [Detailed view] | 1EXI; 1EXJ; 1Q05; 1Q06; 1Q07; 1R8E; 2VZ4; 2ZHG; 2ZHH; 3D6Y; 3D6Z; 3D71; 3IAO; 3Q1M; 3Q2Y; 3Q3D; 3Q5P; 3Q5R; 3Q5S; |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission